Cow genome map


           Conread name:
           Ss1.1-rnmm19c_k16.5
        

               Conread position:
               258-528
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               189
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               11, 41
               

               Conread position:
               258-529
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               32, 143
               

               Conread position:
               262-504
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               28, 184
               

               Conread position:
               270-528
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               115, 24
               

               Conread position:
               270-533
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               114, 30
               

               Conread position:
               272-528
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               112, 22
               

               Conread position:
               273-522
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               30, 12
               

               Conread position:
               273-522
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               175
               

               Alignm E-value:
               8e-29
               

               Alignm gaps (pig, cow):
               111, 20
               

               Conread position:
               274-529
               

               Cow position:
               
               

               Alignm length:
               261
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               34, 20
               

               Conread position:
               275-528
               

               Cow position:
               
               

               Alignm length:
               257
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               149, 23
               

               Conread position:
               275-529
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               182
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               107, 47
               

               Conread position:
               276-530
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               176
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               244, 9
               

               Conread position:
               278-528
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               176
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               206, 110
               

               Conread position:
               278-530
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               86, 7
               

               Conread position:
               279-471
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               135
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               55, 0
               

               Conread position:
               280-528
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               281-527
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               19, 116
               

               Conread position:
               281-528
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               183
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               282-466
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               20, 109
               

               Conread position:
               282-475
               

               Cow position:
               
               

               Alignm length:
               201
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               17, 81
               

               Conread position:
               282-520
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               24, 16
               

               Conread position:
               282-521
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               282-522
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               175
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               18, 0
               

               Conread position:
               282-522
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               41, 0
               

               Conread position:
               282-522
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               162
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               282-522
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               22, 68
               

               Conread position:
               282-528
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               24, 146
               

               Conread position:
               282-530
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               180
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               282-530
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               185
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               27, 99
               

               Conread position:
               283-528
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               73, 0
               

               Conread position:
               283-528
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               169
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               99, 15
               

               Conread position:
               284-506
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               163
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               284-525
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               13, 112
               

               Conread position:
               284-527
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               180
               

               Alignm E-value:
               3e-40
               

               Alignm gaps (pig, cow):
               71, 14
               

               Conread position:
               285-458
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               99, 13
               

               Conread position:
               285-526
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               285-528
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               175
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               97, 120
               

               Conread position:
               285-530
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               166, 99
               

               Conread position:
               285-530
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               97, 13
               

               Conread position:
               285-531
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               168
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               97, 13
               

               Conread position:
               286-515
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               286-521
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               165
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               286-524
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               148, 26
               

               Conread position:
               286-527
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               172
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               11, 0
               

               Conread position:
               286-527
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-33
               

               Alignm gaps (pig, cow):
               49, 12
               

               Conread position:
               287-521
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               167
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               95, 118
               

               Conread position:
               287-522
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               170
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               97, 11
               

               Conread position:
               287-522
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               204, 15
               

               Conread position:
               287-528
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               215, 26
               

               Conread position:
               287-528
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               165
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               25, 78
               

               Conread position:
               290-520
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               291-525
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               56, 134
               

               Conread position:
               294-528
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 55
               

               Conread position:
               295-528
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               159
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               296-526
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 7
               

               Conread position:
               296-528
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               228, 0
               

               Conread position:
               298-473
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               128
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               298-487
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               136
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               43, 76
               

               Conread position:
               298-492
               

               Cow position:
               
               

               Alignm length:
               196
               

               Alignm identity:
               141
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               167, 27
               

               Conread position:
               298-493
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               84, 123
               

               Conread position:
               298-505
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               141
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               83, 0
               

               Conread position:
               298-511
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               298-522
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               298-525
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               32, 224
               

               Conread position:
               298-526
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               160
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               298-527
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               159
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               84, 98
               

               Conread position:
               298-527
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               298-527
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               164
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               86, 129
               

               Conread position:
               298-528
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               163
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               155, 90
               

               Conread position:
               298-529
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               164
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               64, 0
               

               Conread position:
               298-529
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               154
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               226, 0
               

               Conread position:
               298-530
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               157
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               84, 126
               

               Conread position:
               298-532
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               84, 124
               

               Conread position:
               299-522
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               74, 0
               

               Conread position:
               299-529
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               175
               

               Alignm E-value:
               8.99999e-40
               

               Alignm gaps (pig, cow):
               110, 64
               

               Conread position:
               300-522
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               300-528
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               65, 0
               

               Conread position:
               302-528
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               169
               

               Alignm E-value:
               9.99995e-41
               

               Alignm gaps (pig, cow):
               107, 0
               

               Conread position:
               303-511
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               151
               

               Alignm E-value:
               9e-30
               

               Alignm gaps (pig, cow):
               121, 71
               

               Conread position:
               306-513
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               151
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               29, 87
               

               Conread position:
               306-515
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               306-529
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               156
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               312-500
               

               Cow position:
               
               

               Alignm length:
               189
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               312-516
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               139
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               78, 0
               

               Conread position:
               312-519
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               159
               

               Alignm E-value:
               8e-39
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               312-525
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               75, 109
               

               Conread position:
               312-528
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               116, 22
               

               Conread position:
               313-511
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               139
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               314-496
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               134
               

               Alignm E-value:
               7e-28
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               314-527
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               156
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               58, 198
               

               Conread position:
               334-502
               

               Cow position:
               
               

               Alignm length:
               169
               

               Alignm identity:
               120
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               49, 0
               

               Conread position:
               338-519
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               129
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               146, 52
               

               Conread position:
               338-527
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               138
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               347-527
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               132
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               365-529
               

               Cow position:
               
               

               Alignm length:
               166
               

               Alignm identity:
               122
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               21, 33
               

               Conread position:
               376-528
               

               Cow position:
               
               

               Alignm length:
               153
               

               Alignm identity:
               112
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               92, 0
               
Show alignments to all cow chromosomes.