Cow genome map

Conread name: Ss1.1-rnlu1823b_k24.5

Conread position: 1-172
Cow position: chr25:7185058-7185230 (view UCSC Genome Browser custom track)
Alignm length: 173
Alignm identity: 128
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 0

Conread position: 1-233
Cow position: chr25:9002882-9002657 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 104, 15

Conread position: 1-233
Cow position: chr25:17919191-17918959 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 166
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 113, 64

Conread position: 2-185
Cow position: chr25:18934422-18934602 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 22, 106

Conread position: 3-184
Cow position: chr25:22154243-22154058 (view UCSC Genome Browser custom track)
Alignm length: 186
Alignm identity: 138
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 110, 0

Conread position: 5-166
Cow position: chr25:22119444-22119605 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 125
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 27, 49

Conread position: 5-184
Cow position: chr25:21547367-21547191 (view UCSC Genome Browser custom track)
Alignm length: 180
Alignm identity: 132
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 84, 0

Conread position: 6-202
Cow position: chr25:22565755-22565942 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 146
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 14, 42

Conread position: 7-184
Cow position: chr25:1763293-1763121 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 15, 79

Conread position: 7-233
Cow position: chr25:40682943-40682723 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 157
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 122, 11

Conread position: 7-246
Cow position: chr25:12305487-12305248 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 165
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 0, 0

Conread position: 8-126
Cow position: chr25:11096028-11096146 (view UCSC Genome Browser custom track)
Alignm length: 119
Alignm identity: 92
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 8-166
Cow position: chr25:6190139-6190291 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 115
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 77, 0

Conread position: 8-167
Cow position: chr25:28939933-28940090 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 118
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 94, 0

Conread position: 8-177
Cow position: chr25:28662314-28662151 (view UCSC Genome Browser custom track)
Alignm length: 170
Alignm identity: 121
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 92, 0

Conread position: 8-179
Cow position: chr25:10332810-10332639 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 118
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 8-185
Cow position: chr25:1823884-1824064 (view UCSC Genome Browser custom track)
Alignm length: 181
Alignm identity: 128
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 8-185
Cow position: chr25:31705435-31705257 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 127
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 14, 0

Conread position: 8-185
Cow position: chr25:33100777-33100608 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 142
Alignm E-value: 3e-36
Alignm gaps (pig, cow): 10, 0

Conread position: 8-203
Cow position: chr25:7673511-7673316 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 145
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 47, 19

Conread position: 8-203
Cow position: chr25:26269507-26269702 (view UCSC Genome Browser custom track)
Alignm length: 196
Alignm identity: 141
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 0, 0

Conread position: 8-210
Cow position: chr25:17914991-17914788 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 137
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 8-233
Cow position: chr25:7726871-7726647 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 165
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 11, 0

Conread position: 8-233
Cow position: chr25:12098043-12097825 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 98, 11

Conread position: 8-233
Cow position: chr25:33686475-33686699 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 156
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 186, 178

Conread position: 8-234
Cow position: chr25:432843-433064 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 167
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 10, 0

Conread position: 8-249
Cow position: chr25:4521634-4521866 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 169
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 91, 0

Conread position: 8-270
Cow position: chr25:19679558-19679306 (view UCSC Genome Browser custom track)
Alignm length: 264
Alignm identity: 185
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 242, 11

Conread position: 8-283
Cow position: chr25:8120987-8120714 (view UCSC Genome Browser custom track)
Alignm length: 281
Alignm identity: 182
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 98, 11

Conread position: 9-177
Cow position: chr25:4192213-4192045 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 9-177
Cow position: chr25:6292775-6292608 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 119
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 134, 0

Conread position: 9-222
Cow position: chr25:31657075-31657281 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 155
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 10, 0

Conread position: 9-233
Cow position: chr25:8863181-8863407 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 147
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 39, 0

Conread position: 9-264
Cow position: chr25:19850071-19849811 (view UCSC Genome Browser custom track)
Alignm length: 267
Alignm identity: 179
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 99, 37

Conread position: 9-269
Cow position: chr25:22179116-22178868 (view UCSC Genome Browser custom track)
Alignm length: 261
Alignm identity: 177
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 70, 0

Conread position: 10-175
Cow position: chr25:13380393-13380558 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 121
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 0, 0

Conread position: 10-177
Cow position: chr25:22756817-22756650 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 126
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 37, 26

