Cow genome map

Conread name: Ss1.1-rnlu1823b_k24.5

Conread position: 1-163
Cow position: chr11:68592219-68592057 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 125
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 1-177
Cow position: chr11:30165711-30165535 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-173
Cow position: chr11:65431715-65431548 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 11, 0

Conread position: 2-184
Cow position: chr11:5176182-5176358 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 136
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 98, 0

Conread position: 2-184
Cow position: chr11:5264296-5264115 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 20, 54

Conread position: 2-184
Cow position: chr11:83028193-83028012 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 139
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 12, 66

Conread position: 2-185
Cow position: chr11:7651862-7652049 (view UCSC Genome Browser custom track)
Alignm length: 189
Alignm identity: 135
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 36, 21

Conread position: 2-185
Cow position: chr11:53486961-53487136 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 53, 84

Conread position: 2-195
Cow position: chr11:6319932-6320125 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 137
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 2-203
Cow position: chr11:30192377-30192178 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 142
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 106, 50

Conread position: 2-233
Cow position: chr11:63975331-63975099 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 19, 0

Conread position: 3-175
Cow position: chr11:46245660-46245837 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 4-253
Cow position: chr11:7500948-7500694 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 185
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 18, 61

Conread position: 5-283
Cow position: chr11:18852093-18851831 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 184
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 14, 0

Conread position: 6-157
Cow position: chr11:38643739-38643587 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 122, 0

Conread position: 6-185
Cow position: chr11:74152554-74152737 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 6-233
Cow position: chr11:70951061-70950840 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 13, 0

Conread position: 6-251
Cow position: chr11:30964539-30964290 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 84

Conread position: 7-184
Cow position: chr11:68570189-68570362 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 136
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 7-203
Cow position: chr11:36361447-36361641 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 171, 180

Conread position: 7-203
Cow position: chr11:80007866-80008068 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 143
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 13, 125

Conread position: 7-232
Cow position: chr11:13592934-13592706 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 166
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 16, 175

Conread position: 8-158
Cow position: chr11:8474570-8474421 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 15, 0

Conread position: 8-164
Cow position: chr11:26823304-26823148 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 102, 14

Conread position: 8-164
Cow position: chr11:38656991-38657145 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 114
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 10, 0

Conread position: 8-168
Cow position: chr11:24551584-24551425 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 116, 146

Conread position: 8-169
Cow position: chr11:64126405-64126244 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 116
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 8-172
Cow position: chr11:33271621-33271461 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 130
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 8-172
Cow position: chr11:51683409-51683246 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 123
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 106, 0

Conread position: 8-172
Cow position: chr11:56348638-56348800 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 0

Conread position: 8-175
Cow position: chr11:15881227-15881393 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 48, 0

Conread position: 8-175
Cow position: chr11:35544280-35544112 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 8-175
Cow position: chr11:36194487-36194324 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 123
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 76, 0

Conread position: 8-175
Cow position: chr11:64607053-64607230 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 130
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 97, 0

Conread position: 8-177
Cow position: chr11:2874595-2874423 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 0

Conread position: 8-177
Cow position: chr11:5559476-5559307 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-177
Cow position: chr11:5961500-5961331 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 8-177
Cow position: chr11:33374159-33373991 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 55, 0

Conread position: 8-177
Cow position: chr11:62004277-62004445 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 42, 0

Conread position: 8-179
Cow position: chr11:46314209-46314034 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 12, 0

Conread position: 8-179
Cow position: chr11:76248239-76248073 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 124
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 38, 0

Conread position: 8-184
Cow position: chr11:1980073-1980249 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 102, 11

Conread position: 8-184
Cow position: chr11:47412035-47411859 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 155, 151

Conread position: 8-184
Cow position: chr11:62742454-62742627 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 132
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 13, 85

Conread position: 8-184
Cow position: chr11:81041769-81041951 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 137
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 35, 141

Conread position: 8-185
Cow position: chr11:4621242-4621413 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 0

Conread position: 8-185
Cow position: chr11:37042168-37041989 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 15, 0

Conread position: 8-185
Cow position: chr11:83398100-83397923 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 8-201
Cow position: chr11:2084338-2084145 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 140
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 8-201
Cow position: chr11:41278380-41278187 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 146
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 0, 0

Conread position: 8-203
Cow position: chr11:36917572-36917777 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 82, 142

Conread position: 8-203
Cow position: chr11:42084480-42084676 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 147
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 83, 179

Conread position: 8-203
Cow position: chr11:46747667-46747861 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 186, 11

Conread position: 8-203
Cow position: chr11:49210624-49210822 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 140
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 89, 116

Conread position: 8-203
Cow position: chr11:79666069-79666262 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 140
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 43, 0

Conread position: 8-209
Cow position: chr11:70600635-70600835 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 11, 0

Conread position: 8-210
Cow position: chr11:21124416-21124614 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 178, 0

Conread position: 8-217
Cow position: chr11:12080036-12079822 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 146
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 89, 183

