Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 8-342 |
| Cow position: | chr15:34364256-34363899 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 73, 0 |
| Conread position: | 8-388 |
| Cow position: | chr15:5638601-5638209 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 264 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 79, 28 |
| Conread position: | 12-445 |
| Cow position: | chr15:24639231-24639674 (view UCSC Genome Browser custom track) |
| Alignm length: | 450 |
| Alignm identity: | 282 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 68, 299 |
| Conread position: | 13-299 |
| Cow position: | chr15:47189003-47188690 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 214 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 65, 212 |
| Conread position: | 13-378 |
| Cow position: | chr15:9390354-9390721 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 152, 65 |
| Conread position: | 13-389 |
| Cow position: | chr15:13135346-13134977 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 238 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 276, 22 |
| Conread position: | 18-360 |
| Cow position: | chr15:35395504-35395165 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 229 |
| Alignm E-value: | 4e-27 |
| Alignm gaps (pig, cow): | 82, 65 |
| Conread position: | 19-383 |
| Cow position: | chr15:26881242-26880854 (view UCSC Genome Browser custom track) |
| Alignm length: | 390 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 58, 221 |
| Conread position: | 79-351 |
| Cow position: | chr15:33655315-33655046 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 183 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 26, 43 |
| Conread position: | 79-389 |
| Cow position: | chr15:11684654-11684968 (view UCSC Genome Browser custom track) |
| Alignm length: | 321 |
| Alignm identity: | 209 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 23, 52 |
| Conread position: | 79-389 |
| Cow position: | chr15:26933325-26933639 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 19, 39 |
| Conread position: | 79-466 |
| Cow position: | chr15:43640531-43640927 (view UCSC Genome Browser custom track) |
| Alignm length: | 407 |
| Alignm identity: | 261 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 79, 32 |
| Conread position: | 82-387 |
| Cow position: | chr15:14411429-14411738 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 204 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 76, 33 |
| Conread position: | 82-389 |
| Cow position: | chr15:5913307-5912997 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 202 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 81, 30 |
| Conread position: | 108-389 |
| Cow position: | chr15:27758653-27758375 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 175, 24 |
| Conread position: | 115-355 |
| Cow position: | chr15:36298729-36298483 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 39, 0 |
| Conread position: | 115-424 |
| Cow position: | chr15:9046226-9046545 (view UCSC Genome Browser custom track) |
| Alignm length: | 322 |
| Alignm identity: | 214 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 23, 53 |
| Conread position: | 121-356 |
| Cow position: | chr15:32976698-32976460 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 157 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 42, 152 |
| Conread position: | 121-363 |
| Cow position: | chr15:23271276-23271037 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 172 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 45, 155 |
| Conread position: | 122-388 |
| Cow position: | chr15:14719358-14719623 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 185 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 123-465 |
| Cow position: | chr15:9660848-9660506 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 232 |
| Alignm E-value: | 6e-30 |
| Alignm gaps (pig, cow): | 35, 75 |
| Conread position: | 142-389 |
| Cow position: | chr15:7290624-7290865 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 162 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 160-460 |
| Cow position: | chr15:50321304-50321001 (view UCSC Genome Browser custom track) |
| Alignm length: | 307 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-33 |
| Alignm gaps (pig, cow): | 85, 160 |
| Conread position: | 165-389 |
| Cow position: | chr15:9038540-9038317 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 126, 0 |
| Conread position: | 165-442 |
| Cow position: | chr15:44460385-44460657 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 194 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 178, 54 |
| Conread position: | 171-389 |
| Cow position: | chr15:9368989-9369207 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 143 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 171-389 |
| Cow position: | chr15:22619674-22619888 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 150 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 142, 95 |
| Conread position: | 171-389 |
| Cow position: | chr15:25660854-25660636 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 154 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 114, 107 |
| Conread position: | 172-406 |
| Cow position: | chr15:11612529-11612759 (view UCSC Genome Browser custom track) |
| Alignm length: | 236 |
| Alignm identity: | 155 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 227, 29 |
| Conread position: | 174-388 |
| Cow position: | chr15:35716070-35715859 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 34, 26 |
| Conread position: | 180-392 |
| Cow position: | chr15:23785282-23785070 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 138 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 183-389 |
| Cow position: | chr15:7311607-7311811 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 106, 75 |
| Conread position: | 188-442 |
| Cow position: | chr15:30800445-30800707 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-35 |
| Alignm gaps (pig, cow): | 201, 0 |
Show alignments to all cow chromosomes.