Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 1-389 |
| Cow position: | chr14:33281349-33280942 (view UCSC Genome Browser custom track) |
| Alignm length: | 408 |
| Alignm identity: | 264 |
| Alignm E-value: | 3e-34 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 8-368 |
| Cow position: | chr14:42917191-42917565 (view UCSC Genome Browser custom track) |
| Alignm length: | 378 |
| Alignm identity: | 249 |
| Alignm E-value: | 9e-34 |
| Alignm gaps (pig, cow): | 65, 114 |
| Conread position: | 8-389 |
| Cow position: | chr14:20468518-20468894 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 145, 69 |
| Conread position: | 13-389 |
| Cow position: | chr14:31471942-31472328 (view UCSC Genome Browser custom track) |
| Alignm length: | 393 |
| Alignm identity: | 246 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 61, 109 |
| Conread position: | 19-389 |
| Cow position: | chr14:27822849-27822475 (view UCSC Genome Browser custom track) |
| Alignm length: | 386 |
| Alignm identity: | 256 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 93, 27 |
| Conread position: | 29-356 |
| Cow position: | chr14:22900096-22899766 (view UCSC Genome Browser custom track) |
| Alignm length: | 336 |
| Alignm identity: | 217 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 40, 51 |
| Conread position: | 79-344 |
| Cow position: | chr14:26815206-26815462 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 179 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 34, 0 |
| Conread position: | 79-389 |
| Cow position: | chr14:31946693-31946379 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 90 |
| Conread position: | 114-445 |
| Cow position: | chr14:1877850-1878182 (view UCSC Genome Browser custom track) |
| Alignm length: | 344 |
| Alignm identity: | 224 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 47, 23 |
| Conread position: | 115-356 |
| Cow position: | chr14:24966316-24966075 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 169 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 50, 167 |
| Conread position: | 120-423 |
| Cow position: | chr14:46116099-46116389 (view UCSC Genome Browser custom track) |
| Alignm length: | 308 |
| Alignm identity: | 205 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 43, 91 |
| Conread position: | 121-356 |
| Cow position: | chr14:39341127-39341368 (view UCSC Genome Browser custom track) |
| Alignm length: | 243 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 43, 159 |
| Conread position: | 121-388 |
| Cow position: | chr14:13823861-13823601 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 135, 42 |
| Conread position: | 140-389 |
| Cow position: | chr14:35088546-35088302 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 8, 17 |
| Conread position: | 171-356 |
| Cow position: | chr14:12801793-12801608 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 130 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 171-360 |
| Cow position: | chr14:14114694-14114882 (view UCSC Genome Browser custom track) |
| Alignm length: | 190 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 137, 0 |
| Conread position: | 171-389 |
| Cow position: | chr14:17767047-17766830 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 103, 111 |
| Conread position: | 171-448 |
| Cow position: | chr14:23465320-23465590 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 185 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 225, 117 |
| Conread position: | 172-357 |
| Cow position: | chr14:18531432-18531617 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 131 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 180, 116 |
| Conread position: | 172-367 |
| Cow position: | chr14:38739763-38739570 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 137 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 66, 107 |
| Conread position: | 178-362 |
| Cow position: | chr14:40253036-40252852 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 125 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 180-335 |
| Cow position: | chr14:20104537-20104386 (view UCSC Genome Browser custom track) |
| Alignm length: | 156 |
| Alignm identity: | 113 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 180-351 |
| Cow position: | chr14:31987009-31987182 (view UCSC Genome Browser custom track) |
| Alignm length: | 175 |
| Alignm identity: | 125 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 48, 130 |
| Conread position: | 180-478 |
| Cow position: | chr14:43567674-43567960 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 196, 0 |
| Conread position: | 181-372 |
| Cow position: | chr14:40058700-40058892 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 137 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 10, 113 |
| Conread position: | 207-417 |
| Cow position: | chr14:13836949-13837166 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 153 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 168, 117 |
Show alignments to all cow chromosomes.