Conread position: 8-217
Cow position: chr11:25604147-25603933 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 7, 0

Conread position: 8-222
Cow position: chr11:25783907-25783693 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 54, 19

Conread position: 8-228
Cow position: chr11:23407654-23407439 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 149
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 15, 78

Conread position: 8-229
Cow position: chr11:55398957-55399175 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 151
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 14, 112

Conread position: 8-233
Cow position: chr11:15369582-15369357 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 150
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 8-233
Cow position: chr11:30894809-30895034 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 15, 92

Conread position: 8-233
Cow position: chr11:33286762-33286987 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 147
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 8-233
Cow position: chr11:62230380-62230150 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 160
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 77, 11

Conread position: 8-234
Cow position: chr11:6423207-6423436 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 196, 10

Conread position: 8-234
Cow position: chr11:50472511-50472286 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 162
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 186, 178

Conread position: 8-234
Cow position: chr11:53510304-53510531 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 45, 11

Conread position: 8-246
Cow position: chr11:5218970-5219204 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 26, 79

Conread position: 8-246
Cow position: chr11:52297029-52297264 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 176
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 16, 82

Conread position: 8-246
Cow position: chr11:62789321-62789085 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 15, 92

Conread position: 8-247
Cow position: chr11:30842830-30843063 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 10, 44

Conread position: 8-249
Cow position: chr11:2639450-2639705 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 175
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 14, 183

Conread position: 8-250
Cow position: chr11:1067246-1067489 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 172
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 212, 21

Conread position: 8-250
Cow position: chr11:56311405-56311645 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 8, 121

Conread position: 8-255
Cow position: chr11:2327882-2327635 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 162
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 63, 228

Conread position: 8-255
Cow position: chr11:6399872-6400124 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 178
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 100, 11

Conread position: 9-154
Cow position: chr11:64029073-64029218 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 112
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 102

Conread position: 9-203
Cow position: chr11:1485042-1485227 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 118, 76

Conread position: 9-209
Cow position: chr11:20234878-20234678 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 143
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 93, 80

Conread position: 9-228
Cow position: chr11:21893957-21894183 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 159
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 178

Conread position: 9-231
Cow position: chr11:62620566-62620348 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 12, 0

Conread position: 9-232
Cow position: chr11:14649119-14649343 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 150, 0

Conread position: 9-233
Cow position: chr11:38236436-38236221 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 185, 10

Conread position: 9-267
Cow position: chr11:30764684-30764425 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 200, 212

Conread position: 9-271
Cow position: chr11:55636033-55636290 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 168
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 144, 0

Conread position: 10-184
Cow position: chr11:34644847-34644673 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 139
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 93, 16

Conread position: 10-185
Cow position: chr11:86664590-86664764 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 122
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 142, 0

Conread position: 10-202
Cow position: chr11:77758569-77758760 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 137
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 12, 40

Conread position: 10-218
Cow position: chr11:15366787-15366988 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 152
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 75, 0

Conread position: 10-227
Cow position: chr11:13863910-13864129 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 156
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 24, 9

Conread position: 10-234
Cow position: chr11:48660120-48659903 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 156
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 9, 0

Conread position: 10-246
Cow position: chr11:30830430-30830660 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 170
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 9, 37

Conread position: 10-250
Cow position: chr11:1380868-1380626 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 161
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 181, 211

Conread position: 10-250
Cow position: chr11:6643005-6642764 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 204, 177

Conread position: 10-261
Cow position: chr11:36182882-36182630 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 174
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 175, 53

Conread position: 10-280
Cow position: chr11:6245512-6245240 (view UCSC Genome Browser custom track)
Alignm length: 279
Alignm identity: 195
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 75, 103

Conread position: 10-280
Cow position: chr11:59862401-59862129 (view UCSC Genome Browser custom track)
Alignm length: 275
Alignm identity: 178
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 100, 240

Conread position: 10-281
Cow position: chr11:29954559-29954295 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 179
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 183, 63

Conread position: 10-283
Cow position: chr11:42835762-42836042 (view UCSC Genome Browser custom track)
Alignm length: 288
Alignm identity: 195
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 168, 45

Conread position: 11-165
Cow position: chr11:2830846-2830694 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 0

Conread position: 11-202
Cow position: chr11:41980013-41980206 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 137
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 11, 36

Conread position: 11-232
Cow position: chr11:45435265-45435050 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 194, 47

Conread position: 13-186
Cow position: chr11:63407882-63407712 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 136
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 50, 0

Conread position: 17-233
Cow position: chr11:40608410-40608624 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 149
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 75, 6

Conread position: 18-265
Cow position: chr11:25119753-25119991 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 89, 0

Conread position: 19-157
Cow position: chr11:83042058-83042198 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 105, 0

Conread position: 19-158
Cow position: chr11:32586944-32587079 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 105
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 71, 0

