Cow genome map

Conread name: Ss1.1-rnmm19c_k16.5

Conread position: 238-485
Cow position:
Alignm length: 258
Alignm identity: 174
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 34, 137

Conread position: 241-529
Cow position:
Alignm length: 303
Alignm identity: 203
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 123, 159

Conread position: 251-472
Cow position:
Alignm length: 227
Alignm identity: 158
Alignm E-value: 9e-29
Alignm gaps (pig, cow): 113, 47

Conread position: 256-470
Cow position:
Alignm length: 228
Alignm identity: 158
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 16, 49

Conread position: 264-494
Cow position:
Alignm length: 231
Alignm identity: 163
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 120, 0

Conread position: 266-528
Cow position:
Alignm length: 267
Alignm identity: 176
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 117, 19

Conread position: 268-441
Cow position:
Alignm length: 177
Alignm identity: 125
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 22, 160

Conread position: 270-475
Cow position:
Alignm length: 210
Alignm identity: 144
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 94, 12

Conread position: 271-529
Cow position:
Alignm length: 260
Alignm identity: 187
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 170, 118

Conread position: 273-530
Cow position:
Alignm length: 270
Alignm identity: 179
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 26, 150

Conread position: 274-528
Cow position:
Alignm length: 255
Alignm identity: 179
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 31, 0

Conread position: 275-527
Cow position:
Alignm length: 264
Alignm identity: 187
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 13, 140

Conread position: 275-530
Cow position:
Alignm length: 257
Alignm identity: 180
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 150, 35

Conread position: 277-511
Cow position:
Alignm length: 237
Alignm identity: 159
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 36, 99

Conread position: 277-530
Cow position:
Alignm length: 254
Alignm identity: 188
Alignm E-value: 0
Alignm gaps (pig, cow): 158, 0

Conread position: 278-476
Cow position:
Alignm length: 199
Alignm identity: 136
Alignm E-value: 5e-23
Alignm gaps (pig, cow): 48, 0

Conread position: 278-522
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 27, 52

Conread position: 278-522
Cow position:
Alignm length: 249
Alignm identity: 178
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 21, 98

Conread position: 279-522
Cow position:
Alignm length: 254
Alignm identity: 172
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 10, 149

Conread position: 280-505
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 84, 0

Conread position: 280-527
Cow position:
Alignm length: 248
Alignm identity: 168
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 54, 0

Conread position: 280-528
Cow position:
Alignm length: 254
Alignm identity: 174
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 7, 114

Conread position: 281-522
Cow position:
Alignm length: 245
Alignm identity: 172
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 14, 63

Conread position: 281-525
Cow position:
Alignm length: 250
Alignm identity: 186
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 16, 0

Conread position: 282-444
Cow position:
Alignm length: 166
Alignm identity: 119
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 22, 133

Conread position: 282-476
Cow position:
Alignm length: 195
Alignm identity: 134
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 106, 0

Conread position: 282-496
Cow position:
Alignm length: 215
Alignm identity: 141
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 97, 0

Conread position: 282-500
Cow position:
Alignm length: 224
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 21, 141

Conread position: 282-511
Cow position:
Alignm length: 232
Alignm identity: 151
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 98, 126

Conread position: 282-513
Cow position:
Alignm length: 237
Alignm identity: 158
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 108, 20

Conread position: 282-522
Cow position:
Alignm length: 242
Alignm identity: 176
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 14, 0

Conread position: 282-522
Cow position:
Alignm length: 247
Alignm identity: 177
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 196, 82

Conread position: 282-522
Cow position:
Alignm length: 246
Alignm identity: 168
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 72, 157

Conread position: 282-522
Cow position:
Alignm length: 245
Alignm identity: 165
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 23, 0

Conread position: 282-528
Cow position:
Alignm length: 247
Alignm identity: 171
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 13, 0

Conread position: 282-528
Cow position:
Alignm length: 257
Alignm identity: 172
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 112, 123

Conread position: 282-530
Cow position:
Alignm length: 249
Alignm identity: 181
Alignm E-value: 4.00001e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 282-533
Cow position:
Alignm length: 256
Alignm identity: 165
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 101, 16

Conread position: 283-481
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 79, 30

Conread position: 283-493
Cow position:
Alignm length: 214
Alignm identity: 146
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 99, 20

Conread position: 283-522
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 85, 14

Conread position: 283-527
Cow position:
Alignm length: 252
Alignm identity: 175
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 141, 15

Conread position: 283-527
Cow position:
Alignm length: 254
Alignm identity: 177
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 99, 15

Conread position: 284-476
Cow position:
Alignm length: 195
Alignm identity: 137
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 18, 105

