Cow genome map


           Conread name:
           Ss1.1-rnep32c_d10.5
        

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 0
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               9, 0
               

               Conread position:
               33-387
               

               Cow position:
               
               

               Alignm length:
               358
               

               Alignm identity:
               319
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               26, 0
               

               Conread position:
               35-387
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               314
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               92-387
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               222
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               94-284
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               145
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               35, 74
               

               Conread position:
               174-387
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               181
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               174-393
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               185
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               217, 0
               

               Conread position:
               177-387
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               159
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               186-377
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               159, 13
               

               Conread position:
               187-387
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               144, 133
               

               Conread position:
               198-377
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               131
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               145, 129
               

               Conread position:
               199-377
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               137
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               146, 128
               

               Conread position:
               199-377
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               135
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               144, 128
               

               Conread position:
               199-387
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               132, 153
               

               Conread position:
               204-387
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               136, 123
               

               Conread position:
               386-472
               

               Cow position:
               
               

               Alignm length:
               87
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-472
               

               Cow position:
               
               

               Alignm length:
               87
               

               Alignm identity:
               81
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-473
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               81
               

               Alignm E-value:
               4e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-473
               

               Cow position:
               
               

               Alignm length:
               88
               

               Alignm identity:
               79
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               386-476
               

               Cow position:
               
               

               Alignm length:
               91
               

               Alignm identity:
               80
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               435-588
               

               Cow position:
               
               

               Alignm length:
               155
               

               Alignm identity:
               127
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               25, 35
               

               Conread position:
               466-588
               

               Cow position:
               
               

               Alignm length:
               123
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               467-587
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               93
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               467-587
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               92
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               467-588
               

               Cow position:
               
               

               Alignm length:
               122
               

               Alignm identity:
               93
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               468-588
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               468-588
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               109
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               468-588
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               114
               

               Alignm E-value:
               6.99949e-42
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               468-588
               

               Cow position:
               
               

               Alignm length:
               121
               

               Alignm identity:
               108
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               471-582
               

               Cow position:
               
               

               Alignm length:
               113
               

               Alignm identity:
               89
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               471-588
               

               Cow position:
               
               

               Alignm length:
               118
               

               Alignm identity:
               111
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.