Conread position: 19-158
Cow position: chr11:69035342-69035203 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 108
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 19-161
Cow position: chr11:23278971-23279116 (view UCSC Genome Browser custom track)
Alignm length: 146
Alignm identity: 113
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 19-163
Cow position: chr11:4390085-4389941 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-165
Cow position: chr11:41133898-41134042 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 108
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 86, 0

Conread position: 19-167
Cow position: chr11:1265360-1265508 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 112
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-167
Cow position: chr11:53888467-53888614 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 108
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 141, 0

Conread position: 19-167
Cow position: chr11:74427861-74427713 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 37, 45

Conread position: 19-168
Cow position: chr11:32817634-32817782 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 113
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 100, 0

Conread position: 19-168
Cow position: chr11:42498026-42497878 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 19-168
Cow position: chr11:44016427-44016278 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 118
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 0, 0

Conread position: 19-168
Cow position: chr11:63491201-63491052 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-169
Cow position: chr11:49192273-49192424 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 97, 0

Conread position: 19-172
Cow position: chr11:17369708-17369561 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 122
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 19-172
Cow position: chr11:73638037-73637885 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 111
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 128, 0

Conread position: 19-175
Cow position: chr11:66939409-66939565 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 122
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 19-176
Cow position: chr11:63695656-63695819 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 0

Conread position: 19-176
Cow position: chr11:75285574-75285733 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 19-176
Cow position: chr11:77227712-77227565 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 100, 66

Conread position: 19-177
Cow position: chr11:5486198-5486039 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 119
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 32, 64

Conread position: 19-177
Cow position: chr11:7427752-7427915 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 113, 0

Conread position: 19-177
Cow position: chr11:19657033-19657188 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 88, 0

Conread position: 19-177
Cow position: chr11:35347569-35347727 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-177
Cow position: chr11:36847351-36847193 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-177
Cow position: chr11:37099990-37100147 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 124
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 90, 0

Conread position: 19-177
Cow position: chr11:41141067-41140912 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 33, 0

Conread position: 19-177
Cow position: chr11:42064042-42064199 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 118, 0

Conread position: 19-177
Cow position: chr11:42884603-42884760 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 152, 0

Conread position: 19-177
Cow position: chr11:64077320-64077476 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 107, 0

Conread position: 19-177
Cow position: chr11:72443296-72443138 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-177
Cow position: chr11:81065868-81066024 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 0

Conread position: 19-178
Cow position: chr11:21830029-21830185 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 123
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 71, 0

Conread position: 19-179
Cow position: chr11:36300402-36300558 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 27, 0

Conread position: 19-179
Cow position: chr11:44176775-44176619 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 126
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 41, 0

Conread position: 19-179
Cow position: chr11:46010077-46010230 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 124
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 30, 0

Conread position: 19-179
Cow position: chr11:62606600-62606440 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 19-179
Cow position: chr11:64101955-64101795 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 82, 22

Conread position: 19-182
Cow position: chr11:38223611-38223767 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 19-182
Cow position: chr11:67208431-67208273 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 122
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 43, 0

Conread position: 19-182
Cow position: chr11:71303761-71303599 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 19-183
Cow position: chr11:3740146-3739973 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 130
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 83, 0

Conread position: 19-184
Cow position: chr11:5231465-5231627 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 91, 0

Conread position: 19-184
Cow position: chr11:13940369-13940204 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 94, 55

Conread position: 19-184
Cow position: chr11:20117259-20117092 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 128
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 19, 102

Conread position: 19-184
Cow position: chr11:26442321-26442486 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 19-184
Cow position: chr11:27907952-27907795 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 81, 0

Conread position: 19-184
Cow position: chr11:36136290-36136128 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 132

Conread position: 19-184
Cow position: chr11:37565051-37564892 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 19-184
Cow position: chr11:45742552-45742392 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 8, 0

Conread position: 19-184
Cow position: chr11:47784962-47784793 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 65, 0

Conread position: 19-184
Cow position: chr11:53817037-53816871 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 19-184
Cow position: chr11:56115119-56114959 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 36, 67

Conread position: 19-184
Cow position: chr11:63498949-63499111 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 19-184
Cow position: chr11:79548751-79548919 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 32, 81

Conread position: 19-184
Cow position: chr11:81175780-81175615 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 142, 88

Conread position: 19-185
Cow position: chr11:12555122-12555288 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 0, 0

Conread position: 19-185
Cow position: chr11:15591298-15591457 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 19-185
Cow position: chr11:32108506-32108671 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 19-185
Cow position: chr11:42067046-42066882 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 86, 0

Conread position: 19-185
Cow position: chr11:53651822-53651658 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 117
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 19-185
Cow position: chr11:63475489-63475655 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 125
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 19-185
Cow position: chr11:66099675-66099845 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 120
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 70, 0

Conread position: 19-185
Cow position: chr11:77241884-77241722 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 121
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 92, 0

Conread position: 19-185
Cow position: chr11:85571624-85571788 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 145, 33

Conread position: 19-186
Cow position: chr11:40792511-40792688 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 131
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 86, 0

