Cow genome map
| Conread name: | Ss1.1-rnmm19c_k16.5 |
| Conread position: | 246-528 |
| Cow position: | chr17:36814660-36814372 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 12, 56 |
| Conread position: | 255-521 |
| Cow position: | chr17:7959459-7959198 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 218, 30 |
| Conread position: | 255-522 |
| Cow position: | chr17:24786743-24787006 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 49, 10 |
| Conread position: | 261-522 |
| Cow position: | chr17:11664302-11664568 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 192 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 103, 37 |
| Conread position: | 261-528 |
| Cow position: | chr17:5422796-5423058 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 109 |
| Conread position: | 263-530 |
| Cow position: | chr17:25511522-25511253 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 198 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 18, 131 |
| Conread position: | 268-476 |
| Cow position: | chr17:26183618-26183407 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 16, 126 |
| Conread position: | 270-481 |
| Cow position: | chr17:20881552-20881751 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 271-524 |
| Cow position: | chr17:25118153-25117899 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 273-527 |
| Cow position: | chr17:20884794-20884535 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 25, 66 |
| Conread position: | 273-529 |
| Cow position: | chr17:29995170-29995426 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 274-517 |
| Cow position: | chr17:12959357-12959128 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 61, 11 |
| Conread position: | 278-451 |
| Cow position: | chr17:24612908-24612739 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 23, 96 |
| Conread position: | 278-527 |
| Cow position: | chr17:3468012-3467765 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 12, 116 |
| Conread position: | 279-522 |
| Cow position: | chr17:21806191-21806435 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 103, 6 |
| Conread position: | 280-529 |
| Cow position: | chr17:32332835-32333082 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 187 |
| Alignm E-value: | 5.04467e-44 |
| Alignm gaps (pig, cow): | 104, 5 |
| Conread position: | 281-522 |
| Cow position: | chr17:17222599-17222357 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 101, 17 |
| Conread position: | 281-528 |
| Cow position: | chr17:18202019-18201768 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 22, 143 |
| Conread position: | 281-528 |
| Cow position: | chr17:33793409-33793177 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 281-528 |
| Cow position: | chr17:34790808-34791054 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 189, 107 |
| Conread position: | 281-529 |
| Cow position: | chr17:21599423-21599673 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 9, 18 |
| Conread position: | 281-529 |
| Cow position: | chr17:25800628-25800872 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 182 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 192, 17 |
| Conread position: | 281-535 |
| Cow position: | chr17:17044077-17044329 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 24, 83 |
| Conread position: | 282-473 |
| Cow position: | chr17:19543978-19544167 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 102, 16 |
| Conread position: | 282-486 |
| Cow position: | chr17:22081268-22081463 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 282-488 |
| Cow position: | chr17:36467933-36468141 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 92, 16 |
| Conread position: | 282-513 |
| Cow position: | chr17:26757187-26757422 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 282-521 |
| Cow position: | chr17:33288401-33288639 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 19, 108 |
| Conread position: | 282-522 |
| Cow position: | chr17:6318611-6318849 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 21, 109 |
| Conread position: | 282-522 |
| Cow position: | chr17:15102633-15102877 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 282-524 |
| Cow position: | chr17:9965767-9966013 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4e-33 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 282-526 |
| Cow position: | chr17:24587880-24587637 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 21, 109 |
| Conread position: | 282-527 |
| Cow position: | chr17:13940059-13940310 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 282-527 |
| Cow position: | chr17:32418861-32419104 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 282-528 |
| Cow position: | chr17:5280393-5280637 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 21, 113 |
| Conread position: | 282-528 |
| Cow position: | chr17:21325598-21325343 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 282-528 |
| Cow position: | chr17:24613481-24613227 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 82, 123 |
| Conread position: | 282-529 |
| Cow position: | chr17:24824502-24824252 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 190 |
| Alignm E-value: | 9.94922e-44 |
| Alignm gaps (pig, cow): | 89, 47 |
| Conread position: | 282-530 |
| Cow position: | chr17:24841954-24841704 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 53 |
| Conread position: | 283-476 |
| Cow position: | chr17:15154628-15154827 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 142 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 13, 120 |