Conread position: 10-180
Cow position: chr25:18882068-18882238 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 120
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 74, 9

Conread position: 10-185
Cow position: chr25:14164403-14164228 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 134
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 89, 75

Conread position: 10-233
Cow position: chr25:7010765-7010987 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 150
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 108, 0

Conread position: 10-251
Cow position: chr25:28930480-28930726 (view UCSC Genome Browser custom track)
Alignm length: 248
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 212, 168

Conread position: 14-233
Cow position: chr25:11780465-11780263 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 157
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 71, 0

Conread position: 19-126
Cow position: chr25:30462125-30462231 (view UCSC Genome Browser custom track)
Alignm length: 108
Alignm identity: 87
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 30, 0

Conread position: 19-151
Cow position: chr25:12092815-12092681 (view UCSC Genome Browser custom track)
Alignm length: 135
Alignm identity: 102
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 19-158
Cow position: chr25:7864527-7864393 (view UCSC Genome Browser custom track)
Alignm length: 140
Alignm identity: 107
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 93, 0

Conread position: 19-162
Cow position: chr25:13470515-13470658 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 19-163
Cow position: chr25:19460272-19460128 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 19-169
Cow position: chr25:11405997-11405847 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 109
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 19-169
Cow position: chr25:30709149-30709299 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 107
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 19-176
Cow position: chr25:21082210-21082365 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 113
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 71, 0

Conread position: 19-176
Cow position: chr25:32750272-32750117 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 117
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 19-177
Cow position: chr25:10407215-10407373 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 115
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 80, 87

Conread position: 19-177
Cow position: chr25:13542788-13542945 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 116
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 10, 0

Conread position: 19-177
Cow position: chr25:14457348-14457190 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 120
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 0, 0

Conread position: 19-177
Cow position: chr25:33272834-33272674 (view UCSC Genome Browser custom track)
Alignm length: 161
Alignm identity: 121
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 111, 0

Conread position: 19-177
Cow position: chr25:35384140-35384295 (view UCSC Genome Browser custom track)
Alignm length: 159
Alignm identity: 118
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 26, 0

Conread position: 19-184
Cow position: chr25:1509766-1509932 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 11, 103

Conread position: 19-184
Cow position: chr25:11057411-11057247 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 120
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 101, 0

Conread position: 19-184
Cow position: chr25:19832196-19832036 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 119
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 82, 0

Conread position: 19-184
Cow position: chr25:20487239-20487404 (view UCSC Genome Browser custom track)
Alignm length: 166
Alignm identity: 124
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 19-184
Cow position: chr25:22373290-22373456 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 127
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 48, 0

Conread position: 19-184
Cow position: chr25:30319252-30319420 (view UCSC Genome Browser custom track)
Alignm length: 169
Alignm identity: 129
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 89, 0

Conread position: 19-185
Cow position: chr25:18491233-18491071 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 123
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 19-185
Cow position: chr25:26224840-26224996 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 124
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 19-185
Cow position: chr25:26989396-26989230 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 128
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 81, 6

Conread position: 19-187
Cow position: chr25:26643008-26642840 (view UCSC Genome Browser custom track)
Alignm length: 172
Alignm identity: 126
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 73, 94

Conread position: 19-201
Cow position: chr25:31926188-31926360 (view UCSC Genome Browser custom track)
Alignm length: 183
Alignm identity: 131
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 65, 0

Conread position: 19-202
Cow position: chr25:18551137-18551318 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 133
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 88, 0

Conread position: 19-203
Cow position: chr25:15349713-15349890 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 138
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 70, 0

Conread position: 19-203
Cow position: chr25:22315400-22315220 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 130
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 19-203
Cow position: chr25:24115119-24115301 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 136
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 82, 0

Conread position: 19-205
Cow position: chr25:15999354-15999537 (view UCSC Genome Browser custom track)
Alignm length: 188
Alignm identity: 137
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 65, 89

Conread position: 19-210
Cow position: chr25:11957000-11956812 (view UCSC Genome Browser custom track)
Alignm length: 192
Alignm identity: 139
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 88, 0

Conread position: 19-210
Cow position: chr25:17724024-17724216 (view UCSC Genome Browser custom track)
Alignm length: 193
Alignm identity: 139
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 150, 0

Conread position: 19-216
Cow position: chr25:11060331-11060134 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 137
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 62, 99

Conread position: 19-221
Cow position: chr25:23519841-23520031 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 147
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 34, 0

