Cow genome map


           Conread name:
           Ss1.1-rnmm19c_k16.5
        

               Conread position:
               182-511
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               22, 37
               

               Conread position:
               251-520
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               14, 32
               

               Conread position:
               268-528
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               36, 82
               

               Conread position:
               269-528
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               15, 0
               

               Conread position:
               270-504
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               146, 15
               

               Conread position:
               270-529
               

               Cow position:
               
               

               Alignm length:
               263
               

               Alignm identity:
               181
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               29, 60
               

               Conread position:
               271-496
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               153
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               30, 150
               

               Conread position:
               271-529
               

               Cow position:
               
               

               Alignm length:
               260
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               153, 32
               

               Conread position:
               273-526
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               22, 213
               

               Conread position:
               273-529
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               41, 25
               

               Conread position:
               275-527
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               276-524
               

               Cow position:
               
               

               Alignm length:
               254
               

               Alignm identity:
               167
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               20, 132
               

               Conread position:
               277-528
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               179
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               85, 0
               

               Conread position:
               277-529
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               19, 0
               

               Conread position:
               278-489
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               145
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               14, 142
               

               Conread position:
               278-506
               

               Cow position:
               
               

               Alignm length:
               229
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               24, 0
               

               Conread position:
               281-524
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               125, 17
               

               Conread position:
               281-530
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               182
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               240, 25
               

               Conread position:
               282-484
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               142, 50
               

               Conread position:
               282-528
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               7, 124
               

               Conread position:
               282-528
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               181
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               15, 173
               

               Conread position:
               282-528
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               17, 77
               

               Conread position:
               282-529
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               21, 86
               

               Conread position:
               283-521
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               184
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               16, 106
               

               Conread position:
               283-522
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               164
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               26, 85
               

               Conread position:
               283-530
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               101, 138
               

               Conread position:
               284-527
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               182
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               101, 28
               

               Conread position:
               285-458
               

               Cow position:
               
               

               Alignm length:
               174
               

               Alignm identity:
               124
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               104, 0
               

               Conread position:
               285-528
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               179
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               285-528
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               10, 0
               

               Conread position:
               286-487
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               142
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               125, 12
               

               Conread position:
               286-521
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               12, 0
               

               Conread position:
               287-500
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               101, 0
               

               Conread position:
               287-528
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               177
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               83, 171
               

               Conread position:
               287-530
               

               Cow position:
               
               

               Alignm length:
               247
               

               Alignm identity:
               165
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               82, 135
               

               Conread position:
               288-489
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               142
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               16, 102
               

               Conread position:
               288-520
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               22, 10
               

               Conread position:
               293-528
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               162
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               131, 96
               

               Conread position:
               294-530
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               161
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               10, 155
               

               Conread position:
               295-496
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               87, 106
               

               Conread position:
               295-528
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               161
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               295-530
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               160
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               69, 206
               

               Conread position:
               297-522
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               157
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               104, 91
               

               Conread position:
               297-522
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               93, 0
               

               Conread position:
               298-482
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               84, 109
               

               Conread position:
               298-489
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               141
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               298-506
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               146
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               84, 76
               

               Conread position:
               298-522
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               164
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               76, 0
               

               Conread position:
               298-522
               

               Cow position:
               
               

               Alignm length:
               227
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               40, 92
               

               Conread position:
               298-527
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               164
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               27, 0
               

               Conread position:
               298-527
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               298-527
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               166
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               298-528
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               156
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               126, 76
               

               Conread position:
               298-529
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               66, 201
               

               Conread position:
               298-529
               

               Cow position:
               
               

               Alignm length:
               237
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               66, 0
               

               Conread position:
               298-530
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               158
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               298-530
               

               Cow position:
               
               

               Alignm length:
               233
               

               Alignm identity:
               173
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               67, 0
               

               Conread position:
               299-479
               

               Cow position:
               
               

               Alignm length:
               182
               

               Alignm identity:
               132
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               110, 90
               

               Conread position:
               299-522
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               169
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               73, 31
               

               Conread position:
               299-522
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               158
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               131, 79
               

               Conread position:
               301-522
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               147
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               81, 121
               

               Conread position:
               302-479
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               122
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               302-527
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               155
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 20
               

               Conread position:
               302-530
               

               Cow position:
               
               

               Alignm length:
               230
               

               Alignm identity:
               156
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               224, 72
               

               Conread position:
               302-532
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               157
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               87, 0
               

               Conread position:
               306-511
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               140
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               76, 29
               

               Conread position:
               306-527
               

               Cow position:
               
               

               Alignm length:
               224
               

               Alignm identity:
               159
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 87
               

               Conread position:
               312-519
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 102
               

               Conread position:
               312-522
               

               Cow position:
               
               

               Alignm length:
               211
               

               Alignm identity:
               153
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               53, 0
               

               Conread position:
               312-527
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               160
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               313-527
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               155
               

               Alignm E-value:
               7e-29
               

               Alignm gaps (pig, cow):
               69, 150
               

               Conread position:
               315-522
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               149
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               167, 74
               

               Conread position:
               318-520
               

               Cow position:
               
               

               Alignm length:
               207
               

               Alignm identity:
               141
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               46, 0
               

               Conread position:
               318-528
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               155
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               62, 16
               

               Conread position:
               357-520
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               129
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               357-527
               

               Cow position:
               
               

               Alignm length:
               171
               

               Alignm identity:
               125
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               365-513
               

               Cow position:
               
               

               Alignm length:
               149
               

               Alignm identity:
               111
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               365-522
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               115
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               113, 25
               

               Conread position:
               366-525
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               112
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               374-531
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               113
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               19, 0
               
Show alignments to all cow chromosomes.