| Conread position: | 283-505 |
| Cow position: | chr17:22128181-22127956 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 5, 121 |
| Conread position: | 283-528 |
| Cow position: | chr17:25612342-25612101 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 284-424 |
| Cow position: | chr17:20930557-20930417 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 112 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 125, 107 |
| Conread position: | 284-493 |
| Cow position: | chr17:26225283-26225073 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 284-511 |
| Cow position: | chr17:9824920-9824697 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 284-512 |
| Cow position: | chr17:28465682-28465451 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 128 |
| Conread position: | 284-522 |
| Cow position: | chr17:4817783-4817545 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 166 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 284-527 |
| Cow position: | chr17:32471533-32471769 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 27, 81 |
| Conread position: | 285-468 |
| Cow position: | chr17:8663760-8663575 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 111, 137 |
| Conread position: | 285-476 |
| Cow position: | chr17:30900568-30900373 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 285-487 |
| Cow position: | chr17:39964130-39963929 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 99, 13 |
| Conread position: | 285-490 |
| Cow position: | chr17:20359364-20359161 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 115, 13 |
| Conread position: | 285-521 |
| Cow position: | chr17:30728760-30728522 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 174 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 39, 82 |
| Conread position: | 285-522 |
| Cow position: | chr17:15355187-15354948 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 285-522 |
| Cow position: | chr17:32138159-32138407 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 184 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 285-525 |
| Cow position: | chr17:42150641-42150405 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 285-528 |
| Cow position: | chr17:9950401-9950654 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 15, 116 |
| Conread position: | 285-528 |
| Cow position: | chr17:10458682-10458925 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 163 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 198, 13 |
| Conread position: | 285-529 |
| Cow position: | chr17:20801067-20800826 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 84, 47 |
| Conread position: | 285-530 |
| Cow position: | chr17:24559545-24559299 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 102, 17 |
| Conread position: | 285-530 |
| Cow position: | chr17:40772082-40771844 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 241, 18 |
| Conread position: | 286-493 |
| Cow position: | chr17:24947587-24947379 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 96, 112 |
| Conread position: | 286-522 |
| Cow position: | chr17:25342488-25342724 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 138, 133 |
| Conread position: | 286-527 |
| Cow position: | chr17:29084420-29084186 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 17, 48 |
| Conread position: | 286-528 |
| Cow position: | chr17:3389086-3388837 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 78, 183 |
| Conread position: | 287-478 |
| Cow position: | chr17:12963363-12963546 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 136 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 287-500 |
| Cow position: | chr17:21718746-21718958 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 287-527 |
| Cow position: | chr17:27795905-27795660 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 15 |
| Conread position: | 287-528 |
| Cow position: | chr17:25513865-25514111 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 13, 227 |
| Conread position: | 287-529 |
| Cow position: | chr17:20032657-20032902 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 123, 112 |
| Conread position: | 287-533 |
| Cow position: | chr17:5012094-5011845 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 192 |
| Conread position: | 288-492 |
| Cow position: | chr17:10016527-10016326 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 288-528 |
| Cow position: | chr17:33067317-33067551 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 94, 111 |
| Conread position: | 292-520 |
| Cow position: | chr17:33154912-33155135 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 293-528 |
| Cow position: | chr17:4264471-4264234 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-27 |
| Alignm gaps (pig, cow): | 89, 112 |
| Conread position: | 295-521 |
| Cow position: | chr17:24004616-24004390 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 69, 126 |
| Conread position: | 295-521 |
| Cow position: | chr17:25875638-25875414 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 107, 84 |
| Conread position: | 295-527 |
| Cow position: | chr17:20022271-20022502 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 98, 79 |
| Conread position: | 295-530 |
| Cow position: | chr17:24974186-24973950 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 141, 67 |
| Conread position: | 296-475 |
| Cow position: | chr17:20836332-20836155 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 131 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 298-467 |
