Cow genome map

Conread name: Ss1.1-rnlu1823b_k24.5

Conread position: 1-203
Cow position: chr20:21345698-21345493 (view UCSC Genome Browser custom track)
Alignm length: 206
Alignm identity: 140
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 67, 0

Conread position: 1-233
Cow position: chr20:3564411-3564190 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 161
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 18, 0

Conread position: 2-167
Cow position: chr20:17524534-17524368 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 18, 0

Conread position: 5-177
Cow position: chr20:21344728-21344553 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 135
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 15, 0

Conread position: 6-160
Cow position: chr20:39694838-39694994 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 17, 152

Conread position: 6-251
Cow position: chr20:38515040-38514788 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 74, 11

Conread position: 7-184
Cow position: chr20:2798742-2798912 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 45, 0

Conread position: 7-203
Cow position: chr20:19201787-19201591 (view UCSC Genome Browser custom track)
Alignm length: 198
Alignm identity: 151
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 187, 179

Conread position: 7-203
Cow position: chr20:28249434-28249240 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 139
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 11, 0

Conread position: 8-166
Cow position: chr20:40442213-40442370 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 100, 10

Conread position: 8-169
Cow position: chr20:38846976-38847140 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 97, 11

Conread position: 8-177
Cow position: chr20:15432633-15432801 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 101, 0

Conread position: 8-178
Cow position: chr20:14490493-14490331 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 11, 0

Conread position: 8-182
Cow position: chr20:41313633-41313468 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 133
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 76

Conread position: 8-184
Cow position: chr20:38872746-38872922 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 102

Conread position: 8-185
Cow position: chr20:26387708-26387539 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 44, 0

Conread position: 8-185
Cow position: chr20:34221736-34221557 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 132
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 124

Conread position: 8-222
Cow position: chr20:24883108-24883326 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 155
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 96, 0

Conread position: 8-228
Cow position: chr20:21291921-21291695 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 177

Conread position: 8-232
Cow position: chr20:30755535-30755310 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 151
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 206, 214

Conread position: 8-233
Cow position: chr20:15530113-15529891 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 163
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 8, 39

Conread position: 8-233
Cow position: chr20:34083972-34083747 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 165
Alignm E-value: 6e-30
Alignm gaps (pig, cow): 105, 11

Conread position: 8-234
Cow position: chr20:4944998-4945222 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 166
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 91, 168

Conread position: 8-243
Cow position: chr20:4891866-4892098 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 94, 0

Conread position: 8-245
Cow position: chr20:20892424-20892665 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 162
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 154, 19

Conread position: 8-249
Cow position: chr20:8556019-8556258 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 163
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 216, 11

Conread position: 8-250
Cow position: chr20:381879-382120 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 170
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 13, 36

Conread position: 8-251
Cow position: chr20:2298547-2298778 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 171
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 226, 10

Conread position: 8-251
Cow position: chr20:33623306-33623543 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 15, 85

Conread position: 8-261
Cow position: chr20:19237323-19237078 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 171
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 186, 81

Conread position: 8-265
Cow position: chr20:23846412-23846663 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 173
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 15, 105

Conread position: 8-265
Cow position: chr20:28982953-28982702 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 175
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 21, 79

Conread position: 8-271
Cow position: chr20:4998855-4999124 (view UCSC Genome Browser custom track)
Alignm length: 271
Alignm identity: 182
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 14, 215

Conread position: 8-280
Cow position: chr20:398060-398326 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 180
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 227, 77

Conread position: 9-141
Cow position: chr20:2828027-2827898 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 105
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 116, 81

Conread position: 9-184
Cow position: chr20:6370544-6370373 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 128
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 96, 10

Conread position: 10-176
Cow position: chr20:17606714-17606880 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 10-233
Cow position: chr20:5950390-5950613 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 165
Alignm E-value: 5e-39
Alignm gaps (pig, cow): 184, 176

Conread position: 10-233
Cow position: chr20:35742021-35741798 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 10-234
Cow position: chr20:29845304-29845080 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 94, 9

Conread position: 10-243
Cow position: chr20:14897990-14897759 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 155
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 184, 177

Conread position: 10-246
Cow position: chr20:11751904-11751669 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 231, 97

Conread position: 10-251
Cow position: chr20:14433170-14433412 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 170
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 193, 105

Conread position: 10-263
Cow position: chr20:20352660-20352915 (view UCSC Genome Browser custom track)
Alignm length: 257
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 200, 105

Conread position: 13-184
Cow position: chr20:8409212-8409378 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 127
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 103, 0

Conread position: 15-177
Cow position: chr20:5009977-5009818 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 118
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 99, 94

Conread position: 17-234
Cow position: chr20:5703715-5703500 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 158
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 142, 29

Conread position: 18-252
Cow position: chr20:35176532-35176769 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 159
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 215, 0

