Cow genome map
| Conread name: | Ss1.1-rnmm19c_k16.5 |
| Conread position: | 241-479 |
| Cow position: | chr9:8613441-8613201 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 169 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 12, 21 |
| Conread position: | 259-527 |
| Cow position: | chr9:37934449-37934178 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 37, 141 |
| Conread position: | 261-489 |
| Cow position: | chr9:5187069-5186847 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 158 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 114 |
| Conread position: | 267-479 |
| Cow position: | chr9:4263291-4263080 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 142 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 23, 117 |
| Conread position: | 267-487 |
| Cow position: | chr9:36401861-36401647 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 97, 0 |
| Conread position: | 269-527 |
| Cow position: | chr9:38792815-38793074 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 20, 143 |
| Conread position: | 272-487 |
| Cow position: | chr9:31344803-31344589 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 148 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 114, 10 |
| Conread position: | 272-506 |
| Cow position: | chr9:6189560-6189328 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 10, 88 |
| Conread position: | 273-476 |
| Cow position: | chr9:28452365-28452161 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 145 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 23, 78 |
| Conread position: | 273-493 |
| Cow position: | chr9:41470296-41470074 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 158 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 110, 148 |
| Conread position: | 274-473 |
| Cow position: | chr9:33101301-33101111 (view UCSC Genome Browser custom track) |
| Alignm length: | 202 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 26, 91 |
| Conread position: | 274-528 |
| Cow position: | chr9:12910594-12910342 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 274-528 |
| Cow position: | chr9:34286605-34286858 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 188 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 22, 0 |
| Conread position: | 276-511 |
| Cow position: | chr9:35832807-35832577 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 13, 54 |
| Conread position: | 277-524 |
| Cow position: | chr9:36453729-36453485 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 112, 0 |
| Conread position: | 278-527 |
| Cow position: | chr9:60395239-60394990 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 178 |
| Alignm E-value: | 4.99997e-41 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 280-527 |
| Cow position: | chr9:52519012-52518765 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 182 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 11, 86 |
| Conread position: | 281-476 |
| Cow position: | chr9:20815679-20815875 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 7, 23 |
| Conread position: | 281-521 |
| Cow position: | chr9:34410580-34410344 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 151, 81 |
| Conread position: | 281-528 |
| Cow position: | chr9:13744122-13743871 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 13, 143 |
| Conread position: | 281-529 |
| Cow position: | chr9:41728073-41728318 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 186 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 111, 0 |
| Conread position: | 281-531 |
| Cow position: | chr9:4241217-4241468 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 177 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 16, 96 |
| Conread position: | 281-536 |
| Cow position: | chr9:22466595-22466839 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 170 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 282-463 |
| Cow position: | chr9:64140749-64140565 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 107, 21 |
| Conread position: | 282-469 |
| Cow position: | chr9:61019550-61019362 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 130 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 129, 16 |
| Conread position: | 282-473 |
| Cow position: | chr9:34276398-34276206 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 141 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 100, 16 |
| Conread position: | 282-482 |
| Cow position: | chr9:28315240-28315442 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 82, 16 |
| Conread position: | 282-509 |
| Cow position: | chr9:42586734-42586516 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 158 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 82, 0 |
| Conread position: | 282-511 |
| Cow position: | chr9:58132137-58131911 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 22, 47 |
| Conread position: | 282-522 |
| Cow position: | chr9:52267946-52267705 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 44, 16 |
| Conread position: | 282-524 |
| Cow position: | chr9:28747704-28747465 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 182 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 107, 0 |
| Conread position: | 282-528 |
| Cow position: | chr9:41785034-41785269 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 17, 81 |
| Conread position: | 282-528 |
| Cow position: | chr9:45141783-45141541 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 184 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 17, 88 |
| Conread position: | 282-529 |
