Cow genome map
| Conread name: | Ss1.1-rnep14c_j20.5 |
| Conread position: | 1-435 |
| Cow position: | chr26:26236808-26236343 (view UCSC Genome Browser custom track) |
| Alignm length: | 468 |
| Alignm identity: | 335 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 89, 401 |
| Conread position: | 1-462 |
| Cow position: | chr26:26204603-26204145 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 309 |
| Alignm E-value: | 4.99983e-42 |
| Alignm gaps (pig, cow): | 140, 115 |
| Conread position: | 1-479 |
| Cow position: | chr26:26187369-26186900 (view UCSC Genome Browser custom track) |
| Alignm length: | 494 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 55 |
| Conread position: | 1-479 |
| Cow position: | chr26:26193559-26193099 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 325 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 87, 109 |
| Conread position: | 1-479 |
| Cow position: | chr26:26213900-26213418 (view UCSC Genome Browser custom track) |
| Alignm length: | 505 |
| Alignm identity: | 376 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 57 |
| Conread position: | 1-485 |
| Cow position: | chr26:26247744-26247233 (view UCSC Genome Browser custom track) |
| Alignm length: | 514 |
| Alignm identity: | 372 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 27, 38 |
| Conread position: | 1-535 |
| Cow position: | chr26:26176674-26176140 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 434 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 50, 326 |
| Conread position: | 2-336 |
| Cow position: | chr26:26213635-26213269 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 291 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 336 |
| Conread position: | 2-479 |
| Cow position: | chr26:26236621-26236152 (view UCSC Genome Browser custom track) |
| Alignm length: | 487 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 134 |
| Conread position: | 2-535 |
| Cow position: | chr26:26204431-26203916 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 392 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 64, 113 |
| Conread position: | 3-479 |
| Cow position: | chr26:26220231-26219751 (view UCSC Genome Browser custom track) |
| Alignm length: | 488 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 99, 291 |
| Conread position: | 5-462 |
| Cow position: | chr26:26187335-26186875 (view UCSC Genome Browser custom track) |
| Alignm length: | 472 |
| Alignm identity: | 348 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 5-462 |
| Cow position: | chr26:26193525-26193056 (view UCSC Genome Browser custom track) |
| Alignm length: | 479 |
| Alignm identity: | 338 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 55 |
| Conread position: | 5-535 |
| Cow position: | chr26:26163160-26162639 (view UCSC Genome Browser custom track) |
| Alignm length: | 548 |
| Alignm identity: | 442 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 61, 53 |
| Conread position: | 5-535 |
| Cow position: | chr26:26236588-26236054 (view UCSC Genome Browser custom track) |
| Alignm length: | 549 |
| Alignm identity: | 385 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 23, 34 |
| Conread position: | 31-535 |
| Cow position: | chr26:26247524-26246991 (view UCSC Genome Browser custom track) |
| Alignm length: | 545 |
| Alignm identity: | 401 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 37, 7 |
| Conread position: | 32-305 |
| Cow position: | chr26:26213914-26213641 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 221 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 86, 115 |
| Conread position: | 32-437 |
| Cow position: | chr26:26247758-26247341 (view UCSC Genome Browser custom track) |
| Alignm length: | 428 |
| Alignm identity: | 306 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 139, 297 |
| Conread position: | 32-462 |
| Cow position: | chr26:26193573-26193149 (view UCSC Genome Browser custom track) |
| Alignm length: | 438 |
| Alignm identity: | 290 |
| Alignm E-value: | 1.99965e-42 |
| Alignm gaps (pig, cow): | 90, 74 |
| Conread position: | 32-462 |
| Cow position: | chr26:26220340-26219891 (view UCSC Genome Browser custom track) |
| Alignm length: | 457 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 90, 85 |
| Conread position: | 34-479 |
| Cow position: | chr26:26193385-26192946 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 333 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 34, 24 |
| Conread position: | 34-479 |
| Cow position: | chr26:26213714-26213252 (view UCSC Genome Browser custom track) |
| Alignm length: | 471 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 54 |
| Conread position: | 34-535 |
| Cow position: | chr26:26220170-26219653 (view UCSC Genome Browser custom track) |
| Alignm length: | 522 |
| Alignm identity: | 345 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 65, 54 |
| Conread position: | 61-441 |
| Cow position: | chr26:26213915-26213529 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 267 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 61, 56 |
| Conread position: | 64-479 |
| Cow position: | chr26:26204444-26204035 (view UCSC Genome Browser custom track) |
| Alignm length: | 417 |
| Alignm identity: | 316 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 64-535 |
| Cow position: | chr26:26213648-26213154 (view UCSC Genome Browser custom track) |
| Alignm length: | 500 |
| Alignm identity: | 340 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 42 |
| Conread position: | 83-262 |
| Cow position: | chr26:26193063-26192884 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 78, 68 |
| Conread position: | 127-305 |
| Cow position: | chr26:26204615-26204437 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 148 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 127-485 |
| Cow position: | chr26:26247756-26247407 (view UCSC Genome Browser custom track) |
| Alignm length: | 362 |
| Alignm identity: | 280 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 108, 61 |
| Conread position: | 129-441 |
| Cow position: | chr26:26236788-26236473 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 220 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 69, 133 |
| Conread position: | 154-535 |
| Cow position: | chr26:26193208-26192827 (view UCSC Genome Browser custom track) |
| Alignm length: | 388 |
| Alignm identity: | 288 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 142, 132 |
| Conread position: | 229-535 |
| Cow position: | chr26:26187015-26186718 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 230 |
| Alignm E-value: | 2.00386e-43 |
| Alignm gaps (pig, cow): | 100, 41 |
| Conread position: | 280-479 |
| Cow position: | chr26:26187381-26187182 (view UCSC Genome Browser custom track) |
| Alignm length: | 204 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 164, 147 |
| Conread position: | 282-428 |
| Cow position: | chr26:26204583-26204437 (view UCSC Genome Browser custom track) |
| Alignm length: | 147 |
| Alignm identity: | 130 |
| Alignm E-value: | 7.00649e-45 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 314-537 |
| Cow position: | chr26:26172980-26173180 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 37, 55 |
| Conread position: | 430-535 |
| Cow position: | chr26:26233038-26232933 (view UCSC Genome Browser custom track) |
| Alignm length: | 106 |
| Alignm identity: | 99 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.