Cow genome map


           Conread name:
           Ss1.1-rnep13c_g15.5
        

               Conread position:
               55-334
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               197, 25
               

               Conread position:
               58-520
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               310
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 5
               

               Conread position:
               60-460
               

               Cow position:
               
               

               Alignm length:
               433
               

               Alignm identity:
               306
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               22, 16
               

               Conread position:
               60-504
               

               Cow position:
               
               

               Alignm length:
               458
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               106, 140
               

               Conread position:
               60-520
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               126, 164
               

               Conread position:
               62-460
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               296
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 132
               

               Conread position:
               70-528
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               328
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 6
               

               Conread position:
               73-300
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               166
               

               Alignm E-value:
               7e-35
               

               Alignm gaps (pig, cow):
               180, 10
               

               Conread position:
               73-359
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               217
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               73-427
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               11, 21
               

               Conread position:
               73-459
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               275
               

               Alignm E-value:
               4.00001e-40
               

               Alignm gaps (pig, cow):
               93, 220
               

               Conread position:
               80-461
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               272
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               98, 318
               

               Conread position:
               84-436
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               278
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               83, 89
               

               Conread position:
               88-427
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               269
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               79, 327
               

               Conread position:
               88-427
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               276
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 324
               

               Conread position:
               88-427
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               259
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 141
               

               Conread position:
               88-460
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               282
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               78, 112
               

               Conread position:
               88-474
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               308
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 112
               

               Conread position:
               95-427
               

               Cow position:
               
               

               Alignm length:
               334
               

               Alignm identity:
               250
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               310, 129
               

               Conread position:
               95-459
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               260
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               113, 100
               

               Conread position:
               95-516
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 305
               

               Conread position:
               114-516
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               309
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               36, 89
               

               Conread position:
               122-516
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               279
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 80
               

               Conread position:
               127-516
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               292
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               32, 24
               

               Conread position:
               128-516
               

               Cow position:
               
               

               Alignm length:
               411
               

               Alignm identity:
               286
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 51
               

               Conread position:
               137-516
               

               Cow position:
               
               

               Alignm length:
               408
               

               Alignm identity:
               291
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 42
               

               Conread position:
               155-427
               

               Cow position:
               
               

               Alignm length:
               281
               

               Alignm identity:
               218
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 89
               

               Conread position:
               155-436
               

               Cow position:
               
               

               Alignm length:
               292
               

               Alignm identity:
               223
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 89
               

               Conread position:
               170-501
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               83, 74
               

               Conread position:
               174-353
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               174-353
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               78, 68
               

               Conread position:
               218-396
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               148
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               220-516
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               214
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               39, 163
               

               Conread position:
               220-516
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               236
               

               Alignm E-value:
               4.99997e-41
               

               Alignm gaps (pig, cow):
               58, 115
               

               Conread position:
               220-520
               

               Cow position:
               
               

               Alignm length:
               305
               

               Alignm identity:
               208
               

               Alignm E-value:
               4e-39
               

               Alignm gaps (pig, cow):
               69, 144
               

               Conread position:
               241-457
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-39
               

               Alignm gaps (pig, cow):
               165, 156
               

               Conread position:
               245-427
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               164
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               76, 153
               

               Conread position:
               353-519
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               145
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               8, 15
               

               Conread position:
               371-516
               

               Cow position:
               
               

               Alignm length:
               146
               

               Alignm identity:
               118
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               373-514
               

               Cow position:
               
               

               Alignm length:
               145
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               398-520
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               97
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               398-528
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               118
               

               Alignm E-value:
               5e-21
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.