| Cow position: | chr9:8723606-8723853 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 29, 101 |
| Conread position: | 282-530 |
| Cow position: | chr9:40303320-40303073 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 172 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 196, 16 |
| Conread position: | 283-494 |
| Cow position: | chr9:19718519-19718315 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 158 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 283-513 |
| Cow position: | chr9:55256734-55256508 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 283-533 |
| Cow position: | chr9:52763940-52763696 (view UCSC Genome Browser custom track) |
| Alignm length: | 254 |
| Alignm identity: | 176 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 6, 48 |
| Conread position: | 284-520 |
| Cow position: | chr9:35028351-35028113 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 156 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 100, 136 |
| Conread position: | 284-524 |
| Cow position: | chr9:25804643-25804887 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 27, 138 |
| Conread position: | 284-529 |
| Cow position: | chr9:45285722-45285475 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 198 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 109, 14 |
| Conread position: | 285-463 |
| Cow position: | chr9:2037251-2037435 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 131 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 13, 0 |
| Conread position: | 285-471 |
| Cow position: | chr9:44918461-44918279 (view UCSC Genome Browser custom track) |
| Alignm length: | 188 |
| Alignm identity: | 135 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 52, 75 |
| Conread position: | 285-501 |
| Cow position: | chr9:37951082-37950866 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 83, 13 |
| Conread position: | 285-519 |
| Cow position: | chr9:59699735-59699497 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 173 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 79, 47 |
| Conread position: | 285-520 |
| Cow position: | chr9:34484408-34484646 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 161 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 79, 13 |
| Conread position: | 285-520 |
| Cow position: | chr9:44759109-44758881 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 139, 17 |
| Conread position: | 285-521 |
| Cow position: | chr9:39011650-39011417 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 285-523 |
| Cow position: | chr9:6397968-6397729 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 97, 13 |
| Conread position: | 285-526 |
| Cow position: | chr9:61302818-61303057 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 15, 97 |
| Conread position: | 285-527 |
| Cow position: | chr9:23956160-23955922 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-34 |
| Alignm gaps (pig, cow): | 100, 0 |
| Conread position: | 285-527 |
| Cow position: | chr9:25556800-25557030 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 169 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 109, 0 |
| Conread position: | 285-528 |
| Cow position: | chr9:19555204-19555432 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 171 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 8, 62 |
| Conread position: | 285-528 |
| Cow position: | chr9:35845201-35844953 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 139, 13 |
| Conread position: | 285-528 |
| Cow position: | chr9:53762516-53762754 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 169 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 193, 79 |
| Conread position: | 285-529 |
| Cow position: | chr9:23971076-23970836 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 163, 81 |
| Conread position: | 285-530 |
| Cow position: | chr9:36410533-36410297 (view UCSC Genome Browser custom track) |
| Alignm length: | 250 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 102, 120 |
| Conread position: | 285-531 |
| Cow position: | chr9:46981403-46981165 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 196, 13 |
| Conread position: | 285-531 |
| Cow position: | chr9:53109067-53109311 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 178 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 10, 89 |
| Conread position: | 286-451 |
| Cow position: | chr9:30194829-30194993 (view UCSC Genome Browser custom track) |
| Alignm length: | 167 |
| Alignm identity: | 121 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 111, 91 |
| Conread position: | 286-512 |
| Cow position: | chr9:11098634-11098413 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 161 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 18, 89 |
| Conread position: | 286-522 |
| Cow position: | chr9:13205743-13205519 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 85, 12 |
| Conread position: | 287-521 |
| Cow position: | chr9:43757364-43757593 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 178, 11 |
| Conread position: | 287-521 |
| Cow position: | chr9:59013519-59013290 (view UCSC Genome Browser custom track) |
| Alignm length: | 235 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 102, 0 |
| Conread position: | 287-524 |
| Cow position: | chr9:47517017-47517253 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 171 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 137, 11 |
| Conread position: | 288-474 |
| Cow position: | chr9:61301159-61300972 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 133 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 16, 103 |
| Conread position: | 288-513 |
