Cow genome map
| Conread name: | Ss1.1-rnmm19c_k16.5 |
| Conread position: | 242-527 |
| Cow position: | chr21:37480282-37479990 (view UCSC Genome Browser custom track) |
| Alignm length: | 297 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 204, 42 |
| Conread position: | 254-528 |
| Cow position: | chr21:8426747-8426481 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 195 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 81, 42 |
| Conread position: | 262-510 |
| Cow position: | chr21:40820552-40820801 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 171 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 120, 152 |
| Conread position: | 262-511 |
| Cow position: | chr21:36763362-36763112 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 266-525 |
| Cow position: | chr21:41522117-41522378 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 37, 65 |
| Conread position: | 268-520 |
| Cow position: | chr21:24296474-24296726 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 166 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 146, 30 |
| Conread position: | 270-527 |
| Cow position: | chr21:41974073-41974339 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 34, 213 |
| Conread position: | 272-530 |
| Cow position: | chr21:9477450-9477196 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 149, 22 |
| Conread position: | 274-518 |
| Cow position: | chr21:16570176-16569945 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 55, 0 |
| Conread position: | 274-519 |
| Cow position: | chr21:30592029-30592261 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 274-521 |
| Cow position: | chr21:8430807-8431059 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 173 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 24, 230 |
| Conread position: | 274-522 |
| Cow position: | chr21:45906335-45906582 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 126, 16 |
| Conread position: | 274-527 |
| Cow position: | chr21:22014476-22014225 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 182 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 61, 24 |
| Conread position: | 274-529 |
| Cow position: | chr21:32559083-32559330 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 188 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 90 |
| Conread position: | 275-479 |
| Cow position: | chr21:48482247-48482447 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 275-517 |
| Cow position: | chr21:24858597-24858360 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 276-528 |
| Cow position: | chr21:48527702-48527443 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 20, 178 |
| Conread position: | 276-532 |
| Cow position: | chr21:20213486-20213750 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 175 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 94, 137 |
| Conread position: | 278-515 |
| Cow position: | chr21:6834334-6834096 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 10, 137 |
| Conread position: | 278-527 |
| Cow position: | chr21:12916135-12916386 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 6, 21 |
| Conread position: | 278-528 |
| Cow position: | chr21:33580694-33580454 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 146, 68 |
| Conread position: | 279-468 |
| Cow position: | chr21:44732760-44732949 (view UCSC Genome Browser custom track) |
| Alignm length: | 191 |
| Alignm identity: | 136 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 182 |
| Conread position: | 279-522 |
| Cow position: | chr21:41621409-41621165 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 11, 20 |
| Conread position: | 279-528 |
| Cow position: | chr21:34654352-34654107 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 178 |
| Alignm E-value: | 7e-36 |
| Alignm gaps (pig, cow): | 242, 95 |
| Conread position: | 280-524 |
| Cow position: | chr21:18318994-18318750 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 114 |
| Conread position: | 281-451 |
| Cow position: | chr21:19236688-19236859 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 88, 135 |
| Conread position: | 281-472 |
| Cow position: | chr21:7460887-7460697 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 21, 83 |
| Conread position: | 281-529 |
| Cow position: | chr21:28919248-28919490 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 18, 95 |
| Conread position: | 281-530 |
| Cow position: | chr21:11027078-11027323 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 101, 70 |
| Conread position: | 281-530 |
| Cow position: | chr21:19195879-19196132 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 30, 120 |
| Conread position: | 282-463 |
| Cow position: | chr21:18055851-18056030 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 140, 21 |
| Conread position: | 282-473 |
| Cow position: | chr21:19083306-19083498 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 138 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 87, 126 |
| Conread position: | 282-473 |
| Cow position: | chr21:27744308-27744114 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 82, 115 |
| Conread position: | 282-476 |
| Cow position: | chr21:41738187-41737994 (view UCSC Genome Browser custom track) |
| Alignm length: | 196 |
| Alignm identity: | 133 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 100, 64 |
| Conread position: | 282-487 |
| Cow position: | chr21:12349048-12348840 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 143 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 21, 140 |
| Conread position: | 282-511 |