Conread position: 19-192
Cow position: chr11:30986818-30986649 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 129
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 93, 0

Conread position: 19-198
Cow position: chr11:17552897-17553077 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 130
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 89, 110

Conread position: 19-199
Cow position: chr11:34778261-34778440 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 129
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 6, 0

Conread position: 19-201
Cow position: chr11:24438037-24438217 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 175, 109

Conread position: 19-202
Cow position: chr11:18924929-18924746 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 133
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 175, 160

Conread position: 19-202
Cow position: chr11:42206598-42206422 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 27, 0

Conread position: 19-203
Cow position: chr11:10876461-10876278 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 131
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 175, 22

Conread position: 19-203
Cow position: chr11:30322312-30322493 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 51, 0

Conread position: 19-203
Cow position: chr11:60296920-60296730 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 167

Conread position: 19-203
Cow position: chr11:80370296-80370114 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 141, 0

Conread position: 19-203
Cow position: chr11:86895554-86895376 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 175, 81

Conread position: 19-204
Cow position: chr11:36092737-36092918 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 135
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 154, 54

Conread position: 19-211
Cow position: chr11:10066531-10066340 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 134
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 175, 34

Conread position: 19-215
Cow position: chr11:49396344-49396538 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 64, 0

Conread position: 19-218
Cow position: chr11:38334703-38334508 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 175, 55

Conread position: 19-219
Cow position: chr11:48315217-48315413 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 19-221
Cow position: chr11:42016457-42016657 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 19, 0

Conread position: 19-223
Cow position: chr11:74316888-74316689 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 142
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 19-226
Cow position: chr11:63165469-63165670 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 60, 0

Conread position: 19-227
Cow position: chr11:56288727-56288521 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 88, 0

Conread position: 19-228
Cow position: chr11:17676193-17676398 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 144
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 19-228
Cow position: chr11:62812770-62812976 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 205, 93

Conread position: 19-231
Cow position: chr11:68883902-68883690 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 141
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-232
Cow position: chr11:30708687-30708477 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 162
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 109, 132

Conread position: 19-232
Cow position: chr11:55053045-55052842 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 34, 0

Conread position: 19-233
Cow position: chr11:9237666-9237877 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 175, 36

Conread position: 19-233
Cow position: chr11:15382313-15382533 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 19-233
Cow position: chr11:27404889-27405100 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 152
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 74, 132

Conread position: 19-233
Cow position: chr11:29659742-29659529 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 11, 32

Conread position: 19-233
Cow position: chr11:32254034-32254247 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 95, 85

Conread position: 19-233
Cow position: chr11:35351851-35352069 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 157
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 80, 173

Conread position: 19-233
Cow position: chr11:48296207-48296003 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 151
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 44, 0

Conread position: 19-233
Cow position: chr11:52380690-52380902 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 83, 0

Conread position: 19-233
Cow position: chr11:55334101-55333879 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 156
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 19-233
Cow position: chr11:58594204-58594418 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-233
Cow position: chr11:67614743-67614953 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 159
Alignm E-value: 6e-35
Alignm gaps (pig, cow): 210, 83

Conread position: 19-233
Cow position: chr11:68913325-68913110 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 156
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 94, 168

Conread position: 19-233
Cow position: chr11:78380887-78381091 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 19-234
Cow position: chr11:6233696-6233911 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 175, 168

Conread position: 19-234
Cow position: chr11:15772531-15772743 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 157
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 84, 0

Conread position: 19-234
Cow position: chr11:36521062-36520843 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 159
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 144, 88

Conread position: 19-234
Cow position: chr11:41985866-41986077 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 92, 0

Conread position: 19-234
Cow position: chr11:53778802-53778585 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 87, 0

Conread position: 19-234
Cow position: chr11:65826572-65826782 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 175, 27

Conread position: 19-234
Cow position: chr11:69978147-69977939 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 26, 0

Conread position: 19-234
Cow position: chr11:71022182-71021969 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 145
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 41, 57

Conread position: 19-237
Cow position: chr11:41215915-41215698 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 152
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 45, 0

Conread position: 19-242
Cow position: chr11:21886012-21885791 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 161
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 205, 27

Conread position: 19-244
Cow position: chr11:18447319-18447533 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 158
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 19-244
Cow position: chr11:31866761-31866541 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 43, 69

Conread position: 19-245
Cow position: chr11:2917411-2917630 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 222, 66

Conread position: 19-246
Cow position: chr11:27747100-27746879 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 160
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 222, 66

Conread position: 19-249
Cow position: chr11:3715421-3715191 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 84, 27

Conread position: 19-249
Cow position: chr11:53773865-53773634 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 175, 160

Conread position: 19-250
Cow position: chr11:1932306-1932537 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 164
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 67, 87

Conread position: 19-250
Cow position: chr11:83043185-83043410 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 159
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 19-251
Cow position: chr11:258991-259222 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 22, 91