| Cow position: | chr9:27345770-27345540 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 161 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 7, 117 |
| Conread position: | 288-527 |
| Cow position: | chr9:44396479-44396718 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 144, 126 |
| Conread position: | 290-487 |
| Cow position: | chr9:40984326-40984523 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 147 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 74, 96 |
| Conread position: | 290-495 |
| Cow position: | chr9:12773515-12773716 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 151 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 9, 99 |
| Conread position: | 290-498 |
| Cow position: | chr9:40603489-40603697 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 146 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 291-527 |
| Cow position: | chr9:12337723-12337960 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 167 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 73, 91 |
| Conread position: | 292-528 |
| Cow position: | chr9:13169841-13169604 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 85, 109 |
| Conread position: | 292-528 |
| Cow position: | chr9:28726908-28726665 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 169 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 21, 0 |
| Conread position: | 293-522 |
| Cow position: | chr9:57131324-57131548 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-38 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 294-468 |
| Cow position: | chr9:11447981-11447809 (view UCSC Genome Browser custom track) |
| Alignm length: | 176 |
| Alignm identity: | 128 |
| Alignm E-value: | 8e-25 |
| Alignm gaps (pig, cow): | 129, 103 |
| Conread position: | 295-476 |
| Cow position: | chr9:2397637-2397814 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 134, 67 |
| Conread position: | 295-526 |
| Cow position: | chr9:17840852-17840621 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 171 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 295-527 |
| Cow position: | chr9:8992352-8992121 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 100, 115 |
| Conread position: | 295-527 |
| Cow position: | chr9:11168572-11168788 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 38, 0 |
| Conread position: | 295-528 |
| Cow position: | chr9:9311686-9311917 (view UCSC Genome Browser custom track) |
| Alignm length: | 234 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 295-529 |
| Cow position: | chr9:9686591-9686355 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 59, 187 |
| Conread position: | 295-530 |
| Cow position: | chr9:26477039-26477278 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 69, 116 |
| Conread position: | 298-476 |
| Cow position: | chr9:61022449-61022630 (view UCSC Genome Browser custom track) |
| Alignm length: | 182 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 298-485 |
| Cow position: | chr9:19771190-19771378 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 138 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 26, 40 |
| Conread position: | 298-486 |
| Cow position: | chr9:32052106-32052293 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 136 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 51, 92 |
| Conread position: | 298-495 |
| Cow position: | chr9:12129138-12129333 (view UCSC Genome Browser custom track) |
| Alignm length: | 199 |
| Alignm identity: | 136 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 117, 109 |
| Conread position: | 298-500 |
| Cow position: | chr9:22447464-22447263 (view UCSC Genome Browser custom track) |
| Alignm length: | 203 |
| Alignm identity: | 136 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 27, 0 |
| Conread position: | 298-502 |
| Cow position: | chr9:51620274-51620475 (view UCSC Genome Browser custom track) |
| Alignm length: | 206 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 65, 84 |
| Conread position: | 298-510 |
| Cow position: | chr9:3924285-3924484 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 150 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 15, 74 |
| Conread position: | 298-511 |
| Cow position: | chr9:36457826-36458043 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 149 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 86, 111 |
| Conread position: | 298-516 |
| Cow position: | chr9:36627952-36628165 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 162 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 75, 0 |
| Conread position: | 298-522 |
| Cow position: | chr9:5327092-5327311 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 150 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 298-522 |
| Cow position: | chr9:15215860-15215634 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 151 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 86, 118 |
| Conread position: | 298-522 |
| Cow position: | chr9:21460323-21460101 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 72, 44 |
| Conread position: | 298-522 |
| Cow position: | chr9:22440643-22440429 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 298-522 |
| Cow position: | chr9:33584854-33584633 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 167 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 298-522 |
| Cow position: | chr9:34375097-34374872 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 160 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 84, 215 |
| Conread position: | 298-526 |
