Cow genome map
| Conread name: | Ss1.1-rnmm19c_k16.5 |
| Conread position: | 257-487 |
| Cow position: | chr18:2144774-2144549 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 167, 38 |
| Conread position: | 261-515 |
| Cow position: | chr18:30340977-30341230 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 28, 222 |
| Conread position: | 261-522 |
| Cow position: | chr18:32600254-32599995 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 23, 5 |
| Conread position: | 261-530 |
| Cow position: | chr18:40759421-40759144 (view UCSC Genome Browser custom track) |
| Alignm length: | 283 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 108, 35 |
| Conread position: | 263-522 |
| Cow position: | chr18:27079066-27078811 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 119, 35 |
| Conread position: | 266-525 |
| Cow position: | chr18:32189319-32189567 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 18, 33 |
| Conread position: | 268-527 |
| Cow position: | chr18:29648975-29648722 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 30, 0 |
| Conread position: | 271-529 |
| Cow position: | chr18:30359948-30360212 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 33, 252 |
| Conread position: | 272-527 |
| Cow position: | chr18:22568876-22569128 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 273-513 |
| Cow position: | chr18:2793785-2794019 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 274-487 |
| Cow position: | chr18:31159081-31159295 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 25, 70 |
| Conread position: | 274-498 |
| Cow position: | chr18:48407925-48407706 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 10, 59 |
| Conread position: | 274-528 |
| Cow position: | chr18:1571049-1571298 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 66, 101 |
| Conread position: | 274-529 |
| Cow position: | chr18:12113179-12113425 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 275-470 |
| Cow position: | chr18:9596363-9596178 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 138 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 275-528 |
| Cow position: | chr18:37189099-37189357 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 177 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 35, 0 |
| Conread position: | 275-529 |
| Cow position: | chr18:14225576-14225328 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 134, 22 |
| Conread position: | 277-530 |
| Cow position: | chr18:52649151-52649413 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 190 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 278-458 |
| Cow position: | chr18:4485783-4485606 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 132 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 11, 85 |
| Conread position: | 278-503 |
| Cow position: | chr18:49161108-49161340 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 31, 130 |
| Conread position: | 278-522 |
| Cow position: | chr18:52251668-52251914 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 106, 143 |
| Conread position: | 278-530 |
| Cow position: | chr18:23630430-23630669 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 189 |
| Alignm E-value: | 4.00001e-41 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 279-479 |
| Cow position: | chr18:46276112-46276316 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 26, 117 |
| Conread position: | 279-527 |
| Cow position: | chr18:16659244-16659494 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 95, 6 |
| Conread position: | 280-511 |
| Cow position: | chr18:6470274-6470049 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 280-529 |
| Cow position: | chr18:10214005-10214255 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 20, 111 |
| Conread position: | 281-525 |
| Cow position: | chr18:9010886-9010646 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 219, 17 |
| Conread position: | 281-529 |
| Cow position: | chr18:4884337-4884581 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 179 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 104, 17 |
| Conread position: | 282-451 |
| Cow position: | chr18:10757877-10758041 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 123 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 70, 19 |
| Conread position: | 282-496 |
| Cow position: | chr18:28322831-28322626 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 282-502 |
| Cow position: | chr18:237932-238153 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 101, 16 |
| Conread position: | 282-506 |
| Cow position: | chr18:37187812-37188038 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 87, 139 |
| Conread position: | 282-513 |
| Cow position: | chr18:44262803-44262583 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 196, 16 |
| Conread position: | 282-520 |
| Cow position: | chr18:43283572-43283811 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 17, 73 |
| Conread position: | 282-522 |
| Cow position: | chr18:12270697-12270445 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 10, 196 |
| Conread position: | 282-522 |
| Cow position: | chr18:20641319-20641553 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 80, 0 |
| Conread position: | 282-522 |
| Cow position: | chr18:49038635-49038405 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 282-527 |
| Cow position: | chr18:18592643-18592411 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 282-528 |
| Cow position: | chr18:18844192-18843950 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 194, 14 |
| Conread position: | 282-528 |
| Cow position: | chr18:42431432-42431674 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 47, 67 |
| Conread position: | 282-530 |
