Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 4-389 |
| Cow position: | chr22:23951346-23950954 (view UCSC Genome Browser custom track) |
| Alignm length: | 400 |
| Alignm identity: | 253 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 11, 117 |
| Conread position: | 8-318 |
| Cow position: | chr22:42723013-42722698 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 204 |
| Alignm E-value: | 8e-23 |
| Alignm gaps (pig, cow): | 67, 121 |
| Conread position: | 8-383 |
| Cow position: | chr22:33409557-33409171 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 242 |
| Alignm E-value: | 3e-24 |
| Alignm gaps (pig, cow): | 72, 61 |
| Conread position: | 8-389 |
| Cow position: | chr22:42841103-42840718 (view UCSC Genome Browser custom track) |
| Alignm length: | 394 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 98, 29 |
| Conread position: | 8-445 |
| Cow position: | chr22:37996765-37996320 (view UCSC Genome Browser custom track) |
| Alignm length: | 453 |
| Alignm identity: | 315 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 160, 71 |
| Conread position: | 9-389 |
| Cow position: | chr22:11353053-11352677 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 243 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 167, 109 |
| Conread position: | 13-380 |
| Cow position: | chr22:19941993-19941620 (view UCSC Genome Browser custom track) |
| Alignm length: | 380 |
| Alignm identity: | 245 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 79, 109 |
| Conread position: | 16-391 |
| Cow position: | chr22:15952111-15951736 (view UCSC Genome Browser custom track) |
| Alignm length: | 385 |
| Alignm identity: | 241 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 64, 101 |
| Conread position: | 17-448 |
| Cow position: | chr22:12428005-12427557 (view UCSC Genome Browser custom track) |
| Alignm length: | 459 |
| Alignm identity: | 341 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 292, 87 |
| Conread position: | 18-443 |
| Cow position: | chr22:33956078-33956520 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 307 |
| Alignm E-value: | 4e-37 |
| Alignm gaps (pig, cow): | 62, 47 |
| Conread position: | 23-442 |
| Cow position: | chr22:9119211-9119645 (view UCSC Genome Browser custom track) |
| Alignm length: | 440 |
| Alignm identity: | 288 |
| Alignm E-value: | 3e-36 |
| Alignm gaps (pig, cow): | 77, 360 |
| Conread position: | 72-386 |
| Cow position: | chr22:40782008-40782317 (view UCSC Genome Browser custom track) |
| Alignm length: | 320 |
| Alignm identity: | 208 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 44, 50 |
| Conread position: | 79-306 |
| Cow position: | chr22:41306540-41306770 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-26 |
| Alignm gaps (pig, cow): | 25, 33 |
| Conread position: | 79-389 |
| Cow position: | chr22:31154717-31154405 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 223 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 80, 32 |
| Conread position: | 121-364 |
| Cow position: | chr22:16677471-16677721 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 170 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 42, 175 |
| Conread position: | 121-367 |
| Cow position: | chr22:13864539-13864289 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 52, 161 |
| Conread position: | 122-388 |
| Cow position: | chr22:6947921-6948182 (view UCSC Genome Browser custom track) |
| Alignm length: | 269 |
| Alignm identity: | 175 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 47, 94 |
| Conread position: | 126-383 |
| Cow position: | chr22:8592937-8592679 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 170 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 39, 80 |
| Conread position: | 126-384 |
| Cow position: | chr22:12037102-12036840 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 173 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 37, 81 |
| Conread position: | 142-360 |
| Cow position: | chr22:9143661-9143883 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 158 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 21, 57 |
| Conread position: | 171-382 |
| Cow position: | chr22:25987579-25987787 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 149 |
| Alignm E-value: | 5e-29 |
| Alignm gaps (pig, cow): | 16, 0 |
| Conread position: | 171-383 |
| Cow position: | chr22:20931495-20931708 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 4e-26 |
| Alignm gaps (pig, cow): | 209, 0 |
| Conread position: | 171-389 |
| Cow position: | chr22:32120502-32120285 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 162 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 158, 22 |
| Conread position: | 171-389 |
| Cow position: | chr22:38317154-38316934 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 148 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 145, 102 |
| Conread position: | 171-422 |
| Cow position: | chr22:14336741-14336497 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 111, 99 |
| Conread position: | 172-386 |
| Cow position: | chr22:18550578-18550366 (view UCSC Genome Browser custom track) |
| Alignm length: | 217 |
| Alignm identity: | 149 |
| Alignm E-value: | 9e-24 |
| Alignm gaps (pig, cow): | 117, 8 |
| Conread position: | 172-386 |
| Cow position: | chr22:43566654-43566444 (view UCSC Genome Browser custom track) |
| Alignm length: | 215 |
| Alignm identity: | 145 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 0 |
| Conread position: | 172-399 |
| Cow position: | chr22:12446127-12446349 (view UCSC Genome Browser custom track) |
| Alignm length: | 229 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 203, 29 |
| Conread position: | 174-389 |
| Cow position: | chr22:5038298-5038513 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 152 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 20, 85 |
| Conread position: | 186-392 |
| Cow position: | chr22:39212578-39212784 (view UCSC Genome Browser custom track) |
| Alignm length: | 208 |
| Alignm identity: | 139 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 128, 83 |
| Conread position: | 187-383 |
| Cow position: | chr22:14104099-14104294 (view UCSC Genome Browser custom track) |
| Alignm length: | 198 |
| Alignm identity: | 138 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 69, 105 |
Show alignments to all cow chromosomes.