Cow genome map


           Conread name:
           Ss1.1-rnep19c_k15.5
        

               Conread position:
               1-487
               

               Cow position:
               
               

               Alignm length:
               487
               

               Alignm identity:
               424
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               34-487
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               351
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               170, 0
               

               Conread position:
               38-479
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               302
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 32
               

               Conread position:
               38-487
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               176, 46
               

               Conread position:
               271-483
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               160, 172
               

               Conread position:
               271-487
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               141, 0
               

               Conread position:
               273-367
               

               Cow position:
               
               

               Alignm length:
               95
               

               Alignm identity:
               81
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               273-403
               

               Cow position:
               
               

               Alignm length:
               131
               

               Alignm identity:
               104
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               481-568
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               562-724
               

               Cow position:
               
               

               Alignm length:
               163
               

               Alignm identity:
               144
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               563-727
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               119
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-724
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-732
               

               Cow position:
               
               

               Alignm length:
               168
               

               Alignm identity:
               133
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               158, 0
               

               Conread position:
               570-724
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               126
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               570-724
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               113
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               722-885
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               115
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               722-885
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               150
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               722-885
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               151
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               722-885
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               722-885
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               149
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               753-885
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               105
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               884-1007
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               117
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               884-1007
               

               Cow position:
               
               

               Alignm length:
               124
               

               Alignm identity:
               98
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               884-1011
               

               Cow position:
               
               

               Alignm length:
               128
               

               Alignm identity:
               97
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1223
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1225
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1229
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               209
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1229
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1011-1229
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               207
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1229
               

               Cow position:
               
               

               Alignm length:
               220
               

               Alignm identity:
               165
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               213, 0
               

               Conread position:
               1278-1500
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               192
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               160, 147
               
Show alignments to all cow chromosomes.