Cow genome map

Conread name: Ss1.1-rnmm19c_k16.5

Conread position: 252-527
Cow position:
Alignm length: 279
Alignm identity: 181
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 130, 43

Conread position: 257-529
Cow position:
Alignm length: 279
Alignm identity: 201
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 14, 81

Conread position: 258-528
Cow position:
Alignm length: 272
Alignm identity: 178
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 152, 22

Conread position: 261-530
Cow position:
Alignm length: 273
Alignm identity: 179
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 15, 5

Conread position: 263-529
Cow position:
Alignm length: 271
Alignm identity: 195
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 37, 22

Conread position: 266-528
Cow position:
Alignm length: 266
Alignm identity: 175
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 27, 124

Conread position: 267-521
Cow position:
Alignm length: 260
Alignm identity: 170
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 106, 28

Conread position: 269-529
Cow position:
Alignm length: 261
Alignm identity: 184
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 13, 0

Conread position: 271-510
Cow position:
Alignm length: 245
Alignm identity: 163
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 25, 140

Conread position: 272-522
Cow position:
Alignm length: 251
Alignm identity: 175
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 93, 0

Conread position: 272-530
Cow position:
Alignm length: 266
Alignm identity: 179
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 13, 132

Conread position: 273-519
Cow position:
Alignm length: 249
Alignm identity: 170
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 23, 115

Conread position: 274-433
Cow position:
Alignm length: 160
Alignm identity: 119
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 274-522
Cow position:
Alignm length: 251
Alignm identity: 166
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 136, 24

Conread position: 274-524
Cow position:
Alignm length: 255
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 29, 148

Conread position: 274-530
Cow position:
Alignm length: 269
Alignm identity: 185
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 90, 21

Conread position: 275-472
Cow position:
Alignm length: 199
Alignm identity: 135
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 175, 105

Conread position: 276-512
Cow position:
Alignm length: 237
Alignm identity: 160
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 32, 0

Conread position: 276-522
Cow position:
Alignm length: 250
Alignm identity: 162
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 29, 113

Conread position: 277-504
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 97, 18

Conread position: 277-529
Cow position:
Alignm length: 260
Alignm identity: 173
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 18, 54

Conread position: 278-487
Cow position:
Alignm length: 212
Alignm identity: 143
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 28, 49

Conread position: 278-536
Cow position:
Alignm length: 266
Alignm identity: 173
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 67, 107

Conread position: 279-511
Cow position:
Alignm length: 237
Alignm identity: 165
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 20, 93

Conread position: 279-527
Cow position:
Alignm length: 252
Alignm identity: 174
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 10, 0

Conread position: 281-520
Cow position:
Alignm length: 244
Alignm identity: 161
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 7, 18

Conread position: 281-526
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 156, 17

Conread position: 281-528
Cow position:
Alignm length: 255
Alignm identity: 170
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 15, 0

Conread position: 282-489
Cow position:
Alignm length: 209
Alignm identity: 148
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 106, 79

Conread position: 282-490
Cow position:
Alignm length: 212
Alignm identity: 143
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 86, 140

Conread position: 282-496
Cow position:
Alignm length: 215
Alignm identity: 158
Alignm E-value: 4e-36
Alignm gaps (pig, cow): 107, 0

Conread position: 282-517
Cow position:
Alignm length: 237
Alignm identity: 169
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 16, 93

Conread position: 282-527
Cow position:
Alignm length: 251
Alignm identity: 167
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 100, 13

Conread position: 282-528
Cow position:
Alignm length: 247
Alignm identity: 176
Alignm E-value: 4e-35
Alignm gaps (pig, cow): 16, 0

Conread position: 282-529
Cow position:
Alignm length: 256
Alignm identity: 174
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 13, 81

Conread position: 282-529
Cow position:
Alignm length: 248
Alignm identity: 174
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 71, 0

Conread position: 283-462
Cow position:
Alignm length: 181
Alignm identity: 127
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 99, 15

Conread position: 283-506
Cow position:
Alignm length: 226
Alignm identity: 159
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 17, 100

Conread position: 283-519
Cow position:
Alignm length: 249
Alignm identity: 172
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 80, 20

Conread position: 284-528
Cow position:
Alignm length: 248
Alignm identity: 179
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 140, 26

Conread position: 285-475
Cow position:
Alignm length: 199
Alignm identity: 139
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 88, 44

Conread position: 285-475
Cow position:
Alignm length: 191
Alignm identity: 131
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 18, 0

Conread position: 285-476
Cow position:
Alignm length: 197
Alignm identity: 135
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 118, 0

Conread position: 285-520
Cow position:
Alignm length: 240
Alignm identity: 164
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 11, 79

