Cow genome map
| Conread name: | Ss1.1-rnmm19c_k16.5 |
| Conread position: | 254-528 |
| Cow position: | chr15:38652757-38652482 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 159, 172 |
| Conread position: | 255-500 |
| Cow position: | chr15:34223715-34223957 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 62, 41 |
| Conread position: | 256-528 |
| Cow position: | chr15:24616416-24616691 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 31, 14 |
| Conread position: | 267-473 |
| Cow position: | chr15:43674089-43673880 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 13, 90 |
| Conread position: | 272-528 |
| Cow position: | chr15:10088182-10088438 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 10, 101 |
| Conread position: | 273-463 |
| Cow position: | chr15:27976009-27975817 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 273-521 |
| Cow position: | chr15:26442078-26442327 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 273-524 |
| Cow position: | chr15:10400409-10400150 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 95, 25 |
| Conread position: | 273-528 |
| Cow position: | chr15:275512-275772 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 191 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 81, 21 |
| Conread position: | 273-528 |
| Cow position: | chr15:286336-286597 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 273-529 |
| Cow position: | chr15:13432348-13432604 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 183 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 9, 26 |
| Conread position: | 274-484 |
| Cow position: | chr15:46284051-46283842 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 30, 108 |
| Conread position: | 274-527 |
| Cow position: | chr15:15177182-15177434 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 75 |
| Conread position: | 275-530 |
| Cow position: | chr15:795151-794900 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 277-510 |
| Cow position: | chr15:39474066-39473834 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 107, 144 |
| Conread position: | 277-522 |
| Cow position: | chr15:20391406-20391159 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 132, 8 |
| Conread position: | 278-522 |
| Cow position: | chr15:47844217-47843980 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 279-492 |
| Cow position: | chr15:44977685-44977899 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 33 |
| Conread position: | 279-522 |
| Cow position: | chr15:40834983-40835226 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 280-522 |
| Cow position: | chr15:49273834-49274066 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 281-527 |
| Cow position: | chr15:225931-225686 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 8, 103 |
| Conread position: | 281-530 |
| Cow position: | chr15:22532124-22532369 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 177 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 16, 105 |
| Conread position: | 282-475 |
| Cow position: | chr15:20566791-20566978 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 282-479 |
| Cow position: | chr15:52791814-52792007 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 136 |
| Conread position: | 282-482 |
| Cow position: | chr15:44809941-44810142 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 91, 16 |
| Conread position: | 282-505 |
| Cow position: | chr15:49922007-49922230 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 108 |
| Conread position: | 282-517 |
| Cow position: | chr15:11658707-11658466 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 89, 19 |
| Conread position: | 282-520 |
| Cow position: | chr15:12304515-12304749 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 282-522 |
| Cow position: | chr15:51307796-51307569 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 168 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 282-525 |
| Cow position: | chr15:9879508-9879261 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 20, 49 |
| Conread position: | 282-527 |
| Cow position: | chr15:25667351-25667104 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 100, 117 |
| Conread position: | 282-527 |
| Cow position: | chr15:36435080-36435323 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 102, 13 |
| Conread position: | 282-528 |
| Cow position: | chr15:16928215-16927976 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 282-528 |
| Cow position: | chr15:37970677-37970931 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 100, 123 |
| Conread position: | 283-480 |
| Cow position: | chr15:46059229-46059433 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 283-493 |
| Cow position: | chr15:17124595-17124382 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 99, 15 |
| Conread position: | 283-495 |
| Cow position: | chr15:25451878-25452096 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 90, 13 |
| Conread position: | 283-522 |
| Cow position: | chr15:26851347-26851113 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 176, 18 |
| Conread position: | 284-511 |
| Cow position: | chr15:4295630-4295865 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 157 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 284-531 |
| Cow position: | chr15:23572811-23572565 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 100, 14 |
| Conread position: | 285-469 |
| Cow position: | chr15:21942928-21943115 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 125 |
| Conread position: | 285-473 |
| Cow position: | chr15:8331322-8331138 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 15, 50 |
| Conread position: | 285-489 |
| Cow position: | chr15:7811654-7811449 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 96, 113 |
| Conread position: | 285-491 |
| Cow position: | chr15:5409017-5408815 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 199, 77 |
| Conread position: | 285-496 |
| Cow position: | chr15:36422498-36422699 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 151 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 285-498 |
| Cow position: | chr15:15992765-15992554 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 13, 44 |
| Conread position: | 285-517 |
| Cow position: | chr15:19002410-19002168 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 12, 113 |
| Conread position: | 285-520 |