| Cow position: | chr17:6767017-6767189 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 125 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 24, 112 |
| Conread position: | 298-476 |
| Cow position: | chr17:11920922-11921102 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 85, 111 |
| Conread position: | 298-482 |
| Cow position: | chr17:1081448-1081261 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 66, 124 |
| Conread position: | 298-495 |
| Cow position: | chr17:21677131-21676934 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 147 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-509 |
| Cow position: | chr17:14024388-14024601 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 85, 101 |
| Conread position: | 298-510 |
| Cow position: | chr17:20929484-20929270 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 298-517 |
| Cow position: | chr17:21466018-21466241 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 298-520 |
| Cow position: | chr17:25128114-25128334 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 298-520 |
| Cow position: | chr17:30713586-30713364 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 85, 123 |
| Conread position: | 298-521 |
| Cow position: | chr17:3153328-3153556 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 66, 143 |
| Conread position: | 298-521 |
| Cow position: | chr17:4105752-4105975 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 298-521 |
| Cow position: | chr17:4121487-4121711 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 73, 32 |
| Conread position: | 298-521 |
| Cow position: | chr17:11831878-11832097 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-521 |
| Cow position: | chr17:19783296-19783076 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 84, 101 |
| Conread position: | 298-521 |
| Cow position: | chr17:20157848-20157625 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 298-521 |
| Cow position: | chr17:25473041-25473262 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 298-522 |
| Cow position: | chr17:12325529-12325748 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 15, 66 |
| Conread position: | 298-527 |
| Cow position: | chr17:17035186-17034961 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 8.99999e-40 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 298-527 |
| Cow position: | chr17:20090389-20090625 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 298-527 |
| Cow position: | chr17:33933508-33933733 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-39 |
| Alignm gaps (pig, cow): | 21, 86 |
| Conread position: | 298-528 |
| Cow position: | chr17:908979-908752 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 130, 90 |
| Conread position: | 298-528 |
| Cow position: | chr17:6423994-6423775 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-528 |
| Cow position: | chr17:18934496-18934271 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 298-528 |
| Cow position: | chr17:25126584-25126361 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-528 |
| Cow position: | chr17:40276976-40276751 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 71, 32 |
| Conread position: | 298-529 |
| Cow position: | chr17:17059658-17059435 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-529 |
| Cow position: | chr17:21003591-21003816 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-529 |
| Cow position: | chr17:21039796-21039567 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.96182e-44 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 298-529 |
| Cow position: | chr17:37340791-37341027 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 139, 93 |
| Conread position: | 298-530 |
| Cow position: | chr17:7810506-7810746 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.99995e-41 |
| Alignm gaps (pig, cow): | 6, 0 |
| Conread position: | 299-518 |
| Cow position: | chr17:1634255-1634471 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 299-522 |
| Cow position: | chr17:12946120-12946332 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 299-527 |
| Cow position: | chr17:1025595-1025812 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 147, 63 |
| Conread position: | 300-487 |
| Cow position: | chr17:6787178-6786988 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 300-521 |
| Cow position: | chr17:32143327-32143106 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 82, 185 |
| Conread position: | 300-526 |
| Cow position: | chr17:14025669-14025898 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 150 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 301-530 |
| Cow position: | chr17:40673610-40673381 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 67, 94 |
| Conread position: | 302-486 |
| Cow position: | chr17:7711672-7711490 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 71, 0 |
| Conread position: | 302-511 |
| Cow position: | chr17:946592-946385 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 87, 0 |
| Conread position: | 302-520 |
| Cow position: | chr17:33164584-33164796 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 60, 0 |
| Conread position: | 302-521 |
| Cow position: | chr17:11912269-11912485 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 302-522 |
| Cow position: | chr17:31037141-31037360 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 79, 19 |
| Conread position: | 302-527 |
| Cow position: | chr17:40741890-40741660 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 62, 90 |
| Conread position: | 302-528 |