Conread position: 285-520
Cow position:
Alignm length: 240
Alignm identity: 168
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 19, 0

Conread position: 285-526
Cow position:
Alignm length: 256
Alignm identity: 177
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 14, 173

Conread position: 285-526
Cow position:
Alignm length: 242
Alignm identity: 172
Alignm E-value: 7e-31
Alignm gaps (pig, cow): 79, 0

Conread position: 286-495
Cow position:
Alignm length: 210
Alignm identity: 151
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 149, 0

Conread position: 286-518
Cow position:
Alignm length: 233
Alignm identity: 161
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 87, 0

Conread position: 286-526
Cow position:
Alignm length: 241
Alignm identity: 174
Alignm E-value: 6e-39
Alignm gaps (pig, cow): 88, 0

Conread position: 286-528
Cow position:
Alignm length: 245
Alignm identity: 177
Alignm E-value: 3e-33
Alignm gaps (pig, cow): 10, 45

Conread position: 286-528
Cow position:
Alignm length: 243
Alignm identity: 167
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 47, 0

Conread position: 287-479
Cow position:
Alignm length: 197
Alignm identity: 138
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 8, 135

Conread position: 287-492
Cow position:
Alignm length: 206
Alignm identity: 151
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 11, 0

Conread position: 287-527
Cow position:
Alignm length: 247
Alignm identity: 165
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 132, 11

Conread position: 287-528
Cow position:
Alignm length: 242
Alignm identity: 163
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 69, 0

Conread position: 287-528
Cow position:
Alignm length: 243
Alignm identity: 178
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 9, 0

Conread position: 287-528
Cow position:
Alignm length: 247
Alignm identity: 172
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 86, 116

Conread position: 288-458
Cow position:
Alignm length: 171
Alignm identity: 121
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 101, 0

Conread position: 290-458
Cow position:
Alignm length: 169
Alignm identity: 124
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 99, 0

Conread position: 290-506
Cow position:
Alignm length: 218
Alignm identity: 152
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 9, 73

Conread position: 290-528
Cow position:
Alignm length: 246
Alignm identity: 169
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 51, 92

Conread position: 292-528
Cow position:
Alignm length: 237
Alignm identity: 163
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 37, 0

Conread position: 292-530
Cow position:
Alignm length: 241
Alignm identity: 165
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 82, 63

Conread position: 293-505
Cow position:
Alignm length: 214
Alignm identity: 153
Alignm E-value: 7e-30
Alignm gaps (pig, cow): 175, 40

Conread position: 293-522
Cow position:
Alignm length: 242
Alignm identity: 168
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 47, 175

Conread position: 293-526
Cow position:
Alignm length: 234
Alignm identity: 176
Alignm E-value: 0
Alignm gaps (pig, cow): 0, 0

Conread position: 293-529
Cow position:
Alignm length: 238
Alignm identity: 163
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 131, 5

Conread position: 295-479
Cow position:
Alignm length: 186
Alignm identity: 127
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 89, 113

Conread position: 295-502
Cow position:
Alignm length: 209
Alignm identity: 142
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 130, 94

Conread position: 295-531
Cow position:
Alignm length: 242
Alignm identity: 159
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 100, 115

Conread position: 296-528
Cow position:
Alignm length: 234
Alignm identity: 162
Alignm E-value: 6e-29
Alignm gaps (pig, cow): 7, 67

Conread position: 296-528
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 72, 83

Conread position: 297-522
Cow position:
Alignm length: 226
Alignm identity: 162
Alignm E-value: 1e-34
Alignm gaps (pig, cow): 92, 0

Conread position: 298-467
Cow position:
Alignm length: 172
Alignm identity: 123
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 68, 93

Conread position: 298-506
Cow position:
Alignm length: 209
Alignm identity: 136
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 0, 0

Conread position: 298-518
Cow position:
Alignm length: 223
Alignm identity: 156
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 117, 183

Conread position: 298-518
Cow position:
Alignm length: 222
Alignm identity: 155
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 169, 38

Conread position: 298-519
Cow position:
Alignm length: 222
Alignm identity: 159
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 65, 0

Conread position: 298-522
Cow position:
Alignm length: 225
Alignm identity: 167
Alignm E-value: 7.00005e-41
Alignm gaps (pig, cow): 91, 0

Conread position: 298-522
Cow position:
Alignm length: 228
Alignm identity: 151
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 66, 118

Conread position: 298-522
Cow position:
Alignm length: 225
Alignm identity: 156
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 76, 0

Conread position: 298-524
Cow position:
Alignm length: 227
Alignm identity: 154
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 73, 0

Conread position: 298-527
Cow position:
Alignm length: 232
Alignm identity: 152
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 86, 0