Conread position: 19-222
Cow position: chr25:9573939-9574134 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 71, 0

Conread position: 19-228
Cow position: chr25:20203104-20202903 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 147
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 19-231
Cow position: chr25:36872859-36873069 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 141
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 19-232
Cow position: chr25:13823523-13823733 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 90, 0

Conread position: 19-232
Cow position: chr25:14225563-14225348 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 148
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 89, 0

Conread position: 19-233
Cow position: chr25:3744538-3744760 (view UCSC Genome Browser custom track)
Alignm length: 223
Alignm identity: 153
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 48, 0

Conread position: 19-233
Cow position: chr25:18760515-18760723 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 152
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 81, 0

Conread position: 19-233
Cow position: chr25:22298828-22298622 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 85, 0

Conread position: 19-234
Cow position: chr25:17474317-17474528 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 15, 0

Conread position: 19-234
Cow position: chr25:33101417-33101621 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 154
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 14, 0

Conread position: 19-234
Cow position: chr25:33457921-33457716 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 150
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 19, 0

Conread position: 19-242
Cow position: chr25:24669256-24669470 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 162
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 204, 66

Conread position: 19-248
Cow position: chr25:35762784-35762559 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 167
Alignm E-value: 7e-32
Alignm gaps (pig, cow): 141, 71

Conread position: 19-249
Cow position: chr25:9843377-9843147 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 159
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 55, 28

Conread position: 19-249
Cow position: chr25:16921597-16921830 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 170
Alignm E-value: 1e-38
Alignm gaps (pig, cow): 100, 0

Conread position: 19-249
Cow position: chr25:28423344-28423114 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 159
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 157, 217

Conread position: 19-251
Cow position: chr25:9989906-9990141 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 67, 220

Conread position: 19-251
Cow position: chr25:11897423-11897658 (view UCSC Genome Browser custom track)
Alignm length: 239
Alignm identity: 164
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 175, 160

Conread position: 19-251
Cow position: chr25:18720931-18721151 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 158
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 220, 83

Conread position: 19-251
Cow position: chr25:20523042-20523268 (view UCSC Genome Browser custom track)
Alignm length: 234
Alignm identity: 160
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 212, 33

Conread position: 19-251
Cow position: chr25:20785391-20785623 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 49, 33

Conread position: 19-251
Cow position: chr25:33550708-33550478 (view UCSC Genome Browser custom track)
Alignm length: 236
Alignm identity: 159
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 5, 72

Conread position: 19-251
Cow position: chr25:41150768-41150999 (view UCSC Genome Browser custom track)
Alignm length: 235
Alignm identity: 161
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 109, 93

Conread position: 19-254
Cow position: chr25:9025319-9025087 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 152, 65

Conread position: 19-254
Cow position: chr25:26136624-26136857 (view UCSC Genome Browser custom track)
Alignm length: 237
Alignm identity: 163
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 201, 208

Conread position: 19-256
Cow position: chr25:19130050-19129814 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 164
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 210, 85

Conread position: 19-256
Cow position: chr25:23053759-23053518 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 165
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 74, 112

Conread position: 19-257
Cow position: chr25:9769615-9769378 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 166
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 155, 177

Conread position: 19-261
Cow position: chr25:13272765-13272524 (view UCSC Genome Browser custom track)
Alignm length: 246
Alignm identity: 168
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 89, 70

Conread position: 19-268
Cow position: chr25:21500846-21501095 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 170
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 96, 62

Conread position: 19-269
Cow position: chr25:26524158-26523908 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 173
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 85, 189

Conread position: 19-282
Cow position: chr25:28597408-28597669 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 181
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 51, 191

Conread position: 19-285
Cow position: chr25:33555804-33555539 (view UCSC Genome Browser custom track)
Alignm length: 269
Alignm identity: 177
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 222, 152

Conread position: 20-155
Cow position: chr25:6812032-6812172 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 107
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 40, 0

Conread position: 20-184
Cow position: chr25:14210171-14210017 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 125
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 65, 0

Conread position: 20-196
Cow position: chr25:7684704-7684876 (view UCSC Genome Browser custom track)
Alignm length: 177
Alignm identity: 128
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 20-203
Cow position: chr25:28667855-28668031 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 26, 0

Conread position: 20-228
Cow position: chr25:5808143-5807934 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 151
Alignm E-value: 8e-34
Alignm gaps (pig, cow): 204, 0

