Cow genome map


           Conread name:
           Ss1.1-rnep20c_a20.5
        

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               204
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               55, 62
               

               Conread position:
               1-310
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               202
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               55, 14
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               238
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               109, 209
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 209
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 209
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 209
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               242
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               132, 180
               

               Conread position:
               1-312
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               243
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 209
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 209
               

               Conread position:
               1-314
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               241
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 168
               

               Conread position:
               1-324
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               248
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               108, 233
               

               Conread position:
               7-324
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               229, 49
               

               Conread position:
               8-312
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               210
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               105, 95
               

               Conread position:
               8-336
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               258
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               38, 59
               

               Conread position:
               10-310
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               195
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               10-324
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               208
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               10-324
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               205
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               43, 34
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               240
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               237
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               327
               

               Alignm identity:
               232
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               138, 0
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               233
               

               Alignm E-value:
               9.94922e-44
               

               Alignm gaps (pig, cow):
               103, 93
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               235
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 78
               

               Conread position:
               10-336
               

               Cow position:
               
               

               Alignm length:
               328
               

               Alignm identity:
               234
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               88, 5
               

               Conread position:
               11-311
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               194
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               12-314
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               75, 32
               

               Conread position:
               14-316
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               208
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               42, 250
               

               Conread position:
               14-332
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               210
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               190, 59
               

               Conread position:
               15-336
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               245
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               29, 52
               

               Conread position:
               18-312
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               221
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               18-312
               

               Cow position:
               
               

               Alignm length:
               296
               

               Alignm identity:
               194
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               38, 45
               

               Conread position:
               23-312
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               23-312
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               198
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               23-312
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               197
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               23-312
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               23-324
               

               Cow position:
               
               

               Alignm length:
               303
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               37, 48
               

               Conread position:
               23-334
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               203
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               35-286
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               62, 6
               

               Conread position:
               35-324
               

               Cow position:
               
               

               Alignm length:
               290
               

               Alignm identity:
               191
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               36-312
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               197
               

               Alignm E-value:
               3.99931e-42
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               50-328
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               83, 92
               

               Conread position:
               52-324
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               192
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               96, 26
               

               Conread position:
               57-336
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               206
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               65-267
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               65-297
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               193, 83
               

               Conread position:
               65-312
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               65-312
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               182
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               72, 0
               

               Conread position:
               65-321
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               181
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 67
               

               Conread position:
               65-324
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               193
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               65-324
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               178
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               66-297
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               67-301
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               140, 0
               

               Conread position:
               67-313
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               30, 38
               

               Conread position:
               67-324
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               6, 16
               

               Conread position:
               69-312
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               50, 58
               

               Conread position:
               76-336
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               187
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               44, 52
               

               Conread position:
               82-316
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               29, 34
               

               Conread position:
               82-325
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               105, 0
               

               Conread position:
               86-296
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               147
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               142, 30
               

               Conread position:
               96-296
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               143
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               22, 126
               

               Conread position:
               97-324
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               43, 137
               

               Conread position:
               114-316
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               143
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               94, 0
               

               Conread position:
               126-296
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               126-296
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               126-296
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               126-296
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               126-296
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               102, 94
               

               Conread position:
               141-312
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               121
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               142-312
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               135
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               134, 0
               
Show alignments to all cow chromosomes.