Cow genome map
| Conread name: | Ss1.1-rnmm19c_k16.5 |
| Conread position: | 238-479 |
| Cow position: | chr28:10203374-10203143 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 161 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 259-522 |
| Cow position: | chr28:24966633-24966368 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 186 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 28, 133 |
| Conread position: | 260-511 |
| Cow position: | chr28:18797552-18797312 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 261-474 |
| Cow position: | chr28:17943960-17943759 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 9, 31 |
| Conread position: | 261-500 |
| Cow position: | chr28:16856865-16857104 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 158 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 141, 146 |
| Conread position: | 264-513 |
| Cow position: | chr28:20174077-20173826 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 168 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 35, 136 |
| Conread position: | 266-527 |
| Cow position: | chr28:4282251-4282514 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 174 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 12, 219 |
| Conread position: | 267-528 |
| Cow position: | chr28:33884641-33884379 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 14, 127 |
| Conread position: | 270-528 |
| Cow position: | chr28:10863569-10863809 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 175 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 33, 13 |
| Conread position: | 272-528 |
| Cow position: | chr28:6975462-6975216 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 183 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 273-513 |
| Cow position: | chr28:26810908-26810669 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 93, 25 |
| Conread position: | 274-458 |
| Cow position: | chr28:4866348-4866528 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 26, 90 |
| Conread position: | 274-478 |
| Cow position: | chr28:8936377-8936175 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 148 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 29, 111 |
| Conread position: | 274-522 |
| Cow position: | chr28:14998294-14998048 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 35, 86 |
| Conread position: | 274-522 |
| Cow position: | chr28:16204107-16204353 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 175 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 122, 11 |
| Conread position: | 274-528 |
| Cow position: | chr28:7350878-7350629 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 185 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 275-486 |
| Cow position: | chr28:3678585-3678378 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 209, 23 |
| Conread position: | 275-490 |
| Cow position: | chr28:7964449-7964664 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 28, 122 |
| Conread position: | 275-510 |
| Cow position: | chr28:19262358-19262594 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 97, 23 |
| Conread position: | 275-525 |
| Cow position: | chr28:6091582-6091336 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 183, 23 |
| Conread position: | 275-525 |
| Cow position: | chr28:11079535-11079286 (view UCSC Genome Browser custom track) |
| Alignm length: | 261 |
| Alignm identity: | 187 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 27, 83 |
| Conread position: | 275-528 |
| Cow position: | chr28:17948889-17949138 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 14, 88 |
| Conread position: | 276-473 |
| Cow position: | chr28:29661981-29661783 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 141 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 107, 122 |
| Conread position: | 279-487 |
| Cow position: | chr28:11411317-11411517 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 123, 6 |
| Conread position: | 281-522 |
| Cow position: | chr28:8304464-8304228 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-37 |
| Alignm gaps (pig, cow): | 23, 82 |
| Conread position: | 281-527 |
| Cow position: | chr28:29988886-29989143 (view UCSC Genome Browser custom track) |
| Alignm length: | 259 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 18, 121 |
| Conread position: | 281-529 |
| Cow position: | chr28:31841125-31841370 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 163 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 35, 132 |
| Conread position: | 282-493 |
| Cow position: | chr28:8716161-8716379 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 82, 20 |
| Conread position: | 282-503 |
| Cow position: | chr28:4876655-4876443 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 157 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 282-520 |
| Cow position: | chr28:10615734-10615963 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 160 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 282-521 |
| Cow position: | chr28:11059711-11059483 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 142, 91 |
| Conread position: | 282-522 |
| Cow position: | chr28:8347950-8347712 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 129, 12 |
| Conread position: | 282-522 |
| Cow position: | chr28:29416503-29416735 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 84 |
| Conread position: | 282-527 |
| Cow position: | chr28:11197455-11197694 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 102, 14 |
| Conread position: | 282-528 |
| Cow position: | chr28:20125001-20124759 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 186, 83 |
| Conread position: | 282-528 |
| Cow position: | chr28:21845171-21844933 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 6, 17 |
| Conread position: | 282-530 |
| Cow position: | chr28:5200046-5199793 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 179 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 283-466 |
| Cow position: | chr28:10763107-10762931 (view UCSC Genome Browser custom track) |
| Alignm length: | 184 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 283-511 |
| Cow position: | chr28:5236093-5235873 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 106, 0 |
| Conread position: | 283-522 |
| Cow position: | chr28:3492565-3492802 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 176 |
| Alignm E-value: | 5e-37 |
| Alignm gaps (pig, cow): | 11, 82 |
| Conread position: | 283-523 |
| Cow position: | chr28:29850604-29850835 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 176 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 46, 15 |
| Conread position: | 283-527 |
| Cow position: | chr28:9705876-9705629 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 20, 182 |
| Conread position: | 283-529 |
| Cow position: | chr28:10669806-10669551 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 86, 126 |
| Conread position: | 283-530 |
| Cow position: | chr28:5144294-5144549 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 172 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 283-530 |
| Cow position: | chr28:7131873-7132113 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 162, 13 |
| Conread position: | 284-528 |
| Cow position: | chr28:11884313-11884548 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 229, 45 |
| Conread position: | 285-444 |