| Cow position: | chr18:15809630-15809865 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 283-515 |
| Cow position: | chr18:12023456-12023686 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 17, 98 |
| Conread position: | 283-519 |
| Cow position: | chr18:50095225-50095452 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 5, 109 |
| Conread position: | 283-522 |
| Cow position: | chr18:42479398-42479643 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 175 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 7, 100 |
| Conread position: | 283-524 |
| Cow position: | chr18:16545281-16545521 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 99, 138 |
| Conread position: | 283-524 |
| Cow position: | chr18:52877532-52877302 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 30, 81 |
| Conread position: | 283-527 |
| Cow position: | chr18:22789910-22790147 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 179 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 104, 15 |
| Conread position: | 283-528 |
| Cow position: | chr18:9089873-9089637 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 177 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 11, 59 |
| Conread position: | 283-528 |
| Cow position: | chr18:50359504-50359270 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 173 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 284-498 |
| Cow position: | chr18:41703014-41702804 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 4e-30 |
| Alignm gaps (pig, cow): | 86, 105 |
| Conread position: | 284-520 |
| Cow position: | chr18:1399169-1399405 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 164 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 29, 192 |
| Conread position: | 284-521 |
| Cow position: | chr18:53053049-53053290 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 80, 144 |
| Conread position: | 284-528 |
| Cow position: | chr18:10977030-10977273 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 25, 106 |
| Conread position: | 284-528 |
| Cow position: | chr18:39662965-39662716 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 19, 140 |
| Conread position: | 285-469 |
| Cow position: | chr18:47419971-47419795 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 285-522 |
| Cow position: | chr18:11867517-11867280 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 150, 102 |
| Conread position: | 285-522 |
| Cow position: | chr18:23446883-23447118 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 97, 18 |
| Conread position: | 285-523 |
| Cow position: | chr18:44917934-44917699 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 19, 65 |
| Conread position: | 285-528 |
| Cow position: | chr18:20126469-20126244 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-26 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 285-528 |
| Cow position: | chr18:32873774-32873527 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 286-469 |
| Cow position: | chr18:22045235-22045417 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 88, 12 |
| Conread position: | 286-479 |
| Cow position: | chr18:5189513-5189707 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 135 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 101, 65 |
| Conread position: | 286-511 |
| Cow position: | chr18:42427793-42427574 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 286-517 |
| Cow position: | chr18:49841462-49841230 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 25, 44 |
| Conread position: | 286-522 |
| Cow position: | chr18:56181279-56181518 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 286-526 |
| Cow position: | chr18:1954400-1954650 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 286-527 |
| Cow position: | chr18:7109312-7109068 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 9, 88 |
| Conread position: | 286-527 |
| Cow position: | chr18:21751557-21751313 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 98, 12 |
| Conread position: | 286-528 |
| Cow position: | chr18:51594636-51594867 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 13, 87 |
| Conread position: | 286-530 |
| Cow position: | chr18:17390811-17391058 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 183 |
| Alignm E-value: | 9.99967e-42 |
| Alignm gaps (pig, cow): | 13, 164 |
| Conread position: | 287-494 |
| Cow position: | chr18:4489723-4489937 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 287-524 |
| Cow position: | chr18:37303333-37303087 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 9, 124 |
| Conread position: | 287-528 |
| Cow position: | chr18:55120044-55119809 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 143, 45 |
| Conread position: | 287-532 |
| Cow position: | chr18:49015291-49015064 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 181 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 290-469 |
| Cow position: | chr18:49441017-49440837 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 131 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 290-529 |
| Cow position: | chr18:14830684-14830908 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 172 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 119, 50 |
| Conread position: | 290-530 |
| Cow position: | chr18:47824600-47824832 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 99, 0 |
| Conread position: | 292-476 |
| Cow position: | chr18:52387047-52387231 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 71, 6 |
| Conread position: | 292-527 |
| Cow position: | chr18:31082169-31082410 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 171 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 293-521 |
| Cow position: | chr18:35534981-35535202 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 131, 10 |