Conread position: 19-251
Cow position: chr11:7560183-7559949 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 162, 175

Conread position: 19-251
Cow position: chr11:20205676-20205902 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 222, 80

Conread position: 19-251
Cow position: chr11:23271824-23272051 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 175, 50

Conread position: 19-251
Cow position: chr11:32126798-32126559 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 73, 163

Conread position: 19-251
Cow position: chr11:33409084-33409314 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 159
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 209, 27

Conread position: 19-251
Cow position: chr11:48086100-48085872 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 160
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 152, 70

Conread position: 19-251
Cow position: chr11:49872705-49872931 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 168
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 93, 71

Conread position: 19-251
Cow position: chr11:50152631-50152860 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 165
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 94, 0

Conread position: 19-251
Cow position: chr11:63866479-63866708 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 162
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 117, 66

Conread position: 19-251
Cow position: chr11:63998908-63999134 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 164
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 192, 0

Conread position: 19-251
Cow position: chr11:65157223-65157455 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 76, 182

Conread position: 19-251
Cow position: chr11:80923144-80923373 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 162
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 91, 27

Conread position: 19-251
Cow position: chr11:83032859-83032630 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 156
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 222, 71

Conread position: 19-258
Cow position: chr11:22676294-22676061 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 175, 129

Conread position: 19-265
Cow position: chr11:1625040-1625284 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 164
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 94, 113

Conread position: 19-265
Cow position: chr11:29960474-29960238 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 167
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 28, 0

Conread position: 19-265
Cow position: chr11:44223063-44222828 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 173
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 236, 26

Conread position: 19-266
Cow position: chr11:47310802-47311046 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 167, 0

Conread position: 19-269
Cow position: chr11:27913468-27913220 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 165
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 76

Conread position: 19-271
Cow position: chr11:46922705-46922953 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 176
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 107, 71

Conread position: 19-271
Cow position: chr11:65762403-65762659 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 169
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 69, 13

Conread position: 19-276
Cow position: chr11:44032188-44031941 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 181
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 30, 0

Conread position: 19-283
Cow position: chr11:34646777-34646504 (view UCSC Genome Browser custom track)
Alignm length: 274
Alignm identity: 181
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 87, 0

Conread position: 19-284
Cow position: chr11:40395619-40395353 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 187
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 9, 71

Conread position: 19-295
Cow position: chr11:19591814-19592085 (view UCSC Genome Browser custom track)
Alignm length: 280
Alignm identity: 195
Alignm E-value: 6e-34
Alignm gaps (pig, cow): 175, 27

Conread position: 20-145
Cow position: chr11:43594247-43594371 (view UCSC Genome Browser custom track)
Alignm length: 126
Alignm identity: 97
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 87, 0

Conread position: 20-171
Cow position: chr11:42837197-42837047 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 20-172
Cow position: chr11:9691190-9691035 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 66, 33

Conread position: 20-173
Cow position: chr11:12742313-12742461 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 29, 0

Conread position: 20-177
Cow position: chr11:5328966-5328811 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 124, 0

Conread position: 20-184
Cow position: chr11:68841390-68841226 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 20-203
Cow position: chr11:57767370-57767190 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 174, 70

Conread position: 20-233
Cow position: chr11:39060424-39060632 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 146
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 82, 0

Conread position: 20-234
Cow position: chr11:29786312-29786530 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 81, 0

Conread position: 20-251
Cow position: chr11:62239922-62239699 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 157
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 20-255
Cow position: chr11:21508192-21507947 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 165
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 69, 0

Conread position: 20-280
Cow position: chr11:46329679-46329415 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 181
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 161, 27

Conread position: 21-155
Cow position: chr11:65939682-65939815 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 32, 0

Conread position: 21-158
Cow position: chr11:6258905-6259042 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 103
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-167
Cow position: chr11:28078669-28078529 (view UCSC Genome Browser custom track)
Alignm length: 147
Alignm identity: 110
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 76, 0

Conread position: 21-172
Cow position: chr11:30688355-30688506 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 108
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-175
Cow position: chr11:41213232-41213076 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 117
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 87, 0

Conread position: 21-176
Cow position: chr11:42065832-42065676 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 113
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 81, 0

Conread position: 21-178
Cow position: chr11:35924242-35924085 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 136, 53

Conread position: 21-178
Cow position: chr11:62102266-62102423 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 118
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 21-182
Cow position: chr11:63849770-63849931 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 120
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 21-183
Cow position: chr11:32800807-32800645 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 21-183
Cow position: chr11:50629450-50629296 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 123
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 17, 0

Conread position: 21-184
Cow position: chr11:6094224-6094384 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 119
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 90, 0

Conread position: 21-184
Cow position: chr11:78672853-78672689 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 12, 71

Conread position: 21-185
Cow position: chr11:19147962-19148119 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 73, 0

Conread position: 21-185
Cow position: chr11:35732903-35733066 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 76, 0

Conread position: 21-185
Cow position: chr11:69168768-69168604 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-185
Cow position: chr11:81143364-81143524 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 139, 68