Conread position: 284-505
Cow position:
Alignm length: 225
Alignm identity: 163
Alignm E-value: 5e-34
Alignm gaps (pig, cow): 17, 113

Conread position: 285-476
Cow position:
Alignm length: 197
Alignm identity: 139
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 97, 131

Conread position: 285-485
Cow position:
Alignm length: 204
Alignm identity: 146
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 15, 114

Conread position: 285-506
Cow position:
Alignm length: 226
Alignm identity: 160
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 14, 0

Conread position: 285-511
Cow position:
Alignm length: 229
Alignm identity: 161
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 14, 64

Conread position: 285-514
Cow position:
Alignm length: 230
Alignm identity: 179
Alignm E-value: 5.04467e-44
Alignm gaps (pig, cow): 44, 0

Conread position: 285-524
Cow position:
Alignm length: 246
Alignm identity: 165
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 186, 13

Conread position: 285-527
Cow position:
Alignm length: 248
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 121, 0

Conread position: 285-527
Cow position:
Alignm length: 255
Alignm identity: 178
Alignm E-value: 7e-26
Alignm gaps (pig, cow): 79, 182

Conread position: 285-528
Cow position:
Alignm length: 244
Alignm identity: 168
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 285-530
Cow position:
Alignm length: 252
Alignm identity: 177
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 14, 79

Conread position: 285-530
Cow position:
Alignm length: 246
Alignm identity: 181
Alignm E-value: 3.99931e-42
Alignm gaps (pig, cow): 48, 0

Conread position: 286-479
Cow position:
Alignm length: 197
Alignm identity: 137
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 98, 135

Conread position: 286-498
Cow position:
Alignm length: 217
Alignm identity: 150
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 12, 94

Conread position: 286-521
Cow position:
Alignm length: 236
Alignm identity: 165
Alignm E-value: 1e-30
Alignm gaps (pig, cow): 76, 0

Conread position: 286-526
Cow position:
Alignm length: 244
Alignm identity: 167
Alignm E-value: 7e-27
Alignm gaps (pig, cow): 76, 52

Conread position: 286-527
Cow position:
Alignm length: 242
Alignm identity: 175
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 12, 0

Conread position: 286-529
Cow position:
Alignm length: 253
Alignm identity: 169
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 124, 12

Conread position: 287-444
Cow position:
Alignm length: 158
Alignm identity: 115
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 11, 0

Conread position: 287-528
Cow position:
Alignm length: 257
Alignm identity: 184
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 8, 0

Conread position: 288-521
Cow position:
Alignm length: 236
Alignm identity: 168
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 25, 66

Conread position: 288-522
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 189, 14

Conread position: 292-528
Cow position:
Alignm length: 238
Alignm identity: 165
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 149, 38

Conread position: 293-501
Cow position:
Alignm length: 209
Alignm identity: 151
Alignm E-value: 4e-32
Alignm gaps (pig, cow): 69, 0

Conread position: 293-528
Cow position:
Alignm length: 239
Alignm identity: 173
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 12, 70

Conread position: 293-529
Cow position:
Alignm length: 237
Alignm identity: 171
Alignm E-value: 6e-36
Alignm gaps (pig, cow): 5, 0

Conread position: 294-493
Cow position:
Alignm length: 204
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 131, 95

Conread position: 294-527
Cow position:
Alignm length: 238
Alignm identity: 168
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 122, 20

Conread position: 294-528
Cow position:
Alignm length: 239
Alignm identity: 157
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 94, 118

Conread position: 295-511
Cow position:
Alignm length: 217
Alignm identity: 144
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 0, 0

Conread position: 295-528
Cow position:
Alignm length: 234
Alignm identity: 164
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 79, 0

Conread position: 296-520
Cow position:
Alignm length: 226
Alignm identity: 156
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 8, 34

Conread position: 296-530
Cow position:
Alignm length: 244
Alignm identity: 164
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 9, 239

Conread position: 298-452
Cow position:
Alignm length: 155
Alignm identity: 115
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 92, 0

Conread position: 298-476
Cow position:
Alignm length: 187
Alignm identity: 135
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 83, 50

Conread position: 298-495
Cow position:
Alignm length: 200
Alignm identity: 141
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 10, 85

Conread position: 298-506
Cow position:
Alignm length: 210
Alignm identity: 148
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 205, 63

Conread position: 298-510
Cow position:
Alignm length: 213
Alignm identity: 154
Alignm E-value: 5e-33
Alignm gaps (pig, cow): 64, 0

Conread position: 298-520
Cow position:
Alignm length: 226
Alignm identity: 152
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 70, 0