| Cow position: | chr21:82336-82118 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 282-522 |
| Cow position: | chr21:47326-47080 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 282-522 |
| Cow position: | chr21:27677763-27677522 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 21, 201 |
| Conread position: | 282-522 |
| Cow position: | chr21:44724098-44724328 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 282-522 |
| Cow position: | chr21:44829477-44829719 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 282-522 |
| Cow position: | chr21:47719026-47719259 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-40 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 282-524 |
| Cow position: | chr21:9301504-9301255 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 137, 118 |
| Conread position: | 282-526 |
| Cow position: | chr21:39394028-39393784 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 175 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 40, 109 |
| Conread position: | 282-528 |
| Cow position: | chr21:22718504-22718750 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 101, 68 |
| Conread position: | 282-528 |
| Cow position: | chr21:23979900-23980148 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 129, 139 |
| Conread position: | 282-528 |
| Cow position: | chr21:41610457-41610201 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 173 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 80, 16 |
| Conread position: | 282-528 |
| Cow position: | chr21:48233898-48234134 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 128, 15 |
| Conread position: | 282-530 |
| Cow position: | chr21:13656356-13656604 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 282-530 |
| Cow position: | chr21:16915058-16914804 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 283-487 |
| Cow position: | chr21:745446-745250 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 283-522 |
| Cow position: | chr21:23568502-23568264 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 164 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 119, 15 |
| Conread position: | 283-526 |
| Cow position: | chr21:71863-71623 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 5.00264e-43 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 283-527 |
| Cow position: | chr21:14452511-14452269 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 104, 51 |
| Conread position: | 284-453 |
| Cow position: | chr21:33384223-33384393 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 125 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 90, 14 |
| Conread position: | 284-527 |
| Cow position: | chr21:16498794-16498554 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 16, 77 |
| Conread position: | 284-528 |
| Cow position: | chr21:11739841-11740085 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 27, 69 |
| Conread position: | 284-528 |
| Cow position: | chr21:19868686-19868920 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 284-529 |
| Cow position: | chr21:10264312-10264066 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 90, 130 |
| Conread position: | 285-469 |
| Cow position: | chr21:40930201-40930382 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 285-489 |
| Cow position: | chr21:27810666-27810463 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 285-518 |
| Cow position: | chr21:44825599-44825845 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 79, 65 |
| Conread position: | 285-520 |
| Cow position: | chr21:13580690-13580455 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 285-522 |
| Cow position: | chr21:17890579-17890342 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 139, 134 |
| Conread position: | 285-525 |
| Cow position: | chr21:17874914-17875156 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 136 |
| Conread position: | 285-527 |
| Cow position: | chr21:10817312-10817066 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 11, 116 |
| Conread position: | 285-527 |
| Cow position: | chr21:12104630-12104400 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 285-527 |
| Cow position: | chr21:44658837-44658611 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 285-528 |
| Cow position: | chr21:7169962-7169722 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 285-528 |
| Cow position: | chr21:14464865-14464614 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 19, 127 |
| Conread position: | 285-530 |
| Cow position: | chr21:17559640-17559897 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 176 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 97, 140 |
| Conread position: | 285-530 |
| Cow position: | chr21:42328385-42328635 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 119, 76 |
| Conread position: | 286-469 |
| Cow position: | chr21:19220520-19220705 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 108, 119 |
| Conread position: | 286-476 |
| Cow position: | chr21:18450030-18449839 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 96, 135 |
| Conread position: | 286-500 |
| Cow position: | chr21:20174587-20174380 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 137, 73 |
| Conread position: | 286-518 |
| Cow position: | chr21:41590291-41590521 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-30 |
| Alignm gaps (pig, cow): | 104, 0 |
| Conread position: | 286-521 |
| Cow position: | chr21:42135343-42135575 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 286-522 |
| Cow position: | chr21:20153232-20152996 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 158 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 98, 127 |
