Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 8-268 |
| Cow position: | chr19:52147786-52147525 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 78, 70 |
| Conread position: | 8-309 |
| Cow position: | chr19:14627387-14627665 (view UCSC Genome Browser custom track) |
| Alignm length: | 302 |
| Alignm identity: | 207 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 70, 0 |
| Conread position: | 11-356 |
| Cow position: | chr19:17981535-17981886 (view UCSC Genome Browser custom track) |
| Alignm length: | 358 |
| Alignm identity: | 233 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 58, 117 |
| Conread position: | 11-389 |
| Cow position: | chr19:39884422-39884025 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 254 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 55, 118 |
| Conread position: | 13-359 |
| Cow position: | chr19:38735449-38735816 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 242 |
| Alignm E-value: | 9e-33 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 14-382 |
| Cow position: | chr19:9115069-9114691 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 241 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 64, 86 |
| Conread position: | 14-435 |
| Cow position: | chr19:19444961-19444525 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 296 |
| Alignm E-value: | 3.00018e-42 |
| Alignm gaps (pig, cow): | 81, 64 |
| Conread position: | 18-419 |
| Cow position: | chr19:17804538-17804955 (view UCSC Genome Browser custom track) |
| Alignm length: | 422 |
| Alignm identity: | 267 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 94, 71 |
| Conread position: | 19-392 |
| Cow position: | chr19:13066340-13066725 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 68, 60 |
| Conread position: | 22-389 |
| Cow position: | chr19:48402681-48402314 (view UCSC Genome Browser custom track) |
| Alignm length: | 374 |
| Alignm identity: | 230 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 56, 94 |
| Conread position: | 23-382 |
| Cow position: | chr19:17690488-17690856 (view UCSC Genome Browser custom track) |
| Alignm length: | 373 |
| Alignm identity: | 244 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 57, 101 |
| Conread position: | 44-350 |
| Cow position: | chr19:18393770-18393452 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 213 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 60, 216 |
| Conread position: | 46-303 |
| Cow position: | chr19:6979035-6978777 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 66, 37 |
| Conread position: | 79-444 |
| Cow position: | chr19:47036171-47035808 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 247 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 88, 35 |
| Conread position: | 82-356 |
| Cow position: | chr19:35538991-35538714 (view UCSC Genome Browser custom track) |
| Alignm length: | 280 |
| Alignm identity: | 188 |
| Alignm E-value: | 8e-32 |
| Alignm gaps (pig, cow): | 79, 29 |
| Conread position: | 83-382 |
| Cow position: | chr19:17732385-17732686 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 206 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 84, 28 |
| Conread position: | 114-382 |
| Cow position: | chr19:32056437-32056164 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 184 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 39, 81 |
| Conread position: | 117-311 |
| Cow position: | chr19:7567942-7568140 (view UCSC Genome Browser custom track) |
| Alignm length: | 201 |
| Alignm identity: | 145 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 46, 86 |
| Conread position: | 121-315 |
| Cow position: | chr19:26252879-26253077 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 151 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 45, 138 |
| Conread position: | 121-317 |
| Cow position: | chr19:28445511-28445306 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 154 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 41, 88 |
| Conread position: | 121-348 |
| Cow position: | chr19:5630669-5630440 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 156 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 46, 106 |
| Conread position: | 121-367 |
| Cow position: | chr19:36037400-36037644 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 176 |
| Conread position: | 121-388 |
| Cow position: | chr19:8964876-8965150 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 181 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 53, 80 |
| Conread position: | 121-391 |
| Cow position: | chr19:7126766-7127036 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 188 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 37, 80 |
| Conread position: | 121-445 |
| Cow position: | chr19:22860082-22859743 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 240 |
| Alignm E-value: | 4e-36 |
| Alignm gaps (pig, cow): | 47, 150 |
| Conread position: | 122-360 |
| Cow position: | chr19:47127825-47128073 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 169 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 46, 108 |
| Conread position: | 124-383 |
| Cow position: | chr19:2619695-2619958 (view UCSC Genome Browser custom track) |
| Alignm length: | 267 |
| Alignm identity: | 177 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 44, 9 |
| Conread position: | 138-389 |
| Cow position: | chr19:25272006-25272261 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 175 |
| Alignm E-value: | 5e-28 |
| Alignm gaps (pig, cow): | 30, 100 |
| Conread position: | 144-423 |
| Cow position: | chr19:15096763-15097038 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 12, 23 |
| Conread position: | 165-355 |
| Cow position: | chr19:42767704-42767513 (view UCSC Genome Browser custom track) |
| Alignm length: | 193 |
| Alignm identity: | 133 |
| Alignm E-value: | 9e-23 |
| Alignm gaps (pig, cow): | 19, 41 |
| Conread position: | 165-468 |
| Cow position: | chr19:2311463-2311770 (view UCSC Genome Browser custom track) |
| Alignm length: | 312 |
| Alignm identity: | 198 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 131, 201 |
| Conread position: | 171-352 |
| Cow position: | chr19:42874064-42874246 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 135 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 171-383 |
| Cow position: | chr19:46447906-46448119 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 24, 0 |
| Conread position: | 171-389 |
| Cow position: | chr19:8245950-8245733 (view UCSC Genome Browser custom track) |
| Alignm length: | 221 |
| Alignm identity: | 147 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 118, 106 |
| Conread position: | 172-356 |
| Cow position: | chr19:3423132-3422949 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 126 |
| Alignm E-value: | 8e-22 |
| Alignm gaps (pig, cow): | 8, 0 |
| Conread position: | 186-446 |
| Cow position: | chr19:35996185-35996442 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 172 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 192, 16 |
| Conread position: | 202-359 |
| Cow position: | chr19:43069524-43069676 (view UCSC Genome Browser custom track) |
| Alignm length: | 158 |
| Alignm identity: | 114 |
| Alignm E-value: | 7e-21 |
| Alignm gaps (pig, cow): | 31, 0 |
| Conread position: | 207-388 |
| Cow position: | chr19:17749014-17749195 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 134 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 78, 71 |
Show alignments to all cow chromosomes.