Cow genome map


           Conread name:
           Ss1.1-rnco1924b_c4.5
        

               Conread position:
               1-164
               

               Cow position:
               chr18:24663579-24663742 (view UCSC Genome Browser custom track)
               

               Alignm length:
               164
               

               Alignm identity:
               158
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               156-279
               

               Cow position:
               chr18:24665758-24665880 (view UCSC Genome Browser custom track)
               

               Alignm length:
               124
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               260-428
               

               Cow position:
               chr18:24667129-24667297 (view UCSC Genome Browser custom track)
               

               Alignm length:
               169
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               422-563
               

               Cow position:
               chr18:24668350-24668491 (view UCSC Genome Browser custom track)
               

               Alignm length:
               142
               

               Alignm identity:
               131
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-746
               

               Cow position:
               chr18:24668582-24668765 (view UCSC Genome Browser custom track)
               

               Alignm length:
               185
               

               Alignm identity:
               151
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               148, 0
               

               Conread position:
               700-789
               

               Cow position:
               chr18:24669969-24670058 (view UCSC Genome Browser custom track)
               

               Alignm length:
               90
               

               Alignm identity:
               86
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               785-906
               

               Cow position:
               chr18:24670137-24670258 (view UCSC Genome Browser custom track)
               

               Alignm length:
               122
               

               Alignm identity:
               116
               

               Alignm E-value:
               5.99756e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               907-1023
               

               Cow position:
               chr18:24670847-24670962 (view UCSC Genome Browser custom track)
               

               Alignm length:
               117
               

               Alignm identity:
               111
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               34, 0
               
Show alignments to all cow chromosomes.