| Conread position: | 286-523 |
| Cow position: | chr21:16794070-16793828 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 13, 99 |
| Conread position: | 286-527 |
| Cow position: | chr21:39403254-39403489 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 236, 12 |
| Conread position: | 286-529 |
| Cow position: | chr21:27568883-27569136 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 13, 187 |
| Conread position: | 287-494 |
| Cow position: | chr21:41437885-41437676 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 77, 15 |
| Conread position: | 287-528 |
| Cow position: | chr21:37299734-37299496 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 125, 45 |
| Conread position: | 287-529 |
| Cow position: | chr21:23535986-23535744 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 50, 11 |
| Conread position: | 287-529 |
| Cow position: | chr21:24797928-24797690 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 15, 0 |
| Conread position: | 287-530 |
| Cow position: | chr21:32297234-32297487 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 173 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 288-458 |
| Cow position: | chr21:36398297-36398459 (view UCSC Genome Browser custom track) |
| Alignm length: | 171 |
| Alignm identity: | 126 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 288-510 |
| Cow position: | chr21:28907275-28907492 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 14, 86 |
| Conread position: | 288-527 |
| Cow position: | chr21:28030551-28030324 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 175 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 289-527 |
| Cow position: | chr21:8950464-8950218 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 167 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 81, 9 |
| Conread position: | 290-510 |
| Cow position: | chr21:2536864-2537087 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 12, 103 |
| Conread position: | 293-526 |
| Cow position: | chr21:30222609-30222381 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-39 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 294-511 |
| Cow position: | chr21:40291482-40291695 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 94, 0 |
| Conread position: | 295-479 |
| Cow position: | chr21:27521076-27521256 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 129 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 23, 0 |
| Conread position: | 298-502 |
| Cow position: | chr21:30658124-30657930 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-506 |
| Cow position: | chr21:15012694-15012495 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 155 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 298-509 |
| Cow position: | chr21:11182812-11182606 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 50, 0 |
| Conread position: | 298-509 |
| Cow position: | chr21:25012341-25012135 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 150 |
| Alignm E-value: | 9e-29 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 298-510 |
| Cow position: | chr21:6051768-6051555 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 28, 0 |
| Conread position: | 298-519 |
| Cow position: | chr21:7673376-7673166 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 298-521 |
| Cow position: | chr21:742537-742328 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 298-521 |
| Cow position: | chr21:27229540-27229750 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-522 |
| Cow position: | chr21:957932-957713 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 298-522 |
| Cow position: | chr21:21616039-21615822 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 160 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 104, 31 |
| Conread position: | 298-522 |
| Cow position: | chr21:26018644-26018419 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 86, 101 |
| Conread position: | 298-522 |
| Cow position: | chr21:33982551-33982767 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-524 |
| Cow position: | chr21:14027329-14027100 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 66, 119 |
| Conread position: | 298-524 |
| Cow position: | chr21:20032569-20032800 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-21 |
| Alignm gaps (pig, cow): | 84, 126 |
| Conread position: | 298-527 |
| Cow position: | chr21:643583-643360 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-33 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 298-527 |
| Cow position: | chr21:32339482-32339703 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 298-528 |
| Cow position: | chr21:6713261-6713493 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 178, 92 |
| Conread position: | 298-528 |
| Cow position: | chr21:6851428-6851206 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 298-528 |
| Cow position: | chr21:18059696-18059927 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-25 |
| Alignm gaps (pig, cow): | 84, 108 |
| Conread position: | 298-528 |
| Cow position: | chr21:19702993-19702765 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 126, 65 |
| Conread position: | 298-529 |
| Cow position: | chr21:641847-641620 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 174 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 298-529 |
| Cow position: | chr21:10004620-10004852 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 155 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 84, 160 |
| Conread position: | 298-529 |
| Cow position: | chr21:20163971-20163742 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-35 |