Conread position: 21-185
Cow position: chr11:81673608-81673443 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 117
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 21-186
Cow position: chr11:19549656-19549497 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 31, 0

Conread position: 21-186
Cow position: chr11:26057467-26057634 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 86, 0

Conread position: 21-186
Cow position: chr11:33369332-33369167 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 134
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 21-186
Cow position: chr11:34747688-34747523 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 116
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-186
Cow position: chr11:64781268-64781103 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-186
Cow position: chr11:69417583-69417418 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 123
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 21-189
Cow position: chr11:76896193-76896361 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 21-196
Cow position: chr11:20238856-20238683 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 131
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 90, 0

Conread position: 21-202
Cow position: chr11:3896518-3896700 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 95, 0

Conread position: 21-202
Cow position: chr11:68660434-68660612 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 17, 0

Conread position: 21-203
Cow position: chr11:5417066-5416884 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 125
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-203
Cow position: chr11:9836275-9836457 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 173, 166

Conread position: 21-203
Cow position: chr11:17517579-17517398 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 135
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 81, 25

Conread position: 21-204
Cow position: chr11:23220540-23220361 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 172, 53

Conread position: 21-208
Cow position: chr11:36058978-36058791 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 129
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 21-209
Cow position: chr11:23297842-23297654 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 93, 124

Conread position: 21-210
Cow position: chr11:23518437-23518627 (view UCSC Genome Browser custom track)
Alignm length: 191
Alignm identity: 129
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 88, 0

Conread position: 21-214
Cow position: chr11:41123417-41123612 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 133
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 146, 0

Conread position: 21-215
Cow position: chr11:35182807-35183001 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 132
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-217
Cow position: chr11:25968673-25968867 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 144
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 145, 0

Conread position: 21-217
Cow position: chr11:48672894-48672698 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 135
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-219
Cow position: chr11:87171896-87172093 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 151
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 173, 64

Conread position: 21-224
Cow position: chr11:51846477-51846275 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 173, 68

Conread position: 21-229
Cow position: chr11:43914473-43914264 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 152
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 203, 0

Conread position: 21-233
Cow position: chr11:4732524-4732312 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 139
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-233
Cow position: chr11:8670197-8669980 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 152
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 107, 0

Conread position: 21-233
Cow position: chr11:15504289-15504083 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 115, 0

Conread position: 21-233
Cow position: chr11:19118802-19119013 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 140
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 150, 0

Conread position: 21-233
Cow position: chr11:19247025-19247229 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 35, 0

Conread position: 21-233
Cow position: chr11:34616441-34616228 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 143
Alignm E-value: 6e-24
Alignm gaps (pig, cow): 160, 0

Conread position: 21-233
Cow position: chr11:34968433-34968644 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 139, 0

Conread position: 21-233
Cow position: chr11:36940414-36940626 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 21-233
Cow position: chr11:37804372-37804584 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 21-233
Cow position: chr11:80893962-80893752 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 141
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 176, 0

Conread position: 21-234
Cow position: chr11:29308762-29308549 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 21-234
Cow position: chr11:39462799-39462592 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 74, 0

Conread position: 21-234
Cow position: chr11:40459285-40459076 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 107, 24

Conread position: 21-234
Cow position: chr11:52690345-52690551 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 39, 0

Conread position: 21-234
Cow position: chr11:62889712-62889925 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 158
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 0, 0

Conread position: 21-238
Cow position: chr11:45350330-45350547 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 154
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 199, 213

Conread position: 21-246
Cow position: chr11:3720435-3720210 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 150
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 215, 165

Conread position: 21-246
Cow position: chr11:35444225-35443999 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 149
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 213, 94

Conread position: 21-246
Cow position: chr11:71854102-71854324 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 13, 73

Conread position: 21-247
Cow position: chr11:62811476-62811251 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 161
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 173, 72

Conread position: 21-249
Cow position: chr11:26143919-26144143 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 164
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 214, 20

Conread position: 21-249
Cow position: chr11:66325927-66326158 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 158
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 88, 201

Conread position: 21-249
Cow position: chr11:84228543-84228763 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 173, 64

Conread position: 21-250
Cow position: chr11:62578983-62578753 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 152
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 212, 49

Conread position: 21-251
Cow position: chr11:16315054-16314826 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 164
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 213, 0

Conread position: 21-251
Cow position: chr11:30867357-30867137 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 156
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 73, 0

Conread position: 21-251
Cow position: chr11:35562900-35562669 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 214, 7

Conread position: 21-251
Cow position: chr11:59024173-59024410 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 63, 150

Conread position: 21-251
Cow position: chr11:66041452-66041229 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 167
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 174, 61

Conread position: 21-262
Cow position: chr11:31024621-31024867 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 167
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 81, 204

Conread position: 21-263
Cow position: chr11:70382509-70382751 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 175, 199

Conread position: 21-264
Cow position: chr11:36914385-36914625 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 167
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 193, 198

