Cow genome map


           Conread name:
           Ss1.1-rnep27c_m17.5
        

               Conread position:
               4-420
               

               Cow position:
               
               

               Alignm length:
               426
               

               Alignm identity:
               323
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               41, 376
               

               Conread position:
               211-679
               

               Cow position:
               
               

               Alignm length:
               485
               

               Alignm identity:
               360
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               199, 26
               

               Conread position:
               337-874
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               390
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 119
               

               Conread position:
               345-832
               

               Cow position:
               
               

               Alignm length:
               512
               

               Alignm identity:
               322
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               50, 76
               

               Conread position:
               350-754
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               273
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               350-797
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               302
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               350-874
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               352
               

               Alignm E-value:
               3e-39
               

               Alignm gaps (pig, cow):
               86, 179
               

               Conread position:
               350-906
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               368
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               86, 179
               

               Conread position:
               353-754
               

               Cow position:
               
               

               Alignm length:
               424
               

               Alignm identity:
               272
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               39, 91
               

               Conread position:
               353-795
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-35
               

               Alignm gaps (pig, cow):
               61, 129
               

               Conread position:
               353-797
               

               Cow position:
               
               

               Alignm length:
               457
               

               Alignm identity:
               299
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               51, 119
               

               Conread position:
               353-906
               

               Cow position:
               
               

               Alignm length:
               576
               

               Alignm identity:
               363
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               43, 8
               

               Conread position:
               354-795
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               338
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               44, 177
               

               Conread position:
               357-756
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               266
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               28, 34
               

               Conread position:
               359-642
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               198
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               79, 0
               

               Conread position:
               359-714
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               236
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               359-714
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               239
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               359-714
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               359-714
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               359-714
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               240
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               87, 117
               

               Conread position:
               359-714
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               238
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               80, 58
               

               Conread position:
               359-749
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               271
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               359-874
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               408
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               19, 32
               

               Conread position:
               360-677
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               233
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               33, 128
               

               Conread position:
               360-714
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               239
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               86, 116
               

               Conread position:
               361-754
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               28, 80
               

               Conread position:
               361-874
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               341
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               23, 80
               

               Conread position:
               362-717
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               33, 220
               

               Conread position:
               370-797
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               296
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               25, 121
               

               Conread position:
               370-917
               

               Cow position:
               
               

               Alignm length:
               574
               

               Alignm identity:
               358
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               25, 119
               

               Conread position:
               373-797
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               284
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               23, 51
               

               Conread position:
               376-874
               

               Cow position:
               
               

               Alignm length:
               510
               

               Alignm identity:
               322
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               13, 18
               

               Conread position:
               383-906
               

               Cow position:
               
               

               Alignm length:
               545
               

               Alignm identity:
               348
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               383-915
               

               Cow position:
               
               

               Alignm length:
               551
               

               Alignm identity:
               347
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               383-923
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               341
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               6, 11
               

               Conread position:
               399-738
               

               Cow position:
               
               

               Alignm length:
               349
               

               Alignm identity:
               223
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               401-906
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               323
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               39, 94
               

               Conread position:
               402-802
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               300
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               31, 22
               

               Conread position:
               432-926
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               414
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               260, 109
               

               Conread position:
               443-874
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               283
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               165, 86
               

               Conread position:
               490-797
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               212
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               66, 139
               

               Conread position:
               496-803
               

               Cow position:
               
               

               Alignm length:
               319
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               34, 58
               

               Conread position:
               548-862
               

               Cow position:
               
               

               Alignm length:
               321
               

               Alignm identity:
               249
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 14
               

               Conread position:
               550-874
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               217
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               101, 11
               

               Conread position:
               554-793
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               173
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               40, 5
               

               Conread position:
               560-756
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 151
               

               Conread position:
               567-757
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               138
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               84, 0
               

               Conread position:
               576-886
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               203
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               85, 75
               

               Conread position:
               599-914
               

               Cow position:
               
               

               Alignm length:
               323
               

               Alignm identity:
               211
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               52, 110
               

               Conread position:
               602-874
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               236
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               603-906
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               204
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 46
               

               Conread position:
               618-862
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               178
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               77, 86
               
Show alignments to all cow chromosomes.