| Cow position: | chr15:4248025-4248259 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 285-522 |
| Cow position: | chr15:20081651-20081884 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 62, 49 |
| Conread position: | 285-528 |
| Cow position: | chr15:30471102-30470853 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 285-529 |
| Cow position: | chr15:13395422-13395667 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 9, 117 |
| Conread position: | 285-529 |
| Cow position: | chr15:52316937-52317173 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 286-494 |
| Cow position: | chr15:41475950-41475745 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 148 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 12, 88 |
| Conread position: | 286-522 |
| Cow position: | chr15:2931694-2931453 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 17, 103 |
| Conread position: | 286-528 |
| Cow position: | chr15:40379089-40379332 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 25, 12 |
| Conread position: | 287-487 |
| Cow position: | chr15:25358112-25358313 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 95, 133 |
| Conread position: | 287-522 |
| Cow position: | chr15:17233065-17233306 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 138 |
| Conread position: | 287-522 |
| Cow position: | chr15:30047675-30047433 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 118 |
| Conread position: | 288-520 |
| Cow position: | chr15:32324328-32324097 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 84, 176 |
| Conread position: | 288-530 |
| Cow position: | chr15:21608842-21608599 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 166 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 97, 10 |
| Conread position: | 291-525 |
| Cow position: | chr15:22938884-22938646 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 78, 132 |
| Conread position: | 294-522 |
| Cow position: | chr15:49131944-49132171 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 9, 81 |
| Conread position: | 294-528 |
| Cow position: | chr15:17084092-17084329 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 88, 127 |
| Conread position: | 295-520 |
| Cow position: | chr15:11909060-11908840 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 140, 0 |
| Conread position: | 296-528 |
| Cow position: | chr15:10442624-10442388 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 11, 202 |
| Conread position: | 298-458 |
| Cow position: | chr15:840257-840099 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 114 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 298-476 |
| Cow position: | chr15:19976437-19976618 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 86, 120 |
| Conread position: | 298-481 |
| Cow position: | chr15:21520032-21520223 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 66, 99 |
| Conread position: | 298-493 |
| Cow position: | chr15:28099001-28099196 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 6, 32 |
| Conread position: | 298-495 |
| Cow position: | chr15:12722974-12723178 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 141 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 298-506 |
| Cow position: | chr15:22531563-22531760 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 298-506 |
| Cow position: | chr15:26529786-26529987 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 298-510 |
| Cow position: | chr15:38827425-38827223 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-520 |
| Cow position: | chr15:36952309-36952093 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 298-522 |
| Cow position: | chr15:11996138-11995914 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 74, 93 |
| Conread position: | 298-522 |
| Cow position: | chr15:14987885-14988102 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 298-522 |
| Cow position: | chr15:20534563-20534337 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 100 |
| Conread position: | 298-522 |
| Cow position: | chr15:21903517-21903297 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 298-522 |
| Cow position: | chr15:31495328-31495111 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 298-522 |
| Cow position: | chr15:31929008-31928783 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 298-522 |
| Cow position: | chr15:36259707-36259491 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 298-522 |
| Cow position: | chr15:36353556-36353781 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 95 |
| Conread position: | 298-522 |
| Cow position: | chr15:46563587-46563372 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 298-523 |
| Cow position: | chr15:43626354-43626583 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 19, 0 |
| Conread position: | 298-526 |
| Cow position: | chr15:24982290-24982061 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 11, 94 |
| Conread position: | 298-527 |
| Cow position: | chr15:36846297-36846059 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 84, 173 |
| Conread position: | 298-528 |
| Cow position: | chr15:1722951-1722733 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-528 |
| Cow position: | chr15:19554036-19553802 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 298-528 |
| Cow position: | chr15:25208869-25208638 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 298-528 |
| Cow position: | chr15:29810015-29810237 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 298-528 |
| Cow position: | chr15:30986396-30986176 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 158, 58 |
| Conread position: | 298-528 |
| Cow position: | chr15:49784391-49784166 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-529 |
| Cow position: | chr15:662574-662347 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 226, 63 |
| Conread position: | 298-530 |
| Cow position: | chr15:8636404-8636172 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 87, 100 |
| Conread position: | 298-530 |
| Cow position: | chr15:20487311-20487082 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 152 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 298-530 |
| Cow position: | chr15:31137575-31137346 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 125, 83 |
| Conread position: | 298-530 |
| Cow position: | chr15:35641902-35642141 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 86, 123 |
| Conread position: | 299-491 |