Conread position: 21-267
Cow position: chr11:20684390-20684633 (view UCSC Genome Browser custom track)
Alignm length: 247
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 213, 0

Conread position: 21-268
Cow position: chr11:2788575-2788326 (view UCSC Genome Browser custom track)
Alignm length: 251
Alignm identity: 168
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 212, 229

Conread position: 21-268
Cow position: chr11:75090039-75090279 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 166
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 31, 0

Conread position: 21-273
Cow position: chr11:41438005-41438257 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 170
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 212, 238

Conread position: 22-168
Cow position: chr11:8828189-8828040 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 110
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 92, 0

Conread position: 22-169
Cow position: chr11:70821223-70821078 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 22-177
Cow position: chr11:6581013-6580858 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 22-177
Cow position: chr11:73940383-73940538 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 112
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 22-179
Cow position: chr11:43641567-43641410 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 121
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 22-184
Cow position: chr11:35724149-35723987 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-185
Cow position: chr11:32782695-32782866 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 22-185
Cow position: chr11:46999165-46998996 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 122
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 84, 0

Conread position: 22-201
Cow position: chr11:2484617-2484793 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 133
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 91, 25

Conread position: 22-201
Cow position: chr11:49149225-49149050 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 131
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 152, 76

Conread position: 22-203
Cow position: chr11:63485111-63484937 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 66, 0

Conread position: 22-203
Cow position: chr11:68326683-68326864 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 132
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 172, 157

Conread position: 22-232
Cow position: chr11:5075051-5075257 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 140
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 0

Conread position: 22-233
Cow position: chr11:17721622-17721832 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 80, 0

Conread position: 22-233
Cow position: chr11:25791514-25791724 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 151
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 172, 164

Conread position: 22-233
Cow position: chr11:30808418-30808624 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 145
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 22-233
Cow position: chr11:70206494-70206290 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 144
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 0

Conread position: 22-234
Cow position: chr11:5294384-5294170 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 49, 167

Conread position: 22-234
Cow position: chr11:80412830-80413046 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 146
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 78, 0

Conread position: 22-241
Cow position: chr11:8437511-8437733 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 159
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 77, 22

Conread position: 22-246
Cow position: chr11:55744648-55744422 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 202, 0

Conread position: 22-249
Cow position: chr11:30638773-30638998 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 162
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 214, 70

Conread position: 22-250
Cow position: chr11:30209644-30209875 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 163
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 184, 30

Conread position: 22-250
Cow position: chr11:48544615-48544382 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 163
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 165, 68

Conread position: 22-251
Cow position: chr11:25620211-25620445 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 166
Alignm E-value: 4e-31
Alignm gaps (pig, cow): 159, 70

Conread position: 22-264
Cow position: chr11:21421759-21421993 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 163
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 172, 130

Conread position: 22-265
Cow position: chr11:42159883-42160115 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 172
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 30, 0

Conread position: 23-172
Cow position: chr11:64096489-64096635 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 23, 0

Conread position: 23-186
Cow position: chr11:49486967-49486795 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 126
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 62, 0

Conread position: 23-202
Cow position: chr11:7571798-7571625 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 85, 0

Conread position: 23-228
Cow position: chr11:8496211-8496006 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 196, 115

Conread position: 23-233
Cow position: chr11:3715000-3714795 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 159
Alignm E-value: 7e-36
Alignm gaps (pig, cow): 171, 163

Conread position: 23-233
Cow position: chr11:78544463-78544253 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 140
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 23-234
Cow position: chr11:13500188-13499986 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 150
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 22, 0

Conread position: 23-234
Cow position: chr11:84385462-84385668 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 157
Alignm E-value: 2e-35
Alignm gaps (pig, cow): 23, 0

Conread position: 23-246
Cow position: chr11:57608288-57608505 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 155
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 166, 45

Conread position: 23-251
Cow position: chr11:27248666-27248445 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 159
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 219, 62

Conread position: 23-255
Cow position: chr11:35980963-35981202 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 155, 124

Conread position: 23-263
Cow position: chr11:75178076-75177836 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 160
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 80, 133

Conread position: 23-264
Cow position: chr11:80564475-80564234 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 169
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 73, 104

Conread position: 23-265
Cow position: chr11:36977985-36977748 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 160
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 164, 0

Conread position: 23-265
Cow position: chr11:68554914-68555153 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 160
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 64, 18

Conread position: 23-270
Cow position: chr11:32710693-32710451 (view UCSC Genome Browser custom track)
Alignm length: 249
Alignm identity: 164
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 89, 6

Conread position: 23-287
Cow position: chr11:76653199-76652931 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 175
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 186, 198

Conread position: 24-202
Cow position: chr11:81405990-81406168 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 136
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 148, 92

Conread position: 24-265
Cow position: chr11:17036355-17036587 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 165
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 66, 0

Conread position: 25-233
Cow position: chr11:70483675-70483882 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 142
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 169, 85

