Cow genome map


           Conread name:
           Ss1.1-rnmm34c_b15.5
        

               Conread position:
               3-448
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               92, 0
               

               Conread position:
               4-333
               

               Cow position:
               
               

               Alignm length:
               342
               

               Alignm identity:
               225
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               102, 74
               

               Conread position:
               8-383
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               255
               

               Alignm E-value:
               7e-38
               

               Alignm gaps (pig, cow):
               118, 335
               

               Conread position:
               8-384
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               245
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               70, 49
               

               Conread position:
               8-392
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               242
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               122, 44
               

               Conread position:
               8-462
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               303
               

               Alignm E-value:
               7e-27
               

               Alignm gaps (pig, cow):
               80, 312
               

               Conread position:
               11-391
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               258
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               18, 197
               

               Conread position:
               11-424
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               264
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               146, 69
               

               Conread position:
               11-453
               

               Cow position:
               
               

               Alignm length:
               453
               

               Alignm identity:
               288
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               67, 170
               

               Conread position:
               13-367
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               62, 137
               

               Conread position:
               14-311
               

               Cow position:
               
               

               Alignm length:
               311
               

               Alignm identity:
               214
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               85, 212
               

               Conread position:
               36-389
               

               Cow position:
               
               

               Alignm length:
               370
               

               Alignm identity:
               233
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               44, 0
               

               Conread position:
               79-389
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               216
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               25, 36
               

               Conread position:
               79-444
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               231
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               63, 31
               

               Conread position:
               82-383
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               81, 29
               

               Conread position:
               82-389
               

               Cow position:
               
               

               Alignm length:
               310
               

               Alignm identity:
               193
               

               Alignm E-value:
               4e-21
               

               Alignm gaps (pig, cow):
               135, 30
               

               Conread position:
               112-421
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               206
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               55, 172
               

               Conread position:
               120-424
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               45, 164
               

               Conread position:
               121-337
               

               Cow position:
               
               

               Alignm length:
               231
               

               Alignm identity:
               166
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               42, 89
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               178
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               38, 91
               

               Conread position:
               121-421
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               206
               

               Alignm E-value:
               1e-30
               

               Alignm gaps (pig, cow):
               44, 102
               

               Conread position:
               124-356
               

               Cow position:
               
               

               Alignm length:
               239
               

               Alignm identity:
               172
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               41, 138
               

               Conread position:
               137-337
               

               Cow position:
               
               

               Alignm length:
               206
               

               Alignm identity:
               150
               

               Alignm E-value:
               1e-29
               

               Alignm gaps (pig, cow):
               26, 166
               

               Conread position:
               138-387
               

               Cow position:
               
               

               Alignm length:
               256
               

               Alignm identity:
               172
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               30, 90
               

               Conread position:
               157-445
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               198
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               218, 124
               

               Conread position:
               165-354
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               130
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               124, 113
               

               Conread position:
               171-382
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               149
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               118, 107
               

               Conread position:
               171-391
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               152
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               115, 107
               

               Conread position:
               171-391
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               150
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               171-392
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               157
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               118, 9
               

               Conread position:
               171-413
               

               Cow position:
               
               

               Alignm length:
               245
               

               Alignm identity:
               163
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               126, 109
               

               Conread position:
               172-350
               

               Cow position:
               
               

               Alignm length:
               179
               

               Alignm identity:
               127
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               172-384
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               148
               

               Alignm E-value:
               3e-28
               

               Alignm gaps (pig, cow):
               51, 0
               

               Conread position:
               172-388
               

               Cow position:
               
               

               Alignm length:
               218
               

               Alignm identity:
               147
               

               Alignm E-value:
               6e-25
               

               Alignm gaps (pig, cow):
               174, 167
               

               Conread position:
               172-389
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               146
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               117, 106
               

               Conread position:
               172-453
               

               Cow position:
               
               

               Alignm length:
               289
               

               Alignm identity:
               185
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               216, 190
               

               Conread position:
               173-355
               

               Cow position:
               
               

               Alignm length:
               183
               

               Alignm identity:
               135
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               86, 0
               

               Conread position:
               174-388
               

               Cow position:
               
               

               Alignm length:
               216
               

               Alignm identity:
               146
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               41, 67
               

               Conread position:
               180-383
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               138
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               42, 0
               

               Conread position:
               180-443
               

               Cow position:
               
               

               Alignm length:
               264
               

               Alignm identity:
               179
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               181-449
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               188
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               65, 98
               

               Conread position:
               191-360
               

               Cow position:
               
               

               Alignm length:
               170
               

               Alignm identity:
               122
               

               Alignm E-value:
               2e-23
               

               Alignm gaps (pig, cow):
               75, 0
               

               Conread position:
               207-419
               

               Cow position:
               
               

               Alignm length:
               213
               

               Alignm identity:
               143
               

               Alignm E-value:
               5e-23
               

               Alignm gaps (pig, cow):
               16, 0
               

               Conread position:
               211-359
               

               Cow position:
               
               

               Alignm length:
               150
               

               Alignm identity:
               111
               

               Alignm E-value:
               5e-24
               

               Alignm gaps (pig, cow):
               62, 0
               

               Conread position:
               223-485
               

               Cow position:
               
               

               Alignm length:
               266
               

               Alignm identity:
               180
               

               Alignm E-value:
               8e-28
               

               Alignm gaps (pig, cow):
               105, 164
               
Show alignments to all cow chromosomes.