Cow genome map
Conread name: | Ss1.1-rnep11c_k21.5 |
Conread position: | 1-421 |
Cow position: | chr5:19789435-19789015 (view UCSC Genome Browser custom track) |
Alignm length: | 421 |
Alignm identity: | 372 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 48-421 |
Cow position: | chr5:19760213-19759840 (view UCSC Genome Browser custom track) |
Alignm length: | 374 |
Alignm identity: | 329 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 60-421 |
Cow position: | chr5:19686600-19686952 (view UCSC Genome Browser custom track) |
Alignm length: | 362 |
Alignm identity: | 291 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 184, 0 |
Conread position: | 63-421 |
Cow position: | chr5:19671927-19671569 (view UCSC Genome Browser custom track) |
Alignm length: | 359 |
Alignm identity: | 317 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 66-421 |
Cow position: | chr5:19768122-19768477 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 318 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 189-406 |
Cow position: | chr5:19835553-19835336 (view UCSC Genome Browser custom track) |
Alignm length: | 218 |
Alignm identity: | 189 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 203-406 |
Cow position: | chr5:19853669-19853466 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 150 |
Alignm E-value: | 6e-34 |
Alignm gaps (pig, cow): | 62, 52 |
Conread position: | 217-407 |
Cow position: | chr5:19805040-19805230 (view UCSC Genome Browser custom track) |
Alignm length: | 191 |
Alignm identity: | 159 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 258-420 |
Cow position: | chr5:20103677-20103517 (view UCSC Genome Browser custom track) |
Alignm length: | 163 |
Alignm identity: | 115 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 153, 0 |
Conread position: | 262-406 |
Cow position: | chr5:19874366-19874222 (view UCSC Genome Browser custom track) |
Alignm length: | 145 |
Alignm identity: | 109 |
Alignm E-value: | 2e-25 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 265-407 |
Cow position: | chr5:20062693-20062551 (view UCSC Genome Browser custom track) |
Alignm length: | 144 |
Alignm identity: | 107 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 6, 12 |
Conread position: | 265-426 |
Cow position: | chr5:20080113-20079951 (view UCSC Genome Browser custom track) |
Alignm length: | 164 |
Alignm identity: | 117 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 6, 12 |
Conread position: | 271-419 |
Cow position: | chr5:20123769-20123618 (view UCSC Genome Browser custom track) |
Alignm length: | 152 |
Alignm identity: | 112 |
Alignm E-value: | 2e-22 |
Alignm gaps (pig, cow): | 11, 0 |
Conread position: | 276-407 |
Cow position: | chr5:20264343-20264212 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 99 |
Alignm E-value: | 5e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 276-410 |
Cow position: | chr5:20233467-20233333 (view UCSC Genome Browser custom track) |
Alignm length: | 135 |
Alignm identity: | 100 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 280-407 |
Cow position: | chr5:19891482-19891355 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 280-407 |
Cow position: | chr5:19903142-19903015 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 104 |
Alignm E-value: | 1e-28 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 280-407 |
Cow position: | chr5:20026466-20026339 (view UCSC Genome Browser custom track) |
Alignm length: | 128 |
Alignm identity: | 101 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 280-410 |
Cow position: | chr5:20323018-20322888 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 100 |
Alignm E-value: | 5e-21 |
Alignm gaps (pig, cow): | 70, 64 |
Conread position: | 280-411 |
Cow position: | chr5:19974464-19974333 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 103 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 280-411 |
Cow position: | chr5:19990346-19990215 (view UCSC Genome Browser custom track) |
Alignm length: | 132 |
Alignm identity: | 105 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 283-411 |
Cow position: | chr5:20009190-20009062 (view UCSC Genome Browser custom track) |
Alignm length: | 129 |
Alignm identity: | 103 |
Alignm E-value: | 3e-27 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 388-630 |
Cow position: | chr5:20101350-20101103 (view UCSC Genome Browser custom track) |
Alignm length: | 249 |
Alignm identity: | 165 |
Alignm E-value: | 7e-24 |
Alignm gaps (pig, cow): | 68, 238 |
Conread position: | 403-615 |
Cow position: | chr5:19687701-19687913 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 193 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 403-615 |
Cow position: | chr5:19758651-19758439 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 403-615 |
Cow position: | chr5:19769196-19769408 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 403-615 |
Cow position: | chr5:19787435-19787223 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 403-615 |
Cow position: | chr5:19807704-19807916 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 197 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 403-615 |
Cow position: | chr5:19833638-19833426 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 199 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 403-615 |
Cow position: | chr5:19852264-19852052 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 146 |
Alignm E-value: | 8e-26 |
Alignm gaps (pig, cow): | 149, 153 |
Conread position: | 403-615 |
Cow position: | chr5:19872573-19872361 (view UCSC Genome Browser custom track) |
Alignm length: | 213 |
Alignm identity: | 147 |
Alignm E-value: | 4e-29 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 403-615 |
Cow position: | chr5:19889019-19888807 (view UCSC Genome Browser custom track) |
Alignm length: | 215 |
Alignm identity: | 151 |
Alignm E-value: | 3e-28 |
Alignm gaps (pig, cow): | 52, 45 |
Conread position: | 403-615 |
Cow position: | chr5:20060092-20059874 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 152 |
Alignm E-value: | 9e-27 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 403-615 |
Cow position: | chr5:20079378-20079160 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 148 |
Alignm E-value: | 6e-23 |
Alignm gaps (pig, cow): | 53, 0 |
Conread position: | 403-615 |
Cow position: | chr5:20122385-20122167 (view UCSC Genome Browser custom track) |
Alignm length: | 219 |
Alignm identity: | 151 |
Alignm E-value: | 3e-26 |
Alignm gaps (pig, cow): | 53, 0 |
Show alignments to all cow chromosomes.