Conread position: 20-233
Cow position: chr25:7008115-7007897 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 152
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 64, 116

Conread position: 20-233
Cow position: chr25:17658807-17658596 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 145
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 62, 0

Conread position: 20-233
Cow position: chr25:26679422-26679211 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 81, 0

Conread position: 20-234
Cow position: chr25:21893529-21893322 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 74, 0

Conread position: 21-163
Cow position: chr25:22203495-22203644 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 11, 96

Conread position: 21-164
Cow position: chr25:22642467-22642318 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 112
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 21-177
Cow position: chr25:6061555-6061401 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 115
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 24, 0

Conread position: 21-177
Cow position: chr25:20059853-20060009 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 110
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-177
Cow position: chr25:20085772-20085618 (view UCSC Genome Browser custom track)
Alignm length: 157
Alignm identity: 119
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 81, 0

Conread position: 21-183
Cow position: chr25:9494903-9494740 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 116
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 91, 0

Conread position: 21-185
Cow position: chr25:8410839-8411001 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 131
Alignm E-value: 1e-35
Alignm gaps (pig, cow): 60, 0

Conread position: 21-185
Cow position: chr25:10791625-10791781 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 120
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 0

Conread position: 21-185
Cow position: chr25:13304401-13304565 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 116
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 21-185
Cow position: chr25:21443172-21443336 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-185
Cow position: chr25:27825298-27825134 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 115
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-185
Cow position: chr25:32745529-32745371 (view UCSC Genome Browser custom track)
Alignm length: 165
Alignm identity: 119
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 75, 0

Conread position: 21-187
Cow position: chr25:7311200-7311365 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 128
Alignm E-value: 2e-32
Alignm gaps (pig, cow): 11, 0

Conread position: 21-196
Cow position: chr25:1802805-1802633 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 123
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 83, 0

Conread position: 21-199
Cow position: chr25:3141695-3141522 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 129
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 20, 0

Conread position: 21-204
Cow position: chr25:21287341-21287512 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 134
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 46, 29

Conread position: 21-210
Cow position: chr25:7403144-7403333 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 136
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 0, 0

Conread position: 21-214
Cow position: chr25:14102863-14102670 (view UCSC Genome Browser custom track)
Alignm length: 194
Alignm identity: 129
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 21-231
Cow position: chr25:18201735-18201939 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 151
Alignm E-value: 5e-30
Alignm gaps (pig, cow): 25, 0

Conread position: 21-231
Cow position: chr25:36746254-36746461 (view UCSC Genome Browser custom track)
Alignm length: 212
Alignm identity: 146
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 80, 91

Conread position: 21-233
Cow position: chr25:12260692-12260904 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 144
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 89, 109

Conread position: 21-233
Cow position: chr25:21317224-21317443 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 116, 0

Conread position: 21-234
Cow position: chr25:536109-536322 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 145
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 193, 200

Conread position: 21-234
Cow position: chr25:1838437-1838221 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 163, 89

Conread position: 21-234
Cow position: chr25:33311129-33311343 (view UCSC Genome Browser custom track)
Alignm length: 215
Alignm identity: 146
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 183, 0

Conread position: 21-245
Cow position: chr25:31514378-31514154 (view UCSC Genome Browser custom track)
Alignm length: 225
Alignm identity: 166
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 0, 0

Conread position: 21-246
Cow position: chr25:12657112-12657339 (view UCSC Genome Browser custom track)
Alignm length: 228
Alignm identity: 155
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 212, 0

Conread position: 21-249
Cow position: chr25:6803742-6803513 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 154
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 193, 103

Conread position: 21-250
Cow position: chr25:8898629-8898400 (view UCSC Genome Browser custom track)
Alignm length: 230
Alignm identity: 148
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 0, 0

Conread position: 21-250
Cow position: chr25:26134240-26134008 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 151
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 150, 0

Conread position: 21-255
Cow position: chr25:18487868-18487630 (view UCSC Genome Browser custom track)
Alignm length: 240
Alignm identity: 158
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 22, 98

Conread position: 21-258
Cow position: chr25:5797701-5797467 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 165
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 23, 95

Conread position: 21-260
Cow position: chr25:7817179-7816939 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 88, 20

Conread position: 21-263
Cow position: chr25:6463834-6464075 (view UCSC Genome Browser custom track)
Alignm length: 245
Alignm identity: 166
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 212, 146

