Cow genome map


           Conread name:
           Ss1.1-rnmm34c_b15.5
        

               Conread position:
               3-389
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               257
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               11, 30
               

               Conread position:
               7-360
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               63, 34
               

               Conread position:
               8-291
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 28
               

               Conread position:
               8-335
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               223
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               37, 50
               

               Conread position:
               8-342
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               221
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               56, 71
               

               Conread position:
               8-343
               

               Cow position:
               
               

               Alignm length:
               345
               

               Alignm identity:
               218
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               114, 75
               

               Conread position:
               8-388
               

               Cow position:
               
               

               Alignm length:
               401
               

               Alignm identity:
               254
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               70, 113
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               405
               

               Alignm identity:
               260
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               70, 120
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               264
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               70, 117
               

               Conread position:
               8-413
               

               Cow position:
               
               

               Alignm length:
               419
               

               Alignm identity:
               281
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               30, 81
               

               Conread position:
               13-356
               

               Cow position:
               
               

               Alignm length:
               360
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               65, 138
               

               Conread position:
               13-471
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               281
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               40, 98
               

               Conread position:
               19-393
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               247
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               52, 25
               

               Conread position:
               24-383
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               235
               

               Alignm E-value:
               8e-31
               

               Alignm gaps (pig, cow):
               51, 90
               

               Conread position:
               30-360
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               48, 126
               

               Conread position:
               76-314
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               170
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               87, 65
               

               Conread position:
               79-317
               

               Cow position:
               
               

               Alignm length:
               249
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               88, 24
               

               Conread position:
               79-389
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               222
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               26, 15
               

               Conread position:
               83-437
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               242
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               76, 38
               

               Conread position:
               89-356
               

               Cow position:
               
               

               Alignm length:
               277
               

               Alignm identity:
               186
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               79, 129
               

               Conread position:
               121-356
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               37, 162
               

               Conread position:
               121-367
               

               Cow position:
               
               

               Alignm length:
               253
               

               Alignm identity:
               171
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               44, 81
               

               Conread position:
               121-368
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               170
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               34, 85
               

               Conread position:
               121-384
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               179
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 12
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               181
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               38, 166
               

               Conread position:
               122-389
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               43, 87
               

               Conread position:
               124-356
               

               Cow position:
               
               

               Alignm length:
               244
               

               Alignm identity:
               165
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               40, 61
               

               Conread position:
               124-360
               

               Cow position:
               
               

               Alignm length:
               240
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               131, 42
               

               Conread position:
               146-398
               

               Cow position:
               
               

               Alignm length:
               255
               

               Alignm identity:
               167
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               20, 30
               

               Conread position:
               157-413
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               167
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               9, 38
               

               Conread position:
               158-445
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               192
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               217, 77
               

               Conread position:
               165-356
               

               Cow position:
               
               

               Alignm length:
               192
               

               Alignm identity:
               131
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               133, 0
               

               Conread position:
               165-381
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               145
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               210, 130
               

               Conread position:
               171-343
               

               Cow position:
               
               

               Alignm length:
               175
               

               Alignm identity:
               123
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               166, 9
               

               Conread position:
               171-382
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               183, 41
               

               Conread position:
               171-389
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               158
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               37, 83
               

               Conread position:
               171-418
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               168
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               220, 25
               

               Conread position:
               172-380
               

               Cow position:
               
               

               Alignm length:
               210
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               206, 0
               

               Conread position:
               175-389
               

               Cow position:
               
               

               Alignm length:
               217
               

               Alignm identity:
               153
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               47, 12
               

               Conread position:
               180-360
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               128
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               21, 0
               

               Conread position:
               186-356
               

               Cow position:
               
               

               Alignm length:
               172
               

               Alignm identity:
               122
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               104, 94
               

               Conread position:
               187-389
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               138
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               188, 177
               

               Conread position:
               228-417
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               138
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               17, 0
               
Show alignments to all cow chromosomes.