Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 2-445 |
| Cow position: | chr29:34956889-34957333 (view UCSC Genome Browser custom track) |
| Alignm length: | 455 |
| Alignm identity: | 284 |
| Alignm E-value: | 4e-28 |
| Alignm gaps (pig, cow): | 7, 112 |
| Conread position: | 4-392 |
| Cow position: | chr29:9801026-9801418 (view UCSC Genome Browser custom track) |
| Alignm length: | 398 |
| Alignm identity: | 247 |
| Alignm E-value: | 3e-25 |
| Alignm gaps (pig, cow): | 123, 41 |
| Conread position: | 5-423 |
| Cow position: | chr29:26016811-26017253 (view UCSC Genome Browser custom track) |
| Alignm length: | 449 |
| Alignm identity: | 296 |
| Alignm E-value: | 7e-33 |
| Alignm gaps (pig, cow): | 76, 42 |
| Conread position: | 8-389 |
| Cow position: | chr29:6437501-6437891 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 255 |
| Alignm E-value: | 2e-33 |
| Alignm gaps (pig, cow): | 68, 113 |
| Conread position: | 8-389 |
| Cow position: | chr29:34287716-34287322 (view UCSC Genome Browser custom track) |
| Alignm length: | 401 |
| Alignm identity: | 259 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 69, 116 |
| Conread position: | 8-402 |
| Cow position: | chr29:5311208-5310793 (view UCSC Genome Browser custom track) |
| Alignm length: | 421 |
| Alignm identity: | 285 |
| Alignm E-value: | 1.99993e-41 |
| Alignm gaps (pig, cow): | 28, 118 |
| Conread position: | 11-356 |
| Cow position: | chr29:12292955-12292598 (view UCSC Genome Browser custom track) |
| Alignm length: | 366 |
| Alignm identity: | 235 |
| Alignm E-value: | 2e-22 |
| Alignm gaps (pig, cow): | 68, 54 |
| Conread position: | 13-296 |
| Cow position: | chr29:19400161-19400444 (view UCSC Genome Browser custom track) |
| Alignm length: | 291 |
| Alignm identity: | 191 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 148, 44 |
| Conread position: | 13-402 |
| Cow position: | chr29:34552585-34552999 (view UCSC Genome Browser custom track) |
| Alignm length: | 418 |
| Alignm identity: | 275 |
| Alignm E-value: | 2e-32 |
| Alignm gaps (pig, cow): | 63, 119 |
| Conread position: | 24-445 |
| Cow position: | chr29:12449649-12450084 (view UCSC Genome Browser custom track) |
| Alignm length: | 443 |
| Alignm identity: | 276 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 53, 95 |
| Conread position: | 82-445 |
| Cow position: | chr29:11695940-11696308 (view UCSC Genome Browser custom track) |
| Alignm length: | 375 |
| Alignm identity: | 234 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 78, 32 |
| Conread position: | 88-448 |
| Cow position: | chr29:18960822-18961181 (view UCSC Genome Browser custom track) |
| Alignm length: | 367 |
| Alignm identity: | 241 |
| Alignm E-value: | 8e-34 |
| Alignm gaps (pig, cow): | 72, 24 |
| Conread position: | 91-294 |
| Cow position: | chr29:3692050-3692256 (view UCSC Genome Browser custom track) |
| Alignm length: | 209 |
| Alignm identity: | 143 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 70, 20 |
| Conread position: | 113-383 |
| Cow position: | chr29:26009920-26010193 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-30 |
| Alignm gaps (pig, cow): | 51, 93 |
| Conread position: | 115-390 |
| Cow position: | chr29:33101690-33101972 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 191 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 50, 261 |
| Conread position: | 121-383 |
| Cow position: | chr29:5770814-5771081 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 178 |
| Alignm E-value: | 1e-28 |
| Alignm gaps (pig, cow): | 43, 0 |
| Conread position: | 122-385 |
| Cow position: | chr29:14388864-14388599 (view UCSC Genome Browser custom track) |
| Alignm length: | 268 |
| Alignm identity: | 175 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 34, 97 |
| Conread position: | 123-407 |
| Cow position: | chr29:5363866-5363585 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 186 |
| Alignm E-value: | 2e-23 |
| Alignm gaps (pig, cow): | 34, 77 |
| Conread position: | 124-360 |
| Cow position: | chr29:39293424-39293181 (view UCSC Genome Browser custom track) |
| Alignm length: | 245 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 42, 78 |
| Conread position: | 124-383 |
| Cow position: | chr29:19394853-19395111 (view UCSC Genome Browser custom track) |
| Alignm length: | 266 |
| Alignm identity: | 181 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 38, 130 |
| Conread position: | 167-389 |
| Cow position: | chr29:26458358-26458136 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 147 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 167-441 |
| Cow position: | chr29:37270844-37270571 (view UCSC Genome Browser custom track) |
| Alignm length: | 282 |
| Alignm identity: | 186 |
| Alignm E-value: | 7e-23 |
| Alignm gaps (pig, cow): | 141, 77 |
| Conread position: | 171-445 |
| Cow position: | chr29:28675130-28675397 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 181 |
| Alignm E-value: | 2e-21 |
| Alignm gaps (pig, cow): | 47, 9 |
| Conread position: | 174-422 |
| Cow position: | chr29:35227321-35227072 (view UCSC Genome Browser custom track) |
| Alignm length: | 253 |
| Alignm identity: | 170 |
| Alignm E-value: | 3e-26 |
| Alignm gaps (pig, cow): | 30, 23 |
| Conread position: | 186-448 |
| Cow position: | chr29:3663652-3663921 (view UCSC Genome Browser custom track) |
| Alignm length: | 273 |
| Alignm identity: | 194 |
| Alignm E-value: | 4e-38 |
| Alignm gaps (pig, cow): | 205, 247 |
| Conread position: | 193-403 |
| Cow position: | chr29:26958146-26957937 (view UCSC Genome Browser custom track) |
| Alignm length: | 213 |
| Alignm identity: | 144 |
| Alignm E-value: | 7e-22 |
| Alignm gaps (pig, cow): | 16, 178 |
| Conread position: | 205-389 |
| Cow position: | chr29:20923333-20923150 (view UCSC Genome Browser custom track) |
| Alignm length: | 185 |
| Alignm identity: | 125 |
| Alignm E-value: | 6e-21 |
| Alignm gaps (pig, cow): | 103, 0 |
| Conread position: | 219-465 |
| Cow position: | chr29:27305858-27306106 (view UCSC Genome Browser custom track) |
| Alignm length: | 256 |
| Alignm identity: | 176 |
| Alignm E-value: | 9e-25 |
| Alignm gaps (pig, cow): | 156, 79 |
Show alignments to all cow chromosomes.