Conread position: 21-264
Cow position: chr25:30817086-30816845 (view UCSC Genome Browser custom track)
Alignm length: 244
Alignm identity: 166
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 218, 0

Conread position: 21-269
Cow position: chr25:15565796-15566057 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 174
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 64, 53

Conread position: 21-270
Cow position: chr25:26578406-26578654 (view UCSC Genome Browser custom track)
Alignm length: 253
Alignm identity: 164
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 193, 55

Conread position: 21-271
Cow position: chr25:20664085-20664338 (view UCSC Genome Browser custom track)
Alignm length: 255
Alignm identity: 164
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 212, 245

Conread position: 21-286
Cow position: chr25:8102862-8102601 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 175
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 41, 25

Conread position: 22-162
Cow position: chr25:37648975-37648838 (view UCSC Genome Browser custom track)
Alignm length: 141
Alignm identity: 109
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 80, 0

Conread position: 22-179
Cow position: chr25:9640841-9640998 (view UCSC Genome Browser custom track)
Alignm length: 158
Alignm identity: 114
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 22-185
Cow position: chr25:4157054-4157213 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 123
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 68, 0

Conread position: 22-185
Cow position: chr25:37965456-37965290 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 125
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 93

Conread position: 22-203
Cow position: chr25:11857793-11857972 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 132
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 132, 80

Conread position: 22-233
Cow position: chr25:5846612-5846824 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 147
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 95, 0

Conread position: 22-233
Cow position: chr25:18288577-18288783 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 148
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 176, 68

Conread position: 22-234
Cow position: chr25:26087711-26087503 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 155
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 132, 63

Conread position: 22-248
Cow position: chr25:12637942-12637713 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 152
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 19, 199

Conread position: 22-251
Cow position: chr25:13826624-13826400 (view UCSC Genome Browser custom track)
Alignm length: 232
Alignm identity: 163
Alignm E-value: 5e-29
Alignm gaps (pig, cow): 199, 67

Conread position: 22-254
Cow position: chr25:7799745-7799508 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 166
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 13, 25

Conread position: 23-186
Cow position: chr25:36370013-36369851 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 0

Conread position: 23-186
Cow position: chr25:36375704-36375542 (view UCSC Genome Browser custom track)
Alignm length: 164
Alignm identity: 131
Alignm E-value: 1e-36
Alignm gaps (pig, cow): 132, 0

Conread position: 23-233
Cow position: chr25:17119936-17119728 (view UCSC Genome Browser custom track)
Alignm length: 213
Alignm identity: 157
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 171, 73

Conread position: 24-185
Cow position: chr25:447716-447870 (view UCSC Genome Browser custom track)
Alignm length: 162
Alignm identity: 122
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 12, 0

Conread position: 24-234
Cow position: chr25:26072372-26072573 (view UCSC Genome Browser custom track)
Alignm length: 211
Alignm identity: 147
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 66, 0

Conread position: 24-246
Cow position: chr25:1840512-1840293 (view UCSC Genome Browser custom track)
Alignm length: 226
Alignm identity: 156
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 211, 46

Conread position: 24-251
Cow position: chr25:19363869-19364094 (view UCSC Genome Browser custom track)
Alignm length: 231
Alignm identity: 161
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 104, 66

Conread position: 24-282
Cow position: chr25:13223088-13222839 (view UCSC Genome Browser custom track)
Alignm length: 259
Alignm identity: 179
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 9, 0

Conread position: 25-202
Cow position: chr25:26061534-26061711 (view UCSC Genome Browser custom track)
Alignm length: 179
Alignm identity: 133
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 169, 161

Conread position: 27-177
Cow position: chr25:7005703-7005553 (view UCSC Genome Browser custom track)
Alignm length: 151
Alignm identity: 111
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 27-203
Cow position: chr25:5791525-5791702 (view UCSC Genome Browser custom track)
Alignm length: 178
Alignm identity: 127
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 106, 0

Conread position: 27-233
Cow position: chr25:40904639-40904845 (view UCSC Genome Browser custom track)
Alignm length: 208
Alignm identity: 148
Alignm E-value: 6e-31
Alignm gaps (pig, cow): 167, 159

Conread position: 27-234
Cow position: chr25:6473888-6474103 (view UCSC Genome Browser custom track)
Alignm length: 216
Alignm identity: 151
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 63, 0

Conread position: 27-234
Cow position: chr25:20008322-20008116 (view UCSC Genome Browser custom track)
Alignm length: 209
Alignm identity: 140
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 168, 75