| Cow position: | chr15:4500589-4500785 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 133 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 299-529 |
| Cow position: | chr15:53716325-53716554 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-38 |
| Alignm gaps (pig, cow): | 85, 64 |
| Conread position: | 301-522 |
| Cow position: | chr15:47042750-47042516 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 34, 100 |
| Conread position: | 301-527 |
| Cow position: | chr15:608036-608264 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 302-474 |
| Cow position: | chr15:40844727-40844554 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 121 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 166, 0 |
| Conread position: | 302-479 |
| Cow position: | chr15:12913605-12913428 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-510 |
| Cow position: | chr15:20459417-20459205 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 142 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 302-520 |
| Cow position: | chr15:36887733-36887946 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 302-526 |
| Cow position: | chr15:3695531-3695749 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 302-527 |
| Cow position: | chr15:31637189-31637419 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 302-528 |
| Cow position: | chr15:37381523-37381743 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 122, 60 |
| Conread position: | 302-529 |
| Cow position: | chr15:24994617-24994393 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 302-529 |
| Cow position: | chr15:50332869-50333101 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 76, 164 |
| Conread position: | 303-522 |
| Cow position: | chr15:21893675-21893891 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 303-528 |
| Cow position: | chr15:39598140-39598361 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 306-527 |
| Cow position: | chr15:244680-244899 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 59, 35 |
| Conread position: | 306-528 |
| Cow position: | chr15:22553643-22553423 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 312-489 |
| Cow position: | chr15:14964256-14964087 (view UCSC Genome Browser custom track) |
| Alignm length: | 178 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 312-506 |
| Cow position: | chr15:26896795-26896597 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 57, 0 |
| Conread position: | 312-520 |
| Cow position: | chr15:9465578-9465788 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 142 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 312-522 |
| Cow position: | chr15:25906822-25907020 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 312-522 |
| Cow position: | chr15:27063613-27063408 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 185, 13 |
| Conread position: | 312-524 |
| Cow position: | chr15:13783064-13782851 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 70, 88 |
| Conread position: | 312-528 |
| Cow position: | chr15:5420978-5420767 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 154 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 146, 63 |
| Conread position: | 312-528 |
| Cow position: | chr15:14888733-14888526 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 53, 0 |
| Conread position: | 312-528 |
| Cow position: | chr15:34896665-34896879 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 38, 70 |
| Conread position: | 312-530 |
| Cow position: | chr15:8353945-8354162 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 8e-37 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 314-512 |
| Cow position: | chr15:26079440-26079251 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 140 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 314-528 |
| Cow position: | chr15:23275439-23275661 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 56, 113 |
| Conread position: | 315-524 |
| Cow position: | chr15:2953226-2953019 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 109, 84 |
| Conread position: | 316-528 |
| Cow position: | chr15:6102253-6102044 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 109, 88 |
| Conread position: | 318-521 |
| Cow position: | chr15:34284500-34284298 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 137 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 112, 72 |
| Conread position: | 318-522 |
| Cow position: | chr15:17762818-17763017 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 141, 0 |
| Conread position: | 318-522 |
| Cow position: | chr15:22930440-22930237 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 91, 30 |
| Conread position: | 318-530 |
| Cow position: | chr15:33306030-33306230 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 328-516 |
| Cow position: | chr15:17337289-17337469 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 137 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 328-528 |
| Cow position: | chr15:4694667-4694862 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 46, 0 |
| Conread position: | 357-522 |
| Cow position: | chr15:40594557-40594392 (view UCSC Genome Browser custom track) |
| Alignm length: | 166 |
| Alignm identity: | 120 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-528 |
| Cow position: | chr15:11912599-11912440 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 365-528 |
| Cow position: | chr15:42789190-42789029 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-28 |
| Alignm gaps (pig, cow): | 148, 25 |
| Conread position: | 369-527 |
| Cow position: | chr15:14176537-14176381 (view UCSC Genome Browser custom track) |
| Alignm length: | 159 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 370-526 |
| Cow position: | chr15:10563542-10563386 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 24, 92 |
| Conread position: | 371-528 |
| Cow position: | chr15:26718958-26718804 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 373-524 |
| Cow position: | chr15:16307387-16307537 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 377-527 |
| Cow position: | chr15:16908403-16908551 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 112 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 380-522 |
| Cow position: | chr15:44237389-44237530 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 105 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
Show alignments to all cow chromosomes.