Cow genome map
Conread name: | Ss1.1-rnep32c_d10.5 |
Conread position: | 1-387 |
Cow position: | chr23:547749-548138 (view UCSC Genome Browser custom track) |
Alignm length: | 390 |
Alignm identity: | 343 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 56, 0 |
Conread position: | 1-387 |
Cow position: | chr23:620895-621285 (view UCSC Genome Browser custom track) |
Alignm length: | 391 |
Alignm identity: | 344 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 9, 0 |
Conread position: | 33-387 |
Cow position: | chr23:597597-597954 (view UCSC Genome Browser custom track) |
Alignm length: | 358 |
Alignm identity: | 319 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 26, 0 |
Conread position: | 35-387 |
Cow position: | chr23:581432-581787 (view UCSC Genome Browser custom track) |
Alignm length: | 356 |
Alignm identity: | 314 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 24, 0 |
Conread position: | 92-387 |
Cow position: | chr23:516380-516678 (view UCSC Genome Browser custom track) |
Alignm length: | 299 |
Alignm identity: | 222 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 27, 0 |
Conread position: | 94-284 |
Cow position: | chr23:532384-532577 (view UCSC Genome Browser custom track) |
Alignm length: | 195 |
Alignm identity: | 145 |
Alignm E-value: | 7e-32 |
Alignm gaps (pig, cow): | 35, 74 |
Conread position: | 174-387 |
Cow position: | chr23:484692-484905 (view UCSC Genome Browser custom track) |
Alignm length: | 214 |
Alignm identity: | 181 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 174-393 |
Cow position: | chr23:472598-472818 (view UCSC Genome Browser custom track) |
Alignm length: | 221 |
Alignm identity: | 185 |
Alignm E-value: | 0 |
Alignm gaps (pig, cow): | 217, 0 |
Conread position: | 177-387 |
Cow position: | chr23:492717-492927 (view UCSC Genome Browser custom track) |
Alignm length: | 211 |
Alignm identity: | 159 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 186-377 |
Cow position: | chr23:371184-371374 (view UCSC Genome Browser custom track) |
Alignm length: | 194 |
Alignm identity: | 138 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 159, 13 |
Conread position: | 187-387 |
Cow position: | chr23:441306-441509 (view UCSC Genome Browser custom track) |
Alignm length: | 205 |
Alignm identity: | 146 |
Alignm E-value: | 2e-28 |
Alignm gaps (pig, cow): | 144, 133 |
Conread position: | 198-377 |
Cow position: | chr23:339747-339926 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 131 |
Alignm E-value: | 1e-27 |
Alignm gaps (pig, cow): | 145, 129 |
Conread position: | 199-377 |
Cow position: | chr23:318343-318521 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 137 |
Alignm E-value: | 2e-31 |
Alignm gaps (pig, cow): | 146, 128 |
Conread position: | 199-377 |
Cow position: | chr23:432113-432291 (view UCSC Genome Browser custom track) |
Alignm length: | 181 |
Alignm identity: | 135 |
Alignm E-value: | 2e-29 |
Alignm gaps (pig, cow): | 144, 128 |
Conread position: | 199-387 |
Cow position: | chr23:454533-454724 (view UCSC Genome Browser custom track) |
Alignm length: | 193 |
Alignm identity: | 135 |
Alignm E-value: | 3e-23 |
Alignm gaps (pig, cow): | 132, 153 |
Conread position: | 204-387 |
Cow position: | chr23:327544-327727 (view UCSC Genome Browser custom track) |
Alignm length: | 185 |
Alignm identity: | 136 |
Alignm E-value: | 2e-30 |
Alignm gaps (pig, cow): | 136, 123 |
Conread position: | 386-472 |
Cow position: | chr23:485707-485793 (view UCSC Genome Browser custom track) |
Alignm length: | 87 |
Alignm identity: | 81 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 386-472 |
Cow position: | chr23:622274-622360 (view UCSC Genome Browser custom track) |
Alignm length: | 87 |
Alignm identity: | 81 |
Alignm E-value: | 1e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 386-473 |
Cow position: | chr23:548334-548421 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 81 |
Alignm E-value: | 4e-26 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 386-473 |
Cow position: | chr23:581889-581976 (view UCSC Genome Browser custom track) |
Alignm length: | 88 |
Alignm identity: | 79 |
Alignm E-value: | 3e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 386-476 |
Cow position: | chr23:599691-599781 (view UCSC Genome Browser custom track) |
Alignm length: | 91 |
Alignm identity: | 80 |
Alignm E-value: | 9e-24 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 435-588 |
Cow position: | chr23:623378-623531 (view UCSC Genome Browser custom track) |
Alignm length: | 155 |
Alignm identity: | 127 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 25, 35 |
Conread position: | 466-588 |
Cow position: | chr23:485982-486104 (view UCSC Genome Browser custom track) |
Alignm length: | 123 |
Alignm identity: | 109 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 467-587 |
Cow position: | chr23:321056-321176 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 93 |
Alignm E-value: | 7e-22 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 467-587 |
Cow position: | chr23:373206-373326 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 92 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 467-588 |
Cow position: | chr23:442468-442589 (view UCSC Genome Browser custom track) |
Alignm length: | 122 |
Alignm identity: | 93 |
Alignm E-value: | 2e-21 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 468-588 |
Cow position: | chr23:474034-474154 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 111 |
Alignm E-value: | 5e-39 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 468-588 |
Cow position: | chr23:493753-493873 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 109 |
Alignm E-value: | 4e-37 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 468-588 |
Cow position: | chr23:548748-548868 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 114 |
Alignm E-value: | 6.99949e-42 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 468-588 |
Cow position: | chr23:582486-582606 (view UCSC Genome Browser custom track) |
Alignm length: | 121 |
Alignm identity: | 108 |
Alignm E-value: | 4e-36 |
Alignm gaps (pig, cow): | 0, 0 |
Conread position: | 471-582 |
Cow position: | chr23:456232-456344 (view UCSC Genome Browser custom track) |
Alignm length: | 113 |
Alignm identity: | 89 |
Alignm E-value: | 7e-21 |
Alignm gaps (pig, cow): | 83, 0 |
Conread position: | 471-588 |
Cow position: | chr23:601053-601170 (view UCSC Genome Browser custom track) |
Alignm length: | 118 |
Alignm identity: | 111 |
Alignm E-value: | 2e-40 |
Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.