Cow genome map

Conread name: Ss1.1-rnmm34c_b15.5

Conread position: 8-359
Cow position: chr28:9341078-9340717 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 247
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 72, 122

Conread position: 8-388
Cow position: chr28:33019455-33019842 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 265
Alignm E-value: 2e-33
Alignm gaps (pig, cow): 63, 118

Conread position: 8-389
Cow position: chr28:8958822-8959212 (view UCSC Genome Browser custom track)
Alignm length: 396
Alignm identity: 263
Alignm E-value: 4.00001e-40
Alignm gaps (pig, cow): 98, 44

Conread position: 12-348
Cow position: chr28:24015173-24015519 (view UCSC Genome Browser custom track)
Alignm length: 348
Alignm identity: 233
Alignm E-value: 8e-37
Alignm gaps (pig, cow): 88, 235

Conread position: 13-343
Cow position: chr28:7320461-7320130 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 223
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 16, 56

Conread position: 13-392
Cow position: chr28:7214307-7213920 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 247
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 65, 104

Conread position: 18-385
Cow position: chr28:30262825-30262439 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 263
Alignm E-value: 3e-39
Alignm gaps (pig, cow): 60, 179

Conread position: 51-389
Cow position: chr28:34422509-34422850 (view UCSC Genome Browser custom track)
Alignm length: 349
Alignm identity: 220
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 112, 26

Conread position: 79-389
Cow position: chr28:616735-617045 (view UCSC Genome Browser custom track)
Alignm length: 318
Alignm identity: 212
Alignm E-value: 1e-29
Alignm gaps (pig, cow): 84, 33

Conread position: 82-389
Cow position: chr28:344644-344947 (view UCSC Genome Browser custom track)
Alignm length: 314
Alignm identity: 204
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 76, 29

Conread position: 88-339
Cow position: chr28:26548310-26548571 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 188
Alignm E-value: 2e-36
Alignm gaps (pig, cow): 69, 27

Conread position: 88-448
Cow position: chr28:22466212-22465841 (view UCSC Genome Browser custom track)
Alignm length: 379
Alignm identity: 262
Alignm E-value: 9.99967e-42
Alignm gaps (pig, cow): 75, 23

Conread position: 106-359
Cow position: chr28:17940445-17940185 (view UCSC Genome Browser custom track)
Alignm length: 262
Alignm identity: 172
Alignm E-value: 2e-23
Alignm gaps (pig, cow): 72, 59

Conread position: 120-448
Cow position: chr28:589236-588900 (view UCSC Genome Browser custom track)
Alignm length: 343
Alignm identity: 221
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 38, 139

Conread position: 121-459
Cow position: chr28:17169424-17169083 (view UCSC Genome Browser custom track)
Alignm length: 353
Alignm identity: 230
Alignm E-value: 6e-23
Alignm gaps (pig, cow): 37, 64

Conread position: 122-448
Cow position: chr28:27804501-27804831 (view UCSC Genome Browser custom track)
Alignm length: 339
Alignm identity: 223
Alignm E-value: 9e-27
Alignm gaps (pig, cow): 51, 108

Conread position: 124-318
Cow position: chr28:28552101-28552299 (view UCSC Genome Browser custom track)
Alignm length: 199
Alignm identity: 142
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 41, 0

Conread position: 124-391
Cow position: chr28:32822464-32822199 (view UCSC Genome Browser custom track)
Alignm length: 273
Alignm identity: 189
Alignm E-value: 5e-32
Alignm gaps (pig, cow): 41, 26

Conread position: 124-444
Cow position: chr28:20013784-20014110 (view UCSC Genome Browser custom track)
Alignm length: 332
Alignm identity: 212
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 40, 143

Conread position: 142-440
Cow position: chr28:3845264-3845575 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 213
Alignm E-value: 3e-27
Alignm gaps (pig, cow): 21, 8

Conread position: 159-418
Cow position: chr28:24637837-24637586 (view UCSC Genome Browser custom track)
Alignm length: 263
Alignm identity: 176
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 20, 74

Conread position: 166-388
Cow position: chr28:24568670-24568896 (view UCSC Genome Browser custom track)
Alignm length: 229
Alignm identity: 155
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 169, 61

Conread position: 171-355
Cow position: chr28:20253271-20253454 (view UCSC Genome Browser custom track)
Alignm length: 187
Alignm identity: 131
Alignm E-value: 5e-22
Alignm gaps (pig, cow): 62, 9

Conread position: 171-360
Cow position: chr28:19898995-19898807 (view UCSC Genome Browser custom track)
Alignm length: 190
Alignm identity: 129
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 56, 0

Conread position: 171-382
Cow position: chr28:28598944-28599155 (view UCSC Genome Browser custom track)
Alignm length: 214
Alignm identity: 150
Alignm E-value: 3e-28
Alignm gaps (pig, cow): 118, 107

Conread position: 172-356
Cow position: chr28:27496460-27496277 (view UCSC Genome Browser custom track)
Alignm length: 185
Alignm identity: 125
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 155, 0

Conread position: 172-382
Cow position: chr28:29762727-29762942 (view UCSC Genome Browser custom track)
Alignm length: 217
Alignm identity: 150
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 95, 195

Conread position: 172-475
Cow position: chr28:34094692-34094398 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 201
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 113, 63

Conread position: 173-389
Cow position: chr28:409478-409263 (view UCSC Genome Browser custom track)
Alignm length: 218
Alignm identity: 147
Alignm E-value: 2e-24
Alignm gaps (pig, cow): 14, 72

Conread position: 193-426
Cow position: chr28:23094772-23095009 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 163
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 198, 159

Conread position: 207-356
Cow position: chr28:28039503-28039649 (view UCSC Genome Browser custom track)
Alignm length: 150
Alignm identity: 109
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 42, 0

Conread position: 224-388
Cow position: chr28:2357804-2357968 (view UCSC Genome Browser custom track)
Alignm length: 167
Alignm identity: 119
Alignm E-value: 5e-21
Alignm gaps (pig, cow): 10, 38

Show alignments to all cow chromosomes.