Conread position: 298-527
Cow position:
Alignm length: 235
Alignm identity: 155
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 79, 123

Conread position: 298-527
Cow position:
Alignm length: 230
Alignm identity: 158
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 64, 0

Conread position: 298-528
Cow position:
Alignm length: 231
Alignm identity: 169
Alignm E-value: 6e-40
Alignm gaps (pig, cow): 91, 0

Conread position: 298-528
Cow position:
Alignm length: 231
Alignm identity: 156
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 54, 0

Conread position: 298-529
Cow position:
Alignm length: 232
Alignm identity: 161
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 76, 0

Conread position: 298-532
Cow position:
Alignm length: 241
Alignm identity: 167
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 66, 97

Conread position: 299-473
Cow position:
Alignm length: 178
Alignm identity: 124
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 83, 122

Conread position: 299-502
Cow position:
Alignm length: 205
Alignm identity: 149
Alignm E-value: 9e-33
Alignm gaps (pig, cow): 20, 92

Conread position: 299-521
Cow position:
Alignm length: 223
Alignm identity: 157
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 33, 0

Conread position: 299-530
Cow position:
Alignm length: 232
Alignm identity: 163
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 90, 0

Conread position: 300-444
Cow position:
Alignm length: 145
Alignm identity: 107
Alignm E-value: 9e-22
Alignm gaps (pig, cow): 89, 0

Conread position: 300-528
Cow position:
Alignm length: 237
Alignm identity: 161
Alignm E-value: 3e-23
Alignm gaps (pig, cow): 57, 145

Conread position: 302-504
Cow position:
Alignm length: 203
Alignm identity: 139
Alignm E-value: 9e-23
Alignm gaps (pig, cow): 60, 0

Conread position: 302-518
Cow position:
Alignm length: 217
Alignm identity: 145
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 89, 0

Conread position: 302-525
Cow position:
Alignm length: 227
Alignm identity: 157
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 187, 53

Conread position: 302-528
Cow position:
Alignm length: 232
Alignm identity: 154
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 80, 103

Conread position: 306-496
Cow position:
Alignm length: 193
Alignm identity: 136
Alignm E-value: 4e-25
Alignm gaps (pig, cow): 58, 155

Conread position: 307-493
Cow position:
Alignm length: 187
Alignm identity: 133
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 152, 0

Conread position: 311-529
Cow position:
Alignm length: 219
Alignm identity: 158
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 29, 0

Conread position: 312-509
Cow position:
Alignm length: 204
Alignm identity: 143
Alignm E-value: 1e-25
Alignm gaps (pig, cow): 50, 185

Conread position: 312-517
Cow position:
Alignm length: 212
Alignm identity: 146
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 62, 0

Conread position: 312-527
Cow position:
Alignm length: 220
Alignm identity: 153
Alignm E-value: 4e-26
Alignm gaps (pig, cow): 57, 87

Conread position: 312-528
Cow position:
Alignm length: 219
Alignm identity: 154
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 49, 54

Conread position: 312-529
Cow position:
Alignm length: 223
Alignm identity: 160
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 61, 152

Conread position: 312-530
Cow position:
Alignm length: 220
Alignm identity: 157
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 68, 165

Conread position: 313-528
Cow position:
Alignm length: 220
Alignm identity: 151
Alignm E-value: 5e-27
Alignm gaps (pig, cow): 71, 0

Conread position: 314-522
Cow position:
Alignm length: 213
Alignm identity: 149
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 82, 0

Conread position: 315-528
Cow position:
Alignm length: 215
Alignm identity: 152
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 73, 98

Conread position: 320-528
Cow position:
Alignm length: 209
Alignm identity: 158
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 45, 0

Conread position: 335-528
Cow position:
Alignm length: 194
Alignm identity: 137
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 38, 0

Conread position: 359-528
Cow position:
Alignm length: 170
Alignm identity: 121
Alignm E-value: 8e-21
Alignm gaps (pig, cow): 32, 0

Conread position: 365-527
Cow position:
Alignm length: 163
Alignm identity: 117
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 12, 0

Conread position: 365-528
Cow position:
Alignm length: 164
Alignm identity: 119
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 95, 0

Conread position: 365-528
Cow position:
Alignm length: 164
Alignm identity: 123
Alignm E-value: 5e-28
Alignm gaps (pig, cow): 24, 0

Conread position: 365-528
Cow position:
Alignm length: 164
Alignm identity: 121
Alignm E-value: 1e-26
Alignm gaps (pig, cow): 25, 0

Conread position: 371-529
Cow position:
Alignm length: 163
Alignm identity: 119
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 44, 18

Show alignments to all cow chromosomes.