| Conread position: | 293-522 |
| Cow position: | chr18:28930470-28930693 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 69, 0 |
| Conread position: | 293-527 |
| Cow position: | chr18:39623974-39623738 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 91, 5 |
| Conread position: | 294-501 |
| Cow position: | chr18:47801926-47802126 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 294-532 |
| Cow position: | chr18:24719479-24719248 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 19, 71 |
| Conread position: | 295-525 |
| Cow position: | chr18:4555995-4556226 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 168 |
| Conread position: | 295-527 |
| Cow position: | chr18:44909221-44908991 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 128, 105 |
| Conread position: | 295-528 |
| Cow position: | chr18:19868089-19868322 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 73, 99 |
| Conread position: | 297-512 |
| Cow position: | chr18:4152386-4152601 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 65, 93 |
| Conread position: | 298-489 |
| Cow position: | chr18:50004540-50004726 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 298-493 |
| Cow position: | chr18:49602876-49603071 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-32 |
| Alignm gaps (pig, cow): | 126, 121 |
| Conread position: | 298-494 |
| Cow position: | chr18:34444571-34444762 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 140 |
| Alignm E-value: | 9e-27 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 298-511 |
| Cow position: | chr18:45558309-45558101 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 153 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 167, 67 |
| Conread position: | 298-513 |
| Cow position: | chr18:50632279-50632490 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 68, 0 |
| Conread position: | 298-518 |
| Cow position: | chr18:45903730-45903947 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 66, 93 |
| Conread position: | 298-521 |
| Cow position: | chr18:12117687-12117904 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 149, 90 |
| Conread position: | 298-521 |
| Cow position: | chr18:29474904-29474688 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 298-522 |
| Cow position: | chr18:10905013-10904793 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 298-522 |
| Cow position: | chr18:12242443-12242220 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 101, 50 |
| Conread position: | 298-522 |
| Cow position: | chr18:48713708-48713494 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 181, 66 |
| Conread position: | 298-524 |
| Cow position: | chr18:46879994-46880228 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 83, 123 |
| Conread position: | 298-526 |
| Cow position: | chr18:2146426-2146640 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 298-526 |
| Cow position: | chr18:4626624-4626846 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 298-526 |
| Cow position: | chr18:10891677-10891455 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 45, 0 |
| Conread position: | 298-526 |
| Cow position: | chr18:11779819-11779592 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 298-527 |
| Cow position: | chr18:3212046-3211816 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 298-527 |
| Cow position: | chr18:28657750-28657972 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 298-527 |
| Cow position: | chr18:51383232-51383457 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 298-528 |
| Cow position: | chr18:9974164-9974391 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 298-528 |
| Cow position: | chr18:11691240-11691471 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 105, 152 |
| Conread position: | 298-528 |
| Cow position: | chr18:33896248-33896487 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 66, 31 |
| Conread position: | 298-528 |
| Cow position: | chr18:41950379-41950146 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 84, 27 |
| Conread position: | 298-529 |
| Cow position: | chr18:50959655-50959422 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 116, 123 |
| Conread position: | 299-499 |
| Cow position: | chr18:11434917-11434719 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 105, 0 |
| Conread position: | 299-507 |
| Cow position: | chr18:11672218-11672001 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 54, 157 |
| Conread position: | 299-522 |
| Cow position: | chr18:2773222-2773449 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 299-522 |
| Cow position: | chr18:2776725-2776952 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 299-522 |
| Cow position: | chr18:5647973-5647756 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 299-527 |
| Cow position: | chr18:22055695-22055936 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 162 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 299-528 |
| Cow position: | chr18:10576268-10576042 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 91, 105 |
| Conread position: | 299-528 |
| Cow position: | chr18:47547817-47548049 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 30 |
| Conread position: | 300-522 |
| Cow position: | chr18:35367041-35367249 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 115, 29 |
| Conread position: | 300-527 |
| Cow position: | chr18:8949635-8949855 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 300-528 |
| Cow position: | chr18:11791082-11790862 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 300-528 |
| Cow position: | chr18:31556993-31557224 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 84, 110 |
| Conread position: | 301-471 |