| Cow position: | chr28:3257210-3257047 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 117 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 285-500 |
| Cow position: | chr28:19994729-19994943 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 87, 114 |
| Conread position: | 285-522 |
| Cow position: | chr28:4159181-4158936 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 285-522 |
| Cow position: | chr28:5255088-5254855 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 179 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 88, 0 |
| Conread position: | 285-526 |
| Cow position: | chr28:2960598-2960854 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 11, 45 |
| Conread position: | 285-527 |
| Cow position: | chr28:9636242-9636481 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 179 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 47, 13 |
| Conread position: | 285-528 |
| Cow position: | chr28:3445262-3445505 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 25, 99 |
| Conread position: | 285-528 |
| Cow position: | chr28:5138780-5139016 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 15, 79 |
| Conread position: | 285-528 |
| Cow position: | chr28:7618943-7619175 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 58, 0 |
| Conread position: | 285-528 |
| Cow position: | chr28:11426330-11426565 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 14, 80 |
| Conread position: | 285-528 |
| Cow position: | chr28:11762915-11762668 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 97, 127 |
| Conread position: | 285-528 |
| Cow position: | chr28:34430207-34430448 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 95, 13 |
| Conread position: | 285-529 |
| Cow position: | chr28:4016742-4016507 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 174 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 15, 46 |
| Conread position: | 286-458 |
| Cow position: | chr28:3759213-3759035 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 131 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 286-479 |
| Cow position: | chr28:22085330-22085518 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 138, 22 |
| Conread position: | 286-490 |
| Cow position: | chr28:26530654-26530853 (view UCSC Genome Browser custom track) |
| Alignm length: | 205 |
| Alignm identity: | 144 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 12, 0 |
| Conread position: | 286-522 |
| Cow position: | chr28:11527045-11527277 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 78, 12 |
| Conread position: | 287-528 |
| Cow position: | chr28:3406197-3406434 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 95, 107 |
| Conread position: | 288-506 |
| Cow position: | chr28:30902334-30902123 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 288-522 |
| Cow position: | chr28:11016617-11016389 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 165 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 168, 10 |
| Conread position: | 288-529 |
| Cow position: | chr28:11346275-11346513 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 136, 85 |
| Conread position: | 290-453 |
| Cow position: | chr28:24238272-24238427 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 120 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 290-496 |
| Cow position: | chr28:10890530-10890728 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 147 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 290-522 |
| Cow position: | chr28:3023704-3023932 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 50, 85 |
| Conread position: | 290-527 |
| Cow position: | chr28:3746409-3746173 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 167 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 188, 75 |
| Conread position: | 290-527 |
| Cow position: | chr28:9285165-9285394 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 290-531 |
| Cow position: | chr28:4186115-4185878 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 134, 71 |
| Conread position: | 293-528 |
| Cow position: | chr28:3410780-3411012 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 166 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 139, 88 |
| Conread position: | 294-491 |
| Cow position: | chr28:2777738-2777542 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 294-528 |
| Cow position: | chr28:9426144-9426375 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 295-479 |
| Cow position: | chr28:32014992-32014808 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 128 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 129, 124 |
| Conread position: | 295-492 |
| Cow position: | chr28:5674079-5673886 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 295-511 |
| Cow position: | chr28:6563687-6563906 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 295-522 |
| Cow position: | chr28:5684907-5684685 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 295-523 |
| Cow position: | chr28:11866461-11866685 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 157 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 118, 79 |
| Conread position: | 295-528 |
| Cow position: | chr28:5436879-5437110 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 69, 132 |
| Conread position: | 295-528 |
| Cow position: | chr28:5630306-5630073 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 89, 104 |
| Conread position: | 296-416 |
| Cow position: | chr28:1825606-1825488 (view UCSC Genome Browser custom track) |
| Alignm length: | 121 |
| Alignm identity: | 94 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 296-528 |
| Cow position: | chr28:4006987-4006762 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 114, 77 |
| Conread position: | 296-529 |
| Cow position: | chr28:8140690-8140456 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 68, 38 |
| Conread position: | 298-458 |
| Cow position: | chr28:4077133-4077301 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 121 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-511 |
| Cow position: | chr28:4823805-4823596 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 82, 41 |
| Conread position: | 298-511 |
| Cow position: | chr28:17680829-17680614 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 113, 0 |
| Conread position: | 298-512 |
| Cow position: | chr28:7557523-7557743 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 159 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 21, 100 |
| Conread position: | 298-520 |
| Cow position: | chr28:4013287-4013067 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 166 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 92, 0 |
| Conread position: | 298-521 |
| Cow position: | chr28:17740029-17739807 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-39 |
| Alignm gaps (pig, cow): | 84, 177 |
| Conread position: | 298-522 |
| Cow position: | chr28:4071162-4070948 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 166 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 185, 27 |
| Conread position: | 298-522 |
| Cow position: | chr28:4182205-4181982 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 298-527 |
| Cow position: | chr28:3726004-3726235 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 165 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 39, 85 |
| Conread position: | 298-527 |
