Cow genome map


           Conread name:
           Ss1.1-rnmm34c_b15.5
        

               Conread position:
               1-335
               

               Cow position:
               
               

               Alignm length:
               341
               

               Alignm identity:
               224
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               155, 17
               

               Conread position:
               1-387
               

               Cow position:
               
               

               Alignm length:
               404
               

               Alignm identity:
               259
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               79, 7
               

               Conread position:
               5-391
               

               Cow position:
               
               

               Alignm length:
               399
               

               Alignm identity:
               261
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               73, 21
               

               Conread position:
               8-316
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               220
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               70, 50
               

               Conread position:
               8-341
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               231
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               70, 114
               

               Conread position:
               8-381
               

               Cow position:
               
               

               Alignm length:
               384
               

               Alignm identity:
               245
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               113, 27
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               396
               

               Alignm identity:
               252
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               44, 106
               

               Conread position:
               11-356
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               99, 12
               

               Conread position:
               13-356
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               72, 17
               

               Conread position:
               13-356
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               225
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               13-389
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               248
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               65, 192
               

               Conread position:
               13-389
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               65, 107
               

               Conread position:
               13-389
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               65, 369
               

               Conread position:
               13-464
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               299
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               68, 39
               

               Conread position:
               23-297
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               140, 89
               

               Conread position:
               24-385
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               241
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               54, 187
               

               Conread position:
               69-360
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               195
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               90, 10
               

               Conread position:
               79-360
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               195
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 32
               

               Conread position:
               79-360
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               189
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               84, 35
               

               Conread position:
               79-389
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               84, 19
               

               Conread position:
               82-399
               

               Cow position:
               
               

               Alignm length:
               324
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               71, 17
               

               Conread position:
               83-382
               

               Cow position:
               
               

               Alignm length:
               300
               

               Alignm identity:
               191
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               29, 0
               

               Conread position:
               87-382
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               196
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               76, 27
               

               Conread position:
               88-360
               

               Cow position:
               
               

               Alignm length:
               279
               

               Alignm identity:
               187
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               72, 29
               

               Conread position:
               88-448
               

               Cow position:
               
               

               Alignm length:
               380
               

               Alignm identity:
               251
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               55, 23
               

               Conread position:
               114-391
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               194
               

               Alignm E-value:
               6e-36
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               120-389
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               47, 36
               

               Conread position:
               121-359
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               158
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               45, 0
               

               Conread position:
               121-383
               

               Cow position:
               
               

               Alignm length:
               274
               

               Alignm identity:
               184
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               42, 114
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               273
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               46, 117
               

               Conread position:
               121-432
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               38, 77
               

               Conread position:
               121-448
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               44, 163
               

               Conread position:
               123-388
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               42, 167
               

               Conread position:
               124-360
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               39, 74
               

               Conread position:
               125-399
               

               Cow position:
               
               

               Alignm length:
               280
               

               Alignm identity:
               184
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               33, 76
               

               Conread position:
               126-388
               

               Cow position:
               
               

               Alignm length:
               271
               

               Alignm identity:
               178
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               32, 166
               

               Conread position:
               138-463
               

               Cow position:
               
               

               Alignm length:
               337
               

               Alignm identity:
               218
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               27, 103
               

               Conread position:
               144-333
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               140
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               22, 140
               

               Conread position:
               145-385
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               168
               

               Alignm E-value:
               9e-29
               

               Alignm gaps (pig, cow):
               18, 77
               

               Conread position:
               147-388
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               169
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               19, 9
               

               Conread position:
               160-355
               

               Cow position:
               
               

               Alignm length:
               197
               

               Alignm identity:
               144
               

               Alignm E-value:
               4e-32
               

               Alignm gaps (pig, cow):
               125, 118
               

               Conread position:
               171-327
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               118
               

               Alignm E-value:
               6e-26
               

               Alignm gaps (pig, cow):
               13, 138
               

               Conread position:
               171-368
               

               Cow position:
               
               

               Alignm length:
               199
               

               Alignm identity:
               142
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               119, 109
               

               Conread position:
               171-384
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               98, 26
               

               Conread position:
               171-389
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               147
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               115, 0
               

               Conread position:
               171-389
               

               Cow position:
               
               

               Alignm length:
               222
               

               Alignm identity:
               154
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               87, 72
               

               Conread position:
               172-389
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               152
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               50, 0
               

               Conread position:
               180-367
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               134
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               25, 0
               

               Conread position:
               186-471
               

               Cow position:
               
               

               Alignm length:
               302
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               189, 115
               

               Conread position:
               187-423
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               165
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               188, 165
               

               Conread position:
               188-388
               

               Cow position:
               
               

               Alignm length:
               202
               

               Alignm identity:
               138
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               95, 90
               

               Conread position:
               202-389
               

               Cow position:
               
               

               Alignm length:
               188
               

               Alignm identity:
               133
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               229-445
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               147, 160
               
Show alignments to all cow chromosomes.