Conread position: 25-243
Cow position: chr11:40516939-40517156 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 143
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 153, 0

Conread position: 26-203
Cow position: chr11:60720279-60720456 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 133
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 26-233
Cow position: chr11:7874315-7874108 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 147
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 168, 153

Conread position: 26-234
Cow position: chr11:36920403-36920609 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 151
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 126, 27

Conread position: 27-185
Cow position: chr11:54872587-54872742 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 115, 63

Conread position: 27-200
Cow position: chr11:80296685-80296850 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 128
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 101, 19

Conread position: 27-234
Cow position: chr11:35109366-35109569 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 153
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 146, 19

Conread position: 29-185
Cow position: chr11:26343274-26343119 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 118
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 86, 0

Conread position: 29-203
Cow position: chr11:21173265-21173438 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 127
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 57, 0

Conread position: 29-225
Cow position: chr11:46884547-46884351 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 142
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 29-232
Cow position: chr11:29677379-29677173 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 157, 83

Conread position: 29-234
Cow position: chr11:13042976-13043177 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 143
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 68, 0

Conread position: 29-254
Cow position: chr11:8544845-8545072 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 156
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 162, 5

Conread position: 30-146
Cow position: chr11:67417980-67417865 (view UCSC Genome Browser custom track)
Alignm length: 117
Alignm identity: 92
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 67, 0

Conread position: 30-177
Cow position: chr11:30600019-30600166 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 111
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 71

Conread position: 30-184
Cow position: chr11:5467252-5467100 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 113
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 59, 0

Conread position: 30-185
Cow position: chr11:37435819-37435970 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 11, 0

Conread position: 30-203
Cow position: chr11:2836031-2835858 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 30-210
Cow position: chr11:45872139-45872318 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 126
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 80, 0

Conread position: 30-249
Cow position: chr11:77745078-77745300 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 153
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 101, 167

Conread position: 30-251
Cow position: chr11:4637004-4637218 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 155
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 74, 0

Conread position: 31-233
Cow position: chr11:85723864-85723667 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 163, 102

Conread position: 31-251
Cow position: chr11:47772212-47772436 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 156
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 50, 106

Conread position: 32-170
Cow position: chr11:34144750-34144892 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 32-186
Cow position: chr11:39854853-39855001 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 52, 0

Conread position: 32-234
Cow position: chr11:35926740-35926936 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 148
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 20, 0

Conread position: 32-258
Cow position: chr11:32199112-32198881 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 146, 101

Conread position: 32-265
Cow position: chr11:63435691-63435460 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 163
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 156, 0

Conread position: 33-169
Cow position: chr11:85985881-85986016 (view UCSC Genome Browser custom track)
Alignm length: 138
Alignm identity: 105
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 103, 69

Conread position: 33-234
Cow position: chr11:64409134-64408945 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 143
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 33-249
Cow position: chr11:35960813-35961029 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 145
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 189, 82

Conread position: 34-177
Cow position: chr11:20021998-20021845 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 117
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 34-228
Cow position: chr11:38670857-38670660 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 146
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 104, 160

Conread position: 37-183
Cow position: chr11:35922031-35922178 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 7, 137

Conread position: 38-185
Cow position: chr11:31875257-31875110 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 108
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 38-234
Cow position: chr11:18508866-18509062 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 140
Alignm E-value: 4e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 39-233
Cow position: chr11:32595622-32595427 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 131
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 0

Conread position: 39-233
Cow position: chr11:63202085-63202280 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 138
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 137, 146

Conread position: 39-239
Cow position: chr11:39499519-39499320 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 139
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 6, 75

Conread position: 39-260
Cow position: chr11:35791657-35791881 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 151
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 5, 79

Conread position: 41-184
Cow position: chr11:17807801-17807944 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 106
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 43-233
Cow position: chr11:8683920-8684111 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 136
Alignm E-value: 9e-28
Alignm gaps (pig, cow): 181, 0

Conread position: 46-177
Cow position: chr11:35140065-35139934 (view UCSC Genome Browser custom track)
Alignm length: 132
Alignm identity: 100
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 46-186
Cow position: chr11:30370257-30370121 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 66, 0

Conread position: 46-255
Cow position: chr11:87155676-87155466 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 143
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 191, 140

Conread position: 48-203
Cow position: chr11:34136394-34136240 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 119
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 0

Conread position: 49-233
Cow position: chr11:31410728-31410908 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 58, 0

Conread position: 52-282
Cow position: chr11:71868454-71868684 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 142, 28

Conread position: 65-233
Cow position: chr11:2344388-2344220 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 129
Alignm E-value: 7e-25
Alignm gaps (pig, cow): 48, 19

Conread position: 74-251
Cow position: chr11:76835496-76835675 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 130
Alignm E-value: 8e-27
Alignm gaps (pig, cow): 150, 0

Conread position: 373-564
Cow position: chr11:36415119-36414927 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 152
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 74, 59

Show alignments to all cow chromosomes.