Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 1-389 |
| Cow position: | chr25:18666706-18667108 (view UCSC Genome Browser custom track) |
| Alignm length: | 406 |
| Alignm identity: | 260 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 9, 71 |
| Conread position: | 6-376 |
| Cow position: | chr25:20008387-20008770 (view UCSC Genome Browser custom track) |
| Alignm length: | 387 |
| Alignm identity: | 244 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 62, 119 |
| Conread position: | 8-356 |
| Cow position: | chr25:33206285-33205923 (view UCSC Genome Browser custom track) |
| Alignm length: | 368 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 70, 139 |
| Conread position: | 8-383 |
| Cow position: | chr25:30636422-30636039 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 261 |
| Alignm E-value: | 1e-39 |
| Alignm gaps (pig, cow): | 70, 99 |
| Conread position: | 8-389 |
| Cow position: | chr25:38045952-38046333 (view UCSC Genome Browser custom track) |
| Alignm length: | 392 |
| Alignm identity: | 257 |
| Alignm E-value: | 8e-35 |
| Alignm gaps (pig, cow): | 154, 91 |
| Conread position: | 13-354 |
| Cow position: | chr25:20597500-20597842 (view UCSC Genome Browser custom track) |
| Alignm length: | 349 |
| Alignm identity: | 229 |
| Alignm E-value: | 6e-33 |
| Alignm gaps (pig, cow): | 82, 101 |
| Conread position: | 13-380 |
| Cow position: | chr25:21455795-21456158 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 239 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 54, 86 |
| Conread position: | 18-312 |
| Cow position: | chr25:14797959-14797674 (view UCSC Genome Browser custom track) |
| Alignm length: | 295 |
| Alignm identity: | 189 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 96, 0 |
| Conread position: | 23-347 |
| Cow position: | chr25:36754867-36755206 (view UCSC Genome Browser custom track) |
| Alignm length: | 342 |
| Alignm identity: | 225 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 74, 282 |
| Conread position: | 62-442 |
| Cow position: | chr25:21277507-21277889 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 101, 35 |
| Conread position: | 78-343 |
| Cow position: | chr25:15309413-15309678 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 177 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 81, 34 |
| Conread position: | 82-391 |
| Cow position: | chr25:13332824-13333134 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 207 |
| Alignm E-value: | 4e-29 |
| Alignm gaps (pig, cow): | 78, 30 |
| Conread position: | 112-389 |
| Cow position: | chr25:11634923-11635194 (view UCSC Genome Browser custom track) |
| Alignm length: | 279 |
| Alignm identity: | 188 |
| Alignm E-value: | 5e-31 |
| Alignm gaps (pig, cow): | 263, 27 |
| Conread position: | 120-390 |
| Cow position: | chr25:18997051-18996776 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 181 |
| Alignm E-value: | 7e-24 |
| Alignm gaps (pig, cow): | 45, 25 |
| Conread position: | 121-389 |
| Cow position: | chr25:24953125-24952853 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 189 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 37, 128 |
| Conread position: | 127-360 |
| Cow position: | chr25:10394619-10394382 (view UCSC Genome Browser custom track) |
| Alignm length: | 240 |
| Alignm identity: | 168 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 39, 58 |
| Conread position: | 138-316 |
| Cow position: | chr25:35331056-35330874 (view UCSC Genome Browser custom track) |
| Alignm length: | 183 |
| Alignm identity: | 129 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 29, 0 |
| Conread position: | 142-389 |
| Cow position: | chr25:19142928-19142682 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 174 |
| Alignm E-value: | 6e-32 |
| Alignm gaps (pig, cow): | 21, 34 |
| Conread position: | 152-350 |
| Cow position: | chr25:32497596-32497794 (view UCSC Genome Browser custom track) |
| Alignm length: | 200 |
| Alignm identity: | 140 |
| Alignm E-value: | 3e-27 |
| Alignm gaps (pig, cow): | 56, 173 |
| Conread position: | 172-389 |
| Cow position: | chr25:35055366-35055582 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 159 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 63, 29 |
| Conread position: | 172-444 |
| Cow position: | chr25:5154986-5154713 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 184 |
| Alignm E-value: | 1e-27 |
| Alignm gaps (pig, cow): | 221, 252 |
| Conread position: | 208-487 |
| Cow position: | chr25:17717101-17717370 (view UCSC Genome Browser custom track) |
| Alignm length: | 281 |
| Alignm identity: | 182 |
| Alignm E-value: | 5e-21 |
| Alignm gaps (pig, cow): | 25, 112 |
Show alignments to all cow chromosomes.