Conread position: 19-119
Cow position: chr20:18400178-18400078 (view UCSC Genome Browser custom track)
Alignm length: 101
Alignm identity: 82
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-163
Cow position: chr20:29755019-29754876 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 112
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 105, 0

Conread position: 19-166
Cow position: chr20:5268599-5268746 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-166
Cow position: chr20:23062393-23062247 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 107
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 35, 0

Conread position: 19-167
Cow position: chr20:26424649-26424502 (view UCSC Genome Browser custom track)
Alignm length: 149
Alignm identity: 113
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 82, 0

Conread position: 19-169
Cow position: chr20:6473976-6473827 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 120
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 101, 0

Conread position: 19-169
Cow position: chr20:17737352-17737203 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 108
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 100, 0

Conread position: 19-172
Cow position: chr20:18500771-18500618 (view UCSC Genome Browser custom track)
Alignm length: 154
Alignm identity: 120
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 19-172
Cow position: chr20:23506177-23506026 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 117
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 89, 8

Conread position: 19-174
Cow position: chr20:35888518-35888673 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 111
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 19-175
Cow position: chr20:14755602-14755752 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 66, 0

Conread position: 19-176
Cow position: chr20:12652686-12652843 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 116
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 19-176
Cow position: chr20:13829501-13829347 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 122
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 78, 27

Conread position: 19-177
Cow position: chr20:600540-600392 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 122
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 69

Conread position: 19-177
Cow position: chr20:3035580-3035419 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 115
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 94, 0

Conread position: 19-177
Cow position: chr20:11002645-11002487 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-177
Cow position: chr20:18622816-18622660 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 113
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 33, 0

Conread position: 19-177
Cow position: chr20:23548998-23548840 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 114
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-177
Cow position: chr20:33462470-33462312 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 19-177
Cow position: chr20:34271571-34271413 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 19-178
Cow position: chr20:34348971-34349130 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-179
Cow position: chr20:23358253-23358410 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 90, 0

Conread position: 19-179
Cow position: chr20:37609864-37609706 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 120
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 140, 0

Conread position: 19-184
Cow position: chr20:20202461-20202298 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 0

Conread position: 19-184
Cow position: chr20:35310571-35310404 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 124
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 19-184
Cow position: chr20:35589442-35589605 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 95, 0

Conread position: 19-185
Cow position: chr20:16941041-16941210 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 130
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 73, 66

Conread position: 19-185
Cow position: chr20:16977596-16977766 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 126
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 71, 0

Conread position: 19-185
Cow position: chr20:17840983-17840823 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 140, 19

Conread position: 19-185
Cow position: chr20:19919577-19919738 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 148, 81

Conread position: 19-185
Cow position: chr20:27407654-27407808 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 30, 0

Conread position: 19-185
Cow position: chr20:33434918-33435077 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 126
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 51, 0

Conread position: 19-188
Cow position: chr20:8442214-8442380 (view UCSC Genome Browser custom track)
Alignm length: 171
Alignm identity: 131
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 52, 27

Conread position: 19-203
Cow position: chr20:2316186-2316365 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 132
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 49, 67

Conread position: 19-203
Cow position: chr20:7132867-7132686 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 19-203
Cow position: chr20:11548487-11548662 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 137
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 70, 0

Conread position: 19-218
Cow position: chr20:19834590-19834785 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 136
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 19-218
Cow position: chr20:35442041-35442237 (view UCSC Genome Browser custom track)
Alignm length: 201
Alignm identity: 141
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 175, 6

Conread position: 19-224
Cow position: chr20:32847584-32847384 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 140
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 13, 67

Conread position: 19-228
Cow position: chr20:34202883-34202670 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 156
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 47, 171

Conread position: 19-231
Cow position: chr20:8679419-8679635 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 165, 0

Conread position: 19-232
Cow position: chr20:26996775-26996561 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 149
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 80, 128

Conread position: 19-233
Cow position: chr20:1139525-1139737 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 175, 11

Conread position: 19-233
Cow position: chr20:20124790-20125002 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 150
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 140, 0

Conread position: 19-233
Cow position: chr20:38925608-38925821 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 143
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 175, 123

Conread position: 19-234
Cow position: chr20:7416919-7417138 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 146
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 87, 0

Conread position: 19-234
Cow position: chr20:11135511-11135732 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 138, 66

Conread position: 19-234
Cow position: chr20:12126060-12126275 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 19-234
Cow position: chr20:14620065-14620274 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 148
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 137, 74

Conread position: 19-234
Cow position: chr20:14980266-14980480 (view UCSC Genome Browser custom track)
Alignm length: 221
Alignm identity: 153
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 152, 71

Conread position: 19-234
Cow position: chr20:21428399-21428190 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 147
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 195, 65

