Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 7-317 |
| Cow position: | chr16:22843514-22843833 (view UCSC Genome Browser custom track) |
| Alignm length: | 324 |
| Alignm identity: | 218 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 88, 153 |
| Conread position: | 7-385 |
| Cow position: | chr16:18091759-18091383 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 237 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 132, 67 |
| Conread position: | 8-317 |
| Cow position: | chr16:51381742-51381416 (view UCSC Genome Browser custom track) |
| Alignm length: | 330 |
| Alignm identity: | 224 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 69, 117 |
| Conread position: | 8-321 |
| Cow position: | chr16:20124734-20125058 (view UCSC Genome Browser custom track) |
| Alignm length: | 328 |
| Alignm identity: | 214 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 69, 99 |
| Conread position: | 8-389 |
| Cow position: | chr16:50517294-50517674 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 250 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 86, 95 |
| Conread position: | 8-389 |
| Cow position: | chr16:52391077-52391476 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 255 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 27, 291 |
| Conread position: | 11-418 |
| Cow position: | chr16:13100475-13100890 (view UCSC Genome Browser custom track) |
| Alignm length: | 426 |
| Alignm identity: | 271 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 25, 119 |
| Conread position: | 13-359 |
| Cow position: | chr16:33196703-33197052 (view UCSC Genome Browser custom track) |
| Alignm length: | 352 |
| Alignm identity: | 223 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 79, 155 |
| Conread position: | 23-389 |
| Cow position: | chr16:15045832-15045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 384 |
| Alignm identity: | 242 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 54, 42 |
| Conread position: | 28-356 |
| Cow position: | chr16:54704394-54704714 (view UCSC Genome Browser custom track) |
| Alignm length: | 339 |
| Alignm identity: | 223 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 43, 16 |
| Conread position: | 28-448 |
| Cow position: | chr16:15308878-15309306 (view UCSC Genome Browser custom track) |
| Alignm length: | 445 |
| Alignm identity: | 304 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 50, 75 |
| Conread position: | 29-389 |
| Cow position: | chr16:20722026-20722386 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 232 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 130, 49 |
| Conread position: | 84-386 |
| Cow position: | chr16:16010739-16010438 (view UCSC Genome Browser custom track) |
| Alignm length: | 309 |
| Alignm identity: | 197 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 81, 14 |
| Conread position: | 87-385 |
| Cow position: | chr16:13601678-13601375 (view UCSC Genome Browser custom track) |
| Alignm length: | 306 |
| Alignm identity: | 193 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 26, 30 |
| Conread position: | 121-310 |
| Cow position: | chr16:11018916-11018726 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 132 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 44, 121 |
| Conread position: | 121-353 |
| Cow position: | chr16:30074334-30074568 (view UCSC Genome Browser custom track) |
| Alignm length: | 237 |
| Alignm identity: | 163 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 46, 191 |
| Conread position: | 121-376 |
| Cow position: | chr16:17422236-17421977 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 182 |
| Alignm E-value: | 1e-37 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 121-448 |
| Cow position: | chr16:46527940-46527610 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 223 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 113, 153 |
| Conread position: | 121-477 |
| Cow position: | chr16:25595634-25595275 (view UCSC Genome Browser custom track) |
| Alignm length: | 365 |
| Alignm identity: | 231 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 161 |
| Conread position: | 123-345 |
| Cow position: | chr16:7384112-7383887 (view UCSC Genome Browser custom track) |
| Alignm length: | 228 |
| Alignm identity: | 155 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 40, 210 |
| Conread position: | 123-382 |
| Cow position: | chr16:14745292-14745029 (view UCSC Genome Browser custom track) |
| Alignm length: | 265 |
| Alignm identity: | 170 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 40, 155 |
| Conread position: | 125-383 |
| Cow position: | chr16:45235948-45236208 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 186 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 34, 71 |
| Conread position: | 144-385 |
| Cow position: | chr16:26682598-26682841 (view UCSC Genome Browser custom track) |
| Alignm length: | 246 |
| Alignm identity: | 167 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 21, 79 |
| Conread position: | 150-441 |
| Cow position: | chr16:29979414-29979128 (view UCSC Genome Browser custom track) |
| Alignm length: | 296 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 8, 66 |
| Conread position: | 157-389 |
| Cow position: | chr16:19041660-19041895 (view UCSC Genome Browser custom track) |
| Alignm length: | 238 |
| Alignm identity: | 161 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 9, 41 |
| Conread position: | 167-385 |
| Cow position: | chr16:42840231-42840010 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 148 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 17, 0 |
| Conread position: | 168-423 |
| Cow position: | chr16:52472719-52472461 (view UCSC Genome Browser custom track) |
| Alignm length: | 262 |
| Alignm identity: | 171 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 122, 39 |
| Conread position: | 171-382 |
| Cow position: | chr16:20358444-20358655 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 141 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 185, 192 |
| Conread position: | 171-389 |
| Cow position: | chr16:30582342-30582122 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 153 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 52, 115 |
| Conread position: | 173-383 |
| Cow position: | chr16:52146946-52146735 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 144 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 106, 24 |
| Conread position: | 173-388 |
| Cow position: | chr16:27589479-27589265 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 146 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 109, 82 |
| Conread position: | 173-389 |
| Cow position: | chr16:15667427-15667647 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 54, 0 |
| Conread position: | 173-391 |
| Cow position: | chr16:13030157-13029941 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 157 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 117, 91 |
Show alignments to all cow chromosomes.