| Alignm gaps (pig, cow): | 19, 45 |
| Conread position: | 299-504 |
| Cow position: | chr21:8506285-8506488 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 299-504 |
| Cow position: | chr21:8509173-8509376 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 90, 0 |
| Conread position: | 299-522 |
| Cow position: | chr21:11644704-11644926 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-35 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 299-522 |
| Cow position: | chr21:29069061-29069287 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-39 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 299-528 |
| Cow position: | chr21:13842755-13842524 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 75, 107 |
| Conread position: | 299-528 |
| Cow position: | chr21:22851177-22850956 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 300-504 |
| Cow position: | chr21:17184179-17183973 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 146 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 171, 189 |
| Conread position: | 300-528 |
| Cow position: | chr21:8349583-8349365 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 300-528 |
| Cow position: | chr21:17252716-17252944 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 84, 171 |
| Conread position: | 301-468 |
| Cow position: | chr21:23673005-23672839 (view UCSC Genome Browser custom track) |
| Alignm length: | 168 |
| Alignm identity: | 119 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 42, 0 |
| Conread position: | 301-530 |
| Cow position: | chr21:24875612-24875385 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 8e-38 |
| Alignm gaps (pig, cow): | 103, 87 |
| Conread position: | 302-520 |
| Cow position: | chr21:46599617-46599403 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 156 |
| Alignm E-value: | 4e-31 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 302-528 |
| Cow position: | chr21:868660-868890 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-28 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 302-529 |
| Cow position: | chr21:29213900-29214127 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-37 |
| Alignm gaps (pig, cow): | 94, 14 |
| Conread position: | 306-466 |
| Cow position: | chr21:8351039-8351197 (view UCSC Genome Browser custom track) |
| Alignm length: | 161 |
| Alignm identity: | 119 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 306-527 |
| Cow position: | chr21:47464864-47465083 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 306-530 |
| Cow position: | chr21:20160933-20160708 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 153 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 307-529 |
| Cow position: | chr21:19240624-19240840 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 156 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 104, 40 |
| Conread position: | 312-527 |
| Cow position: | chr21:41287547-41287758 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-29 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 314-507 |
| Cow position: | chr21:19161962-19161767 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 102 |
| Conread position: | 318-524 |
| Cow position: | chr21:828967-829170 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-31 |
| Alignm gaps (pig, cow): | 129, 71 |
| Conread position: | 336-514 |
| Cow position: | chr21:30243460-30243633 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 126 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 347-528 |
| Cow position: | chr21:9990725-9990545 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 130 |
| Alignm E-value: | 8e-27 |
| Alignm gaps (pig, cow): | 161, 0 |
| Conread position: | 360-527 |
| Cow position: | chr21:5392337-5392501 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 125 |
| Alignm E-value: | 2e-25 |
| Alignm gaps (pig, cow): | 115, 32 |
| Conread position: | 365-519 |
| Cow position: | chr21:5341898-5342051 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 111 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 365-527 |
| Cow position: | chr21:29485173-29485017 (view UCSC Genome Browser custom track) |
| Alignm length: | 163 |
| Alignm identity: | 123 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 365-528 |
| Cow position: | chr21:19359981-19360142 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 122 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 365-528 |
| Cow position: | chr21:33350936-33350776 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 365-528 |
| Cow position: | chr21:42384704-42384542 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 118 |
| Alignm E-value: | 6e-24 |
| Alignm gaps (pig, cow): | 26, 0 |
| Conread position: | 368-522 |
| Cow position: | chr21:30980386-30980537 (view UCSC Genome Browser custom track) |
| Alignm length: | 155 |
| Alignm identity: | 117 |
| Alignm E-value: | 7e-26 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 371-528 |
| Cow position: | chr21:36297683-36297527 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 5e-23 |
| Alignm gaps (pig, cow): | 18, 0 |
| Conread position: | 377-528 |
| Cow position: | chr21:41046991-41046841 (view UCSC Genome Browser custom track) |
| Alignm length: | 152 |
| Alignm identity: | 110 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 380-529 |
| Cow position: | chr21:45262628-45262777 (view UCSC Genome Browser custom track) |
| Alignm length: | 150 |
| Alignm identity: | 114 |
| Alignm E-value: | 8e-28 |
| Alignm gaps (pig, cow): | 0, 0 |
Show alignments to all cow chromosomes.