| Cow position: | chr28:4884049-4884278 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 147, 93 |
| Conread position: | 298-527 |
| Cow position: | chr28:16918970-16919191 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-36 |
| Alignm gaps (pig, cow): | 65, 0 |
| Conread position: | 298-527 |
| Cow position: | chr28:20759489-20759725 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 159 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 78, 144 |
| Conread position: | 298-527 |
| Cow position: | chr28:22332733-22332501 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 86, 16 |
| Conread position: | 298-528 |
| Cow position: | chr28:777880-777650 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 163 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 298-528 |
| Cow position: | chr28:5577736-5577501 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 55, 42 |
| Conread position: | 298-528 |
| Cow position: | chr28:11422615-11422838 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 298-528 |
| Cow position: | chr28:11585005-11585227 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 298-528 |
| Cow position: | chr28:12991339-12991111 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 168 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 180, 66 |
| Conread position: | 298-528 |
| Cow position: | chr28:30937479-30937692 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 298-529 |
| Cow position: | chr28:4089856-4090080 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 151, 11 |
| Conread position: | 298-529 |
| Cow position: | chr28:5204389-5204169 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 32, 0 |
| Conread position: | 298-529 |
| Cow position: | chr28:8787743-8787516 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 8.00001e-41 |
| Alignm gaps (pig, cow): | 93, 0 |
| Conread position: | 298-529 |
| Cow position: | chr28:16369885-16370109 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 298-530 |
| Cow position: | chr28:4643566-4643798 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 151 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 226, 64 |
| Conread position: | 298-530 |
| Cow position: | chr28:7008777-7009006 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 158 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 224, 65 |
| Conread position: | 298-530 |
| Cow position: | chr28:10588829-10589048 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-530 |
| Cow position: | chr28:11828755-11828983 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 167 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 84, 167 |
| Conread position: | 298-533 |
| Cow position: | chr28:11398590-11398829 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 299-472 |
| Cow position: | chr28:26867951-26868120 (view UCSC Genome Browser custom track) |
| Alignm length: | 174 |
| Alignm identity: | 122 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 299-495 |
| Cow position: | chr28:9109414-9109224 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 146 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 300-528 |
| Cow position: | chr28:25057158-25056941 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-32 |
| Alignm gaps (pig, cow): | 33, 0 |
| Conread position: | 300-537 |
| Cow position: | chr28:9740660-9740432 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 35, 60 |
| Conread position: | 302-511 |
| Cow position: | chr28:19038818-19039027 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 140 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 302-522 |
| Cow position: | chr28:19564035-19564247 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 302-522 |
| Cow position: | chr28:24082470-24082251 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 161 |
| Alignm E-value: | 6e-38 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 302-530 |
| Cow position: | chr28:13474499-13474275 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 165 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 46, 88 |
| Conread position: | 303-501 |
| Cow position: | chr28:28501440-28501235 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 71, 170 |
| Conread position: | 306-522 |
| Cow position: | chr28:4834647-4834863 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 97, 42 |
| Conread position: | 306-529 |
| Cow position: | chr28:25129080-25128861 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 98, 81 |
| Conread position: | 312-522 |
| Cow position: | chr28:26743821-26743607 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 144 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 312-527 |
| Cow position: | chr28:4046034-4045825 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 148 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 312-528 |
| Cow position: | chr28:26531091-26531300 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 64, 22 |
| Conread position: | 312-529 |
| Cow position: | chr28:17071530-17071311 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-21 |
| Alignm gaps (pig, cow): | 75, 99 |
| Conread position: | 313-514 |
| Cow position: | chr28:4364637-4364833 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 147 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 313-515 |
| Cow position: | chr28:5711822-5712013 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 143 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 314-519 |
| Cow position: | chr28:16879756-16879557 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 314-520 |
| Cow position: | chr28:12430795-12430588 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 55, 85 |
| Conread position: | 314-529 |
| Cow position: | chr28:16346350-16346557 (view UCSC Genome Browser custom track) |
| Alignm length: | 216 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 10, 0 |
| Conread position: | 318-511 |
| Cow position: | chr28:28810140-28809947 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 74, 91 |
| Conread position: | 318-528 |
| Cow position: | chr28:3741053-3740851 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 89, 45 |
| Conread position: | 350-528 |
| Cow position: | chr28:10775559-10775736 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 132 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 124, 39 |
| Conread position: | 365-521 |
| Cow position: | chr28:2131788-2131942 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 117 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 45, 23 |
| Conread position: | 375-528 |
| Cow position: | chr28:11752011-11752163 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 110 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 145, 0 |
| Conread position: | 375-529 |
| Cow position: | chr28:11816538-11816693 (view UCSC Genome Browser custom track) |
| Alignm length: | 157 |
| Alignm identity: | 115 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 29, 23 |
| Conread position: | 376-528 |
| Cow position: | chr28:4438838-4438686 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 112 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 30, 15 |
| Conread position: | 385-529 |
| Cow position: | chr28:16245947-16246090 (view UCSC Genome Browser custom track) |
| Alignm length: | 145 |
| Alignm identity: | 108 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 76, 0 |
Show alignments to all cow chromosomes.