Cow genome map


           Conread name:
           Ss1.1-rnmm34c_b15.5
        

               Conread position:
               1-336
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               243
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               8, 221
               

               Conread position:
               2-437
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               281
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               11, 78
               

               Conread position:
               7-356
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               241
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               26, 114
               

               Conread position:
               8-360
               

               Cow position:
               
               

               Alignm length:
               363
               

               Alignm identity:
               246
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               72, 31
               

               Conread position:
               8-388
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               264
               

               Alignm E-value:
               9.00054e-42
               

               Alignm gaps (pig, cow):
               39, 287
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               259
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               157, 70
               

               Conread position:
               8-418
               

               Cow position:
               
               

               Alignm length:
               431
               

               Alignm identity:
               270
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 286
               

               Conread position:
               8-465
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               286
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               96, 49
               

               Conread position:
               9-417
               

               Cow position:
               
               

               Alignm length:
               423
               

               Alignm identity:
               281
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               77, 69
               

               Conread position:
               11-445
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               7, 78
               

               Conread position:
               11-483
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               311
               

               Alignm E-value:
               3.00018e-42
               

               Alignm gaps (pig, cow):
               8, 342
               

               Conread position:
               13-334
               

               Cow position:
               
               

               Alignm length:
               333
               

               Alignm identity:
               217
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               81, 155
               

               Conread position:
               13-448
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               300
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               147, 65
               

               Conread position:
               13-457
               

               Cow position:
               
               

               Alignm length:
               455
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               75, 29
               

               Conread position:
               15-356
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               252
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               60, 42
               

               Conread position:
               24-389
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               244
               

               Alignm E-value:
               6e-37
               

               Alignm gaps (pig, cow):
               59, 118
               

               Conread position:
               49-309
               

               Cow position:
               
               

               Alignm length:
               265
               

               Alignm identity:
               175
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               8, 31
               

               Conread position:
               79-322
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               170
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               86, 52
               

               Conread position:
               82-366
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               197
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               62, 29
               

               Conread position:
               83-477
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               76, 21
               

               Conread position:
               90-356
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               77, 23
               

               Conread position:
               106-348
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               24, 144
               

               Conread position:
               115-373
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               181
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               43, 170
               

               Conread position:
               121-338
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               149
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               37, 88
               

               Conread position:
               121-357
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               161
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               48, 63
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               53, 83
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               184
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               38, 106
               

               Conread position:
               121-445
               

               Cow position:
               
               

               Alignm length:
               335
               

               Alignm identity:
               231
               

               Alignm E-value:
               6e-38
               

               Alignm gaps (pig, cow):
               38, 85
               

               Conread position:
               124-389
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               196
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               41, 170
               

               Conread position:
               125-387
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               136-389
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               176
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               160, 40
               

               Conread position:
               137-327
               

               Cow position:
               
               

               Alignm length:
               194
               

               Alignm identity:
               134
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               31, 0
               

               Conread position:
               138-389
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               185
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               142-389
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               173
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               21, 64
               

               Conread position:
               146-360
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               20, 134
               

               Conread position:
               167-448
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               101, 105
               

               Conread position:
               171-357
               

               Cow position:
               
               

               Alignm length:
               187
               

               Alignm identity:
               133
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               136, 0
               

               Conread position:
               172-389
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               183-417
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               144, 79
               

               Conread position:
               186-389
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               141
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               189, 134
               

               Conread position:
               187-448
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               201, 132
               

               Conread position:
               199-455
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               174
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               190, 13
               
Show alignments to all cow chromosomes.