Cow genome map


           Conread name:
           Ss1.1-rnep11c_k21.5
        

               Conread position:
               1-421
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               372
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               48-421
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               60-421
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               184, 0
               

               Conread position:
               63-421
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               66-421
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               318
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               189-406
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               189
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               203-406
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-34
               

               Alignm gaps (pig, cow):
               62, 52
               

               Conread position:
               217-407
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               159
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               258-420
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               115
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               153, 0
               

               Conread position:
               262-406
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               109
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               265-407
               

               Cow position:
               
               

               Alignm length:
               144
               

               Alignm identity:
               107
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               265-426
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               117
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               6, 12
               

               Conread position:
               271-419
               

               Cow position:
               
               

               Alignm length:
               152
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               276-407
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               99
               

               Alignm E-value:
               5e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               276-410
               

               Cow position:
               
               

               Alignm length:
               135
               

               Alignm identity:
               100
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-407
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-407
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               104
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-407
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               101
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-410
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               100
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               70, 64
               

               Conread position:
               280-411
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               103
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               280-411
               

               Cow position:
               
               

               Alignm length:
               132
               

               Alignm identity:
               105
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               283-411
               

               Cow position:
               
               

               Alignm length:
               129
               

               Alignm identity:
               103
               

               Alignm E-value:
               3e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               388-630
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-24
               

               Alignm gaps (pig, cow):
               68, 238
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               197
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               199
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               146
               

               Alignm E-value:
               8e-26
               

               Alignm gaps (pig, cow):
               149, 153
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               52, 45
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               9e-27
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               148
               

               Alignm E-value:
               6e-23
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               403-615
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               53, 0
               
Show alignments to all cow chromosomes.