| Cow position: | chr18:21143805-21143970 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 157, 60 |
| Conread position: | 302-476 |
| Cow position: | chr18:19809521-19809693 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 122 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 86, 0 |
| Conread position: | 302-500 |
| Cow position: | chr18:41724652-41724853 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 72, 27 |
| Conread position: | 302-516 |
| Cow position: | chr18:9366084-9365868 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 176, 0 |
| Conread position: | 302-520 |
| Cow position: | chr18:9066862-9066643 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 169, 82 |
| Conread position: | 302-522 |
| Cow position: | chr18:6310242-6310026 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 126, 86 |
| Conread position: | 302-528 |
| Cow position: | chr18:38601722-38601948 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 12, 97 |
| Conread position: | 302-529 |
| Cow position: | chr18:32252003-32252231 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 67, 38 |
| Conread position: | 302-529 |
| Cow position: | chr18:42431930-42432156 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 180, 62 |
| Conread position: | 302-530 |
| Cow position: | chr18:33159105-33158878 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 181, 0 |
| Conread position: | 303-529 |
| Cow position: | chr18:43796798-43797017 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 168 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 306-521 |
| Cow position: | chr18:3085349-3085572 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 85, 218 |
| Conread position: | 306-528 |
| Cow position: | chr18:6881200-6881416 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 103, 21 |
| Conread position: | 307-522 |
| Cow position: | chr18:34834653-34834439 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-34 |
| Alignm gaps (pig, cow): | 77, 150 |
| Conread position: | 307-526 |
| Cow position: | chr18:55505560-55505347 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 312-472 |
| Cow position: | chr18:306564-306726 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 312-520 |
| Cow position: | chr18:51643217-51643420 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 312-522 |
| Cow position: | chr18:22516384-22516591 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 114, 77 |
| Conread position: | 312-522 |
| Cow position: | chr18:35874230-35874023 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 36, 89 |
| Conread position: | 312-528 |
| Cow position: | chr18:9040552-9040771 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 77, 56 |
| Conread position: | 312-528 |
| Cow position: | chr18:25598081-25598301 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 156 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 186, 77 |
| Conread position: | 312-529 |
| Cow position: | chr18:7965384-7965169 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 62, 93 |
| Conread position: | 312-530 |
| Cow position: | chr18:15517022-15517235 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 313-495 |
| Cow position: | chr18:43125228-43125056 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 313-528 |
| Cow position: | chr18:15613713-15613923 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 324-528 |
| Cow position: | chr18:28101770-28101571 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 140 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 335-522 |
| Cow position: | chr18:8300154-8299962 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 110 |
| Conread position: | 357-530 |
| Cow position: | chr18:49324332-49324499 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 165, 18 |
| Conread position: | 365-521 |
| Cow position: | chr18:16379024-16378867 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 113 |
| Alignm E-value: | 5e-22 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 365-527 |
| Cow position: | chr18:25647149-25647310 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 126 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 45, 24 |
| Conread position: | 365-527 |
| Cow position: | chr18:46727688-46727527 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 115 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 366-528 |
| Cow position: | chr18:52414066-52413902 (view UCSC Genome Browser custom track) |
| Alignm length: | 165 |
| Alignm identity: | 124 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 371-528 |
| Cow position: | chr18:47512098-47511943 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 115 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 375-522 |
| Cow position: | chr18:28923761-28923904 (view UCSC Genome Browser custom track) |
| Alignm length: | 148 |
| Alignm identity: | 109 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 379-528 |
| Cow position: | chr18:56184019-56183871 (view UCSC Genome Browser custom track) |
| Alignm length: | 151 |
| Alignm identity: | 110 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 127, 11 |
| Conread position: | 384-526 |
| Cow position: | chr18:23505412-23505270 (view UCSC Genome Browser custom track) |
| Alignm length: | 143 |
| Alignm identity: | 106 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 390-528 |
| Cow position: | chr18:11685057-11684919 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 104 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 391-529 |
| Cow position: | chr18:11578148-11578010 (view UCSC Genome Browser custom track) |
| Alignm length: | 140 |
| Alignm identity: | 104 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 78, 73 |
Show alignments to all cow chromosomes.