Cow genome map


           Conread name:
           Ss1.1-rnmm34c_b15.5
        

               Conread position:
               1-296
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               193
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               171, 8
               

               Conread position:
               1-389
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               269
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               13, 193
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               242
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               150, 76
               

               Conread position:
               8-419
               

               Cow position:
               
               

               Alignm length:
               425
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               77, 82
               

               Conread position:
               9-389
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               246
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               15, 91
               

               Conread position:
               13-356
               

               Cow position:
               
               

               Alignm length:
               351
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               27, 11
               

               Conread position:
               13-389
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               244
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               39, 67
               

               Conread position:
               14-356
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               249
               

               Alignm E-value:
               9.99967e-42
               

               Alignm gaps (pig, cow):
               63, 252
               

               Conread position:
               18-356
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               235
               

               Alignm E-value:
               3e-29
               

               Alignm gaps (pig, cow):
               60, 68
               

               Conread position:
               23-389
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               42, 14
               

               Conread position:
               28-388
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               72, 156
               

               Conread position:
               31-389
               

               Cow position:
               
               

               Alignm length:
               367
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               55, 38
               

               Conread position:
               47-423
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               249
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               34, 41
               

               Conread position:
               68-371
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               207
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               99, 43
               

               Conread position:
               77-397
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               227
               

               Alignm E-value:
               3.9937e-43
               

               Alignm gaps (pig, cow):
               86, 40
               

               Conread position:
               79-445
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               242
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               89, 33
               

               Conread position:
               82-474
               

               Cow position:
               
               

               Alignm length:
               410
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               84, 29
               

               Conread position:
               89-347
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               176
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               22, 119
               

               Conread position:
               100-442
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               225
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               56, 15
               

               Conread position:
               106-360
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               185
               

               Alignm E-value:
               5e-34
               

               Alignm gaps (pig, cow):
               54, 8
               

               Conread position:
               106-465
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               57, 8
               

               Conread position:
               114-422
               

               Cow position:
               
               

               Alignm length:
               320
               

               Alignm identity:
               209
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               37, 22
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               185
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 122
               

               Conread position:
               121-390
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               187
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               37, 162
               

               Conread position:
               122-341
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               150
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               36, 0
               

               Conread position:
               123-382
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               183
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               35, 155
               

               Conread position:
               124-385
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               174
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               35, 204
               

               Conread position:
               126-486
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               37, 109
               

               Conread position:
               137-367
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               28, 0
               

               Conread position:
               138-367
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               153
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               138-391
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               30, 55
               

               Conread position:
               138-391
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               167
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               28, 232
               

               Conread position:
               150-389
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               179
               

               Alignm E-value:
               3e-38
               

               Alignm gaps (pig, cow):
               13, 215
               

               Conread position:
               157-422
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               9, 92
               

               Conread position:
               165-417
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               174
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               223, 112
               

               Conread position:
               166-357
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               88, 0
               

               Conread position:
               166-382
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 188
               

               Conread position:
               167-356
               

               Cow position:
               
               

               Alignm length:
               190
               

               Alignm identity:
               130
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               167-372
               

               Cow position:
               
               

               Alignm length:
               208
               

               Alignm identity:
               139
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               61, 0
               

               Conread position:
               167-381
               

               Cow position:
               
               

               Alignm length:
               215
               

               Alignm identity:
               148
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               81, 0
               

               Conread position:
               171-349
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               122
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-383
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               150
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               24, 61
               

               Conread position:
               171-408
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               158
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               43, 188
               

               Conread position:
               173-349
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               126
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               20, 0
               

               Conread position:
               173-483
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               203
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               61, 73
               

               Conread position:
               180-356
               

               Cow position:
               
               

               Alignm length:
               177
               

               Alignm identity:
               124
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               110, 0
               

               Conread position:
               186-419
               

               Cow position:
               
               

               Alignm length:
               235
               

               Alignm identity:
               164
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               194, 9
               

               Conread position:
               189-360
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               123
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               13, 0
               

               Conread position:
               189-388
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               146
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               100, 89
               

               Conread position:
               207-360
               

               Cow position:
               
               

               Alignm length:
               154
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               207-388
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               128
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               78, 71
               
Show alignments to all cow chromosomes.