Conread position: 27-264
Cow position: chr25:7380650-7380885 (view UCSC Genome Browser custom track)
Alignm length: 238
Alignm identity: 160
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 27-283
Cow position: chr25:35339002-35339252 (view UCSC Genome Browser custom track)
Alignm length: 258
Alignm identity: 171
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 142, 63

Conread position: 28-250
Cow position: chr25:26306016-26306240 (view UCSC Genome Browser custom track)
Alignm length: 227
Alignm identity: 160
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 196, 73

Conread position: 28-251
Cow position: chr25:8345814-8346032 (view UCSC Genome Browser custom track)
Alignm length: 224
Alignm identity: 153
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 150, 0

Conread position: 29-203
Cow position: chr25:18646766-18646600 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 129
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 165, 60

Conread position: 29-228
Cow position: chr25:36835246-36835438 (view UCSC Genome Browser custom track)
Alignm length: 200
Alignm identity: 137
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 56, 0

Conread position: 29-255
Cow position: chr25:24207226-24207458 (view UCSC Genome Browser custom track)
Alignm length: 233
Alignm identity: 157
Alignm E-value: 9e-24
Alignm gaps (pig, cow): 147, 0

Conread position: 29-258
Cow position: chr25:6682864-6683106 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 69, 0

Conread position: 30-172
Cow position: chr25:36535233-36535374 (view UCSC Genome Browser custom track)
Alignm length: 143
Alignm identity: 106
Alignm E-value: 8e-23
Alignm gaps (pig, cow): 23, 0

Conread position: 30-233
Cow position: chr25:36873152-36873348 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 32-176
Cow position: chr25:22571142-22571000 (view UCSC Genome Browser custom track)
Alignm length: 145
Alignm identity: 109
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 77, 0

Conread position: 32-183
Cow position: chr25:7623005-7622854 (view UCSC Genome Browser custom track)
Alignm length: 152
Alignm identity: 110
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 0, 0

Conread position: 32-203
Cow position: chr25:23323680-23323505 (view UCSC Genome Browser custom track)
Alignm length: 176
Alignm identity: 130
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 0

Conread position: 32-233
Cow position: chr25:23244821-23245017 (view UCSC Genome Browser custom track)
Alignm length: 202
Alignm identity: 144
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 75, 0

Conread position: 32-251
Cow position: chr25:36872546-36872327 (view UCSC Genome Browser custom track)
Alignm length: 222
Alignm identity: 154
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 74, 209

Conread position: 34-186
Cow position: chr25:11855366-11855517 (view UCSC Genome Browser custom track)
Alignm length: 153
Alignm identity: 122
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 137, 0

Conread position: 34-201
Cow position: chr25:2624975-2624813 (view UCSC Genome Browser custom track)
Alignm length: 168
Alignm identity: 120
Alignm E-value: 7e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 38-200
Cow position: chr25:8347830-8347670 (view UCSC Genome Browser custom track)
Alignm length: 163
Alignm identity: 117
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 64, 0

Conread position: 39-267
Cow position: chr25:36073823-36074045 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 150
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 125, 0

Conread position: 43-258
Cow position: chr25:12293572-12293788 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 144
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 190, 207

Conread position: 46-203
Cow position: chr25:10138491-10138333 (view UCSC Genome Browser custom track)
Alignm length: 160
Alignm identity: 114
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 68, 135

Conread position: 47-184
Cow position: chr25:7298725-7298868 (view UCSC Genome Browser custom track)
Alignm length: 144
Alignm identity: 108
Alignm E-value: 6e-21
Alignm gaps (pig, cow): 41, 0

Conread position: 48-176
Cow position: chr25:18568047-18568175 (view UCSC Genome Browser custom track)
Alignm length: 129
Alignm identity: 101
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 0, 0

Conread position: 48-251
Cow position: chr25:9107363-9107560 (view UCSC Genome Browser custom track)
Alignm length: 207
Alignm identity: 150
Alignm E-value: 4e-27
Alignm gaps (pig, cow): 187, 41

Conread position: 48-261
Cow position: chr25:15715039-15714828 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 153
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 151, 64

Conread position: 77-255
Cow position: chr25:38421807-38421626 (view UCSC Genome Browser custom track)
Alignm length: 182
Alignm identity: 126
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 157, 0

Show alignments to all cow chromosomes.