| Cow position: | chr9:37198957-37199184 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 4.00001e-40 |
| Alignm gaps (pig, cow): | 75, 93 |
| Conread position: | 298-526 |
| Cow position: | chr9:42508658-42508892 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 165 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 142, 91 |
| Conread position: | 298-527 |
| Cow position: | chr9:3378592-3378809 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 155 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 61, 0 |
| Conread position: | 298-527 |
| Cow position: | chr9:5263334-5263556 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 163 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 298-527 |
| Cow position: | chr9:19067599-19067840 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 178 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 66, 135 |
| Conread position: | 298-527 |
| Cow position: | chr9:26279343-26279112 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 169 |
| Alignm E-value: | 9e-37 |
| Alignm gaps (pig, cow): | 37, 220 |
| Conread position: | 298-527 |
| Cow position: | chr9:34024529-34024757 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 161 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 298-527 |
| Cow position: | chr9:63361881-63361661 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-528 |
| Cow position: | chr9:4341326-4341100 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 175 |
| Alignm E-value: | 7.00649e-44 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 298-528 |
| Cow position: | chr9:5104580-5104344 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 174 |
| Alignm E-value: | 3e-37 |
| Alignm gaps (pig, cow): | 64, 159 |
| Conread position: | 298-528 |
| Cow position: | chr9:8629082-8628859 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 298-528 |
| Cow position: | chr9:8636508-8636726 (view UCSC Genome Browser custom track) |
| Alignm length: | 231 |
| Alignm identity: | 162 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 298-528 |
| Cow position: | chr9:24887035-24887266 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 172 |
| Alignm E-value: | 5.99756e-43 |
| Alignm gaps (pig, cow): | 227, 0 |
| Conread position: | 298-529 |
| Cow position: | chr9:26345132-26344909 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 101, 0 |
| Conread position: | 298-529 |
| Cow position: | chr9:27279136-27279370 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 127 |
| Conread position: | 298-530 |
| Cow position: | chr9:9459819-9460047 (view UCSC Genome Browser custom track) |
| Alignm length: | 239 |
| Alignm identity: | 171 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 158, 64 |
| Conread position: | 298-530 |
| Cow position: | chr9:47214720-47214484 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 160 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 49, 0 |
| Conread position: | 298-538 |
| Cow position: | chr9:33151579-33151809 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 163 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 299-487 |
| Cow position: | chr9:55807465-55807649 (view UCSC Genome Browser custom track) |
| Alignm length: | 189 |
| Alignm identity: | 132 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 74, 0 |
| Conread position: | 299-522 |
| Cow position: | chr9:5342415-5342195 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 152 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 299-524 |
| Cow position: | chr9:61738751-61738977 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 10, 163 |
| Conread position: | 299-530 |
| Cow position: | chr9:17872276-17872048 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 166 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 225, 74 |
| Conread position: | 300-471 |
| Cow position: | chr9:45740312-45740140 (view UCSC Genome Browser custom track) |
| Alignm length: | 173 |
| Alignm identity: | 120 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 91, 0 |
| Conread position: | 300-476 |
| Cow position: | chr9:34423450-34423629 (view UCSC Genome Browser custom track) |
| Alignm length: | 181 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 84, 109 |
| Conread position: | 301-494 |
| Cow position: | chr9:26394515-26394325 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 146 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 89, 0 |
| Conread position: | 301-520 |
| Cow position: | chr9:42061926-42062152 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 154 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 48, 123 |
| Conread position: | 302-479 |
| Cow position: | chr9:48901001-48900826 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 127 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 28 |
| Conread position: | 302-493 |
| Cow position: | chr9:24079139-24079326 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 302-521 |
| Cow position: | chr9:41282846-41283067 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 149 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 84, 0 |
| Conread position: | 302-522 |
| Cow position: | chr9:7806120-7805908 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 155 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 63, 0 |
| Conread position: | 302-527 |
| Cow position: | chr9:48627857-48628086 (view UCSC Genome Browser custom track) |
| Alignm length: | 232 |
| Alignm identity: | 164 |
| Alignm E-value: | 1e-29 |
| Alignm gaps (pig, cow): | 50, 93 |
| Conread position: | 302-530 |
| Cow position: | chr9:43159589-43159813 (view UCSC Genome Browser custom track) |
