Cow genome map


           Conread name:
           Ss1.1-rnep19c_k15.5
        

               Conread position:
               96-396
               

               Cow position:
               
               

               Alignm length:
               304
               

               Alignm identity:
               211
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               148, 8
               

               Conread position:
               205-403
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               269-404
               

               Cow position:
               
               

               Alignm length:
               136
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               269-427
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               271-403
               

               Cow position:
               
               

               Alignm length:
               133
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-35
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               272-427
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               283-416
               

               Cow position:
               
               

               Alignm length:
               134
               

               Alignm identity:
               117
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               556-724
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               564-724
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               125
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               565-724
               

               Cow position:
               
               

               Alignm length:
               161
               

               Alignm identity:
               115
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               567-724
               

               Cow position:
               
               

               Alignm length:
               159
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               567-724
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-724
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               114
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-724
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               117
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-742
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               567-788
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               158
               

               Alignm E-value:
               8e-34
               

               Alignm gaps (pig, cow):
               173, 0
               

               Conread position:
               570-724
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               577-727
               

               Cow position:
               
               

               Alignm length:
               151
               

               Alignm identity:
               108
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               585-724
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               113
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               585-724
               

               Cow position:
               
               

               Alignm length:
               140
               

               Alignm identity:
               112
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               598-772
               

               Cow position:
               
               

               Alignm length:
               176
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               144, 139
               

               Conread position:
               722-876
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               114
               

               Alignm E-value:
               7e-23
               

               Alignm gaps (pig, cow):
               27, 18
               

               Conread position:
               722-876
               

               Cow position:
               
               

               Alignm length:
               156
               

               Alignm identity:
               113
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               33, 17
               

               Conread position:
               1011-1226
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               143
               

               Alignm E-value:
               8e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1226
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               150
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               21, 29
               

               Conread position:
               1011-1226
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1226
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               147
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               1011-1226
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               1011-1226
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-26
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               1011-1226
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               146
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               49, 53
               

               Conread position:
               1011-1228
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1011-1231
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               151
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1018-1226
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               115, 105
               

               Conread position:
               1019-1220
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               96, 92
               

               Conread position:
               1021-1226
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               1021-1226
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               140
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.