Conread position: 298-521
Cow position:
Alignm length: 224
Alignm identity: 157
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 85, 0

Conread position: 298-522
Cow position:
Alignm length: 229
Alignm identity: 159
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 75, 0

Conread position: 298-522
Cow position:
Alignm length: 230
Alignm identity: 153
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 86, 113

Conread position: 298-522
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 82, 93

Conread position: 298-526
Cow position:
Alignm length: 229
Alignm identity: 162
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 89, 0

Conread position: 298-527
Cow position:
Alignm length: 232
Alignm identity: 153
Alignm E-value: 4e-21
Alignm gaps (pig, cow): 69, 122

Conread position: 298-527
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 298-527
Cow position:
Alignm length: 232
Alignm identity: 173
Alignm E-value: 9e-39
Alignm gaps (pig, cow): 95, 67

Conread position: 298-528
Cow position:
Alignm length: 232
Alignm identity: 167
Alignm E-value: 7e-37
Alignm gaps (pig, cow): 72, 105

Conread position: 298-528
Cow position:
Alignm length: 236
Alignm identity: 156
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 42, 59

Conread position: 298-529
Cow position:
Alignm length: 239
Alignm identity: 164
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 6, 103

Conread position: 298-530
Cow position:
Alignm length: 238
Alignm identity: 161
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 102, 63

Conread position: 299-468
Cow position:
Alignm length: 174
Alignm identity: 123
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 299-522
Cow position:
Alignm length: 224
Alignm identity: 150
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 66, 0

Conread position: 299-528
Cow position:
Alignm length: 230
Alignm identity: 156
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 28, 0

Conread position: 300-506
Cow position:
Alignm length: 207
Alignm identity: 142
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 74, 0

Conread position: 301-522
Cow position:
Alignm length: 222
Alignm identity: 163
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 26, 0

Conread position: 302-518
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 72, 0

Conread position: 302-522
Cow position:
Alignm length: 221
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 60, 0

Conread position: 302-528
Cow position:
Alignm length: 233
Alignm identity: 163
Alignm E-value: 8e-28
Alignm gaps (pig, cow): 63, 47

Conread position: 302-530
Cow position:
Alignm length: 229
Alignm identity: 154
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 0, 0

Conread position: 303-522
Cow position:
Alignm length: 220
Alignm identity: 147
Alignm E-value: 5e-24
Alignm gaps (pig, cow): 71, 0

Conread position: 306-511
Cow position:
Alignm length: 206
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 68, 0

Conread position: 306-527
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 214, 58

Conread position: 307-528
Cow position:
Alignm length: 222
Alignm identity: 158
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 67, 0

Conread position: 311-495
Cow position:
Alignm length: 186
Alignm identity: 135
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 60, 0

Conread position: 312-479
Cow position:
Alignm length: 169
Alignm identity: 123
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 92, 76

Conread position: 312-510
Cow position:
Alignm length: 207
Alignm identity: 141
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 46, 0

Conread position: 312-521
Cow position:
Alignm length: 211
Alignm identity: 154
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 66, 17

Conread position: 312-521
Cow position:
Alignm length: 216
Alignm identity: 159
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 52, 83

Conread position: 312-522
Cow position:
Alignm length: 212
Alignm identity: 149
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 81, 20

Conread position: 312-522
Cow position:
Alignm length: 217
Alignm identity: 151
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 88, 17

Conread position: 312-527
Cow position:
Alignm length: 227
Alignm identity: 159
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 52, 87

Conread position: 318-521
Cow position:
Alignm length: 210
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 51, 106

Conread position: 320-529
Cow position:
Alignm length: 211
Alignm identity: 152
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 54, 27

Conread position: 321-521
Cow position:
Alignm length: 201
Alignm identity: 138
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 85, 0

Conread position: 327-528
Cow position:
Alignm length: 205
Alignm identity: 140
Alignm E-value: 4e-22
Alignm gaps (pig, cow): 50, 176

Conread position: 357-522
Cow position:
Alignm length: 166
Alignm identity: 125
Alignm E-value: 3e-29
Alignm gaps (pig, cow): 33, 0

Conread position: 369-522
Cow position:
Alignm length: 155
Alignm identity: 114
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 15, 44

Conread position: 369-527
Cow position:
Alignm length: 159
Alignm identity: 118
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 19, 0

Conread position: 375-528
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 16, 0

Conread position: 375-528
Cow position:
Alignm length: 154
Alignm identity: 114
Alignm E-value: 6e-25
Alignm gaps (pig, cow): 118, 0

Show alignments to all cow chromosomes.