Conread position: 19-234
Cow position: chr20:23590510-23590718 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 9, 0

Conread position: 19-237
Cow position: chr20:28594533-28594312 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 154
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 86, 13

Conread position: 19-243
Cow position: chr20:21721461-21721230 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 73, 37

Conread position: 19-246
Cow position: chr20:39398723-39398495 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 155
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 216, 71

Conread position: 19-249
Cow position: chr20:13876468-13876703 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 164
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 155, 31

Conread position: 19-251
Cow position: chr20:7737993-7738219 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 0

Conread position: 19-254
Cow position: chr20:3255275-3255044 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 162
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 117, 64

Conread position: 19-255
Cow position: chr20:18379618-18379384 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 222, 71

Conread position: 19-258
Cow position: chr20:20158372-20158138 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 171
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 186, 73

Conread position: 19-265
Cow position: chr20:34251428-34251675 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 161
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 175, 0

Conread position: 19-270
Cow position: chr20:32583562-32583313 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 167
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 97, 161

Conread position: 19-280
Cow position: chr20:24070043-24069784 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 180
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 219, 26

Conread position: 20-172
Cow position: chr20:11045914-11045766 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 111
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 84, 0

Conread position: 20-200
Cow position: chr20:38664333-38664155 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 127
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 176, 96

Conread position: 20-203
Cow position: chr20:7438617-7438791 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 130
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 20-203
Cow position: chr20:28935402-28935579 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 140
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 174, 129

Conread position: 20-232
Cow position: chr20:8578495-8578280 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 151
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 23, 91

Conread position: 20-232
Cow position: chr20:25953507-25953295 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 155
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 143, 99

Conread position: 20-268
Cow position: chr20:25009393-25009642 (view UCSC Genome Browser custom track)
Alignm length: 254
Alignm identity: 174
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 215, 87

Conread position: 21-163
Cow position: chr20:14460623-14460481 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 105
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-167
Cow position: chr20:30027879-30028022 (view UCSC Genome Browser custom track)
Alignm length: 148
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 92, 32

Conread position: 21-179
Cow position: chr20:297765-297924 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 119
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 0

Conread position: 21-181
Cow position: chr20:13023263-13023420 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 122
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 90, 0

Conread position: 21-183
Cow position: chr20:17370006-17370171 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 127
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 105

Conread position: 21-184
Cow position: chr20:27323508-27323345 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 129
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 0, 0

Conread position: 21-185
Cow position: chr20:11920494-11920652 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 121
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 32, 0

Conread position: 21-185
Cow position: chr20:30639539-30639705 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 120
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 87, 0

Conread position: 21-186
Cow position: chr20:5365167-5365003 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 126
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 20, 0

Conread position: 21-186
Cow position: chr20:17544866-17544701 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 21-186
Cow position: chr20:27315215-27315055 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 21-186
Cow position: chr20:37358098-37357933 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 128
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 21-202
Cow position: chr20:17251958-17251778 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 137
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 73, 0

Conread position: 21-202
Cow position: chr20:24712079-24711901 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 139
Alignm E-value: 8e-33
Alignm gaps (pig, cow): 170, 32

Conread position: 21-202
Cow position: chr20:36097762-36097582 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 131
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 171, 0

Conread position: 21-203
Cow position: chr20:25464807-25464985 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 127
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 21-209
Cow position: chr20:24960179-24959988 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 131
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 166, 0

Conread position: 21-210
Cow position: chr20:9033977-9034163 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 134
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 120, 0

Conread position: 21-216
Cow position: chr20:1824392-1824579 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 64, 0

Conread position: 21-219
Cow position: chr20:35444867-35445059 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 25, 0

Conread position: 21-229
Cow position: chr20:6054268-6054476 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 154
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 203, 44

Conread position: 21-232
Cow position: chr20:34097709-34097925 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 161
Alignm E-value: 4e-37
Alignm gaps (pig, cow): 79, 0

Conread position: 21-233
Cow position: chr20:14283162-14282950 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 158
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 0, 0

Conread position: 21-233
Cow position: chr20:25021670-25021458 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 149
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 99, 140

Conread position: 21-234
Cow position: chr20:10200589-10200375 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 156
Alignm E-value: 9e-34
Alignm gaps (pig, cow): 7, 159

Conread position: 21-234
Cow position: chr20:11008412-11008199 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 0, 0

Conread position: 21-234
Cow position: chr20:39325631-39325420 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 147
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 176, 34

Conread position: 21-249
Cow position: chr20:19328637-19328403 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 161
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 65, 219

Conread position: 21-249
Cow position: chr20:36239489-36239259 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 156
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 166, 176

Conread position: 21-250
Cow position: chr20:5814804-5814578 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 162
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 212, 17

Conread position: 21-263
Cow position: chr20:16818657-16818418 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 216, 25

