Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 1-389 |
| Cow position: | chr12:28125051-28124659 (view UCSC Genome Browser custom track) |
| Alignm length: | 397 |
| Alignm identity: | 242 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 105, 82 |
| Conread position: | 9-311 |
| Cow position: | chr12:32120798-32120496 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 203 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 65, 85 |
| Conread position: | 13-383 |
| Cow position: | chr12:40139899-40139522 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 249 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 82, 65 |
| Conread position: | 18-453 |
| Cow position: | chr12:1239297-1238862 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 283 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 140, 82 |
| Conread position: | 83-383 |
| Cow position: | chr12:46054766-46054463 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 75, 33 |
| Conread position: | 87-359 |
| Cow position: | chr12:18584536-18584261 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 185 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 80, 24 |
| Conread position: | 115-417 |
| Cow position: | chr12:22134140-22133839 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 196 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 43, 162 |
| Conread position: | 121-381 |
| Cow position: | chr12:45120966-45121226 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 180 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 37, 44 |
| Conread position: | 121-389 |
| Cow position: | chr12:4831228-4831501 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 178 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 53, 244 |
| Conread position: | 125-389 |
| Cow position: | chr12:37087713-37087981 (view UCSC Genome Browser custom track) |
| Alignm length: | 272 |
| Alignm identity: | 182 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 43, 138 |
| Conread position: | 171-339 |
| Cow position: | chr12:11887146-11887313 (view UCSC Genome Browser custom track) |
| Alignm length: | 169 |
| Alignm identity: | 130 |
| Alignm E-value: | 3e-33 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 171-445 |
| Cow position: | chr12:8829012-8829272 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 187 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 190, 31 |
| Conread position: | 172-389 |
| Cow position: | chr12:32237570-32237355 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 203, 106 |
| Conread position: | 182-360 |
| Cow position: | chr12:11689497-11689321 (view UCSC Genome Browser custom track) |
| Alignm length: | 179 |
| Alignm identity: | 128 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 16, 0 |
Show alignments to all cow chromosomes.