| Cow position: | chr17:5768130-5767918 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 302-528 |
| Cow position: | chr17:20992802-20993026 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 75, 178 |
| Conread position: | 302-529 |
| Cow position: | chr17:25901444-25901210 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-38 |
| Alignm gaps (pig, cow): | 62, 215 |
| Conread position: | 302-531 |
| Cow position: | chr17:22051355-22051579 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 302-531 |
| Cow position: | chr17:26448779-26448553 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 80, 75 |
| Conread position: | 303-528 |
| Cow position: | chr17:3577762-3577550 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 303-528 |
| Cow position: | chr17:32989708-32989488 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 6e-36 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 303-528 |
| Cow position: | chr17:32993392-32993612 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 305-522 |
| Cow position: | chr17:36864856-36864647 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 306-485 |
| Cow position: | chr17:24767056-24767234 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 85, 0 |
| Conread position: | 306-505 |
| Cow position: | chr17:40412811-40412617 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 98, 77 |
| Conread position: | 306-528 |
| Cow position: | chr17:5372300-5372515 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 160 |
| Alignm E-value: | 4e-32 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 312-495 |
| Cow position: | chr17:44234471-44234294 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 312-518 |
| Cow position: | chr17:23100996-23101198 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 312-521 |
| Cow position: | chr17:28284810-28285010 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 70, 18 |
| Conread position: | 312-522 |
| Cow position: | chr17:1063394-1063193 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 166, 21 |
| Conread position: | 312-522 |
| Cow position: | chr17:24862681-24862475 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 146 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 62, 0 |
| Conread position: | 312-527 |
| Cow position: | chr17:12536248-12536453 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 312-528 |
| Cow position: | chr17:24163260-24163051 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 147 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 313-511 |
| Cow position: | chr17:20848749-20848551 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 142 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 65, 163 |
| Conread position: | 313-528 |
| Cow position: | chr17:21114730-21114943 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-34 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 313-528 |
| Cow position: | chr17:45296631-45296426 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 314-492 |
| Cow position: | chr17:25348590-25348415 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 315-529 |
| Cow position: | chr17:26574999-26575218 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 136, 215 |
| Conread position: | 318-501 |
| Cow position: | chr17:18775969-18776147 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 56, 0 |
| Conread position: | 318-521 |
| Cow position: | chr17:40852188-40851991 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 47 |
| Conread position: | 321-528 |
| Cow position: | chr17:18473380-18473177 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 148 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 348-527 |
| Cow position: | chr17:18108896-18109072 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 139 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 16, 43 |
| Conread position: | 357-520 |
| Cow position: | chr17:29157596-29157438 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 357-529 |
| Cow position: | chr17:4225323-4225489 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 365-519 |
| Cow position: | chr17:15340578-15340734 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 117 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 365-522 |
| Cow position: | chr17:1410065-1410221 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 6e-26 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 365-527 |
| Cow position: | chr17:22016917-22017072 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 121 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 44, 24 |
| Conread position: | 365-527 |
| Cow position: | chr17:24822033-24821873 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 137, 25 |
| Conread position: | 365-530 |
| Cow position: | chr17:24554171-24554005 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 125 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 365-532 |
| Cow position: | chr17:11306384-11306216 (view UCSC Genome Browser custom track) |
| Alignm length: | 170 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 17, 54 |
| Conread position: | 366-525 |
| Cow position: | chr17:18847989-18848144 (view UCSC Genome Browser custom track) |
| Alignm length: | 160 |
| Alignm identity: | 118 |
| Alignm E-value: | 5e-24 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 399-529 |
| Cow position: | chr17:11368710-11368839 (view UCSC Genome Browser custom track) |
| Alignm length: | 131 |
| Alignm identity: | 100 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 40, 0 |
Show alignments to all cow chromosomes.