Conread position: 21-265
Cow position: chr20:6248360-6248600 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 35, 0

Conread position: 21-272
Cow position: chr20:36211906-36212160 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 172
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 143

Conread position: 21-280
Cow position: chr20:39417664-39417915 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 183
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 26, 15

Conread position: 22-163
Cow position: chr20:32067251-32067393 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 108
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 107, 0

Conread position: 22-177
Cow position: chr20:5103985-5104140 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 115
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 0, 0

Conread position: 22-177
Cow position: chr20:39229696-39229851 (view UCSC Genome Browser custom track)
Alignm length: 156
Alignm identity: 114
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 22-184
Cow position: chr20:34848141-34847985 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 121
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 73, 0

Conread position: 22-203
Cow position: chr20:26040859-26041038 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 89, 0

Conread position: 22-233
Cow position: chr20:14807121-14806917 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 154
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 71, 0

Conread position: 22-234
Cow position: chr20:28605444-28605239 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 68, 0

Conread position: 22-249
Cow position: chr20:3148919-3148700 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 161
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 44, 0

Conread position: 22-280
Cow position: chr20:11611919-11611664 (view UCSC Genome Browser custom track)
Alignm length: 260
Alignm identity: 175
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 248, 93

Conread position: 22-280
Cow position: chr20:12581718-12581976 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 182
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 213, 68

Conread position: 23-172
Cow position: chr20:13995047-13994905 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 109, 29

Conread position: 23-172
Cow position: chr20:17733319-17733468 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 111
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 23-210
Cow position: chr20:33359232-33359420 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 77, 46

Conread position: 24-233
Cow position: chr20:25161895-25162096 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 145
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 190, 43

Conread position: 24-245
Cow position: chr20:40177480-40177261 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 152
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 184, 88

Conread position: 24-254
Cow position: chr20:20898353-20898583 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 155
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 212, 65

Conread position: 26-185
Cow position: chr20:23850855-23850698 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 118
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 94, 39

Conread position: 27-167
Cow position: chr20:20926393-20926533 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 103
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 27-185
Cow position: chr20:20459825-20459670 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 106, 0

Conread position: 27-233
Cow position: chr20:12420386-12420588 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 143
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 77, 0

Conread position: 27-233
Cow position: chr20:39268849-39269055 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 139
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 28, 83

Conread position: 27-234
Cow position: chr20:14880019-14879818 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 142
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 63, 0

Conread position: 29-167
Cow position: chr20:22937085-22937223 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 101
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 29-191
Cow position: chr20:29768743-29768575 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 124
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 67, 87

Conread position: 29-203
Cow position: chr20:16291922-16291748 (view UCSC Genome Browser custom track)
Alignm length: 175
Alignm identity: 131
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 29-251
Cow position: chr20:2819779-2819554 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 84, 0

Conread position: 29-251
Cow position: chr20:7425967-7426189 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 158
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 206, 60

Conread position: 29-251
Cow position: chr20:8547291-8547076 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 158
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 121, 24

Conread position: 30-177
Cow position: chr20:10469275-10469125 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 110
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 134, 0

Conread position: 30-233
Cow position: chr20:40818703-40818908 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 141
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 176, 156

Conread position: 31-284
Cow position: chr20:5702951-5702701 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 182
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 40, 59

Conread position: 32-183
Cow position: chr20:6849123-6848975 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 112
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 32-234
Cow position: chr20:20967547-20967350 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 146
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 28, 53

Conread position: 33-183
Cow position: chr20:14607686-14607831 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 57, 0

Conread position: 33-189
Cow position: chr20:354671-354827 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 124
Alignm E-value: 3e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 33-232
Cow position: chr20:33067132-33067329 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 135
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 69, 0

Conread position: 34-185
Cow position: chr20:20590078-20590223 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 65, 0

Conread position: 39-233
Cow position: chr20:24398421-24398616 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 132
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 5, 0

Conread position: 39-247
Cow position: chr20:29990223-29990432 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 5, 133

Conread position: 40-234
Cow position: chr20:22959125-22959317 (view UCSC Genome Browser custom track)
Alignm length: 195
Alignm identity: 139
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 114, 0

Conread position: 43-250
Cow position: chr20:18831663-18831866 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 146
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 180, 38

Conread position: 47-185
Cow position: chr20:25474769-25474631 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 104
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 53, 83

Conread position: 49-203
Cow position: chr20:31746425-31746576 (view UCSC Genome Browser custom track)
Alignm length: 155
Alignm identity: 116
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 58, 0

Conread position: 58-250
Cow position: chr20:32463323-32463507 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 135
Alignm E-value: 7e-21
Alignm gaps (pig, cow): 46, 0

Conread position: 86-251
Cow position: chr20:9412664-9412498 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 122
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 151, 7

Show alignments to all cow chromosomes.