| Alignm length: | 230 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 181, 27 |
| Conread position: | 302-541 |
| Cow position: | chr9:9596116-9595878 (view UCSC Genome Browser custom track) |
| Alignm length: | 242 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 166, 72 |
| Conread position: | 303-499 |
| Cow position: | chr9:34707475-34707282 (view UCSC Genome Browser custom track) |
| Alignm length: | 197 |
| Alignm identity: | 143 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 81, 0 |
| Conread position: | 303-522 |
| Cow position: | chr9:49402483-49402703 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 158 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 58, 157 |
| Conread position: | 303-528 |
| Cow position: | chr9:33822952-33823177 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 159 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 101, 24 |
| Conread position: | 303-529 |
| Cow position: | chr9:18380703-18380921 (view UCSC Genome Browser custom track) |
| Alignm length: | 227 |
| Alignm identity: | 165 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 78, 0 |
| Conread position: | 306-511 |
| Cow position: | chr9:22165879-22165671 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 150 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 76, 0 |
| Conread position: | 306-517 |
| Cow position: | chr9:34958214-34958008 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 77, 0 |
| Conread position: | 306-522 |
| Cow position: | chr9:33219119-33218902 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 156 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 68, 136 |
| Conread position: | 307-530 |
| Cow position: | chr9:22443784-22443566 (view UCSC Genome Browser custom track) |
| Alignm length: | 224 |
| Alignm identity: | 148 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 67, 0 |
| Conread position: | 308-522 |
| Cow position: | chr9:38846501-38846284 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 152 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 66, 163 |
| Conread position: | 311-527 |
| Cow position: | chr9:54492981-54493193 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 145 |
| Alignm E-value: | 6e-22 |
| Alignm gaps (pig, cow): | 48, 0 |
| Conread position: | 312-489 |
| Cow position: | chr9:1712864-1712686 (view UCSC Genome Browser custom track) |
| Alignm length: | 180 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 52, 87 |
| Conread position: | 312-511 |
| Cow position: | chr9:21292563-21292365 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 167, 78 |
| Conread position: | 312-522 |
| Cow position: | chr9:29195188-29194971 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 162 |
| Alignm E-value: | 8e-36 |
| Alignm gaps (pig, cow): | 66, 0 |
| Conread position: | 312-530 |
| Cow position: | chr9:64105747-64105960 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 154 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 148, 77 |
| Conread position: | 314-521 |
| Cow position: | chr9:29006405-29006609 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-35 |
| Alignm gaps (pig, cow): | 83, 0 |
| Conread position: | 318-511 |
| Cow position: | chr9:20637225-20637415 (view UCSC Genome Browser custom track) |
| Alignm length: | 194 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 320-522 |
| Cow position: | chr9:24652251-24652457 (view UCSC Genome Browser custom track) |
| Alignm length: | 207 |
| Alignm identity: | 139 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 323-520 |
| Cow position: | chr9:33120036-33119837 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 144 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 59, 0 |
| Conread position: | 326-502 |
| Cow position: | chr9:43202193-43202367 (view UCSC Genome Browser custom track) |
| Alignm length: | 177 |
| Alignm identity: | 127 |
| Alignm E-value: | 9e-26 |
| Alignm gaps (pig, cow): | 64, 0 |
| Conread position: | 343-527 |
| Cow position: | chr9:49545490-49545310 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 128 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 131, 0 |
| Conread position: | 357-528 |
| Cow position: | chr9:4268094-4267923 (view UCSC Genome Browser custom track) |
| Alignm length: | 172 |
| Alignm identity: | 128 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 365-520 |
| Cow position: | chr9:6293492-6293646 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 118 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 365-522 |
| Cow position: | chr9:8562720-8562873 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 121 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 365-528 |
| Cow position: | chr9:39758416-39758577 (view UCSC Genome Browser custom track) |
| Alignm length: | 164 |
| Alignm identity: | 116 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 25, 0 |
| Conread position: | 366-517 |
| Cow position: | chr9:55354506-55354659 (view UCSC Genome Browser custom track) |
| Alignm length: | 154 |
| Alignm identity: | 118 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 20, 0 |
| Conread position: | 366-527 |
| Cow position: | chr9:31079180-31079024 (view UCSC Genome Browser custom track) |
| Alignm length: | 162 |
| Alignm identity: | 118 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 385-520 |
| Cow position: | chr9:5219256-5219119 (view UCSC Genome Browser custom track) |
| Alignm length: | 139 |
| Alignm identity: | 107 |
| Alignm E-value: | 6e-23 |
| Alignm gaps (pig, cow): | 22, 14 |
Show alignments to all cow chromosomes.