Cow genome map

Conread name: Ss1.1-rnmm34c_b15.5

Conread position: 3-383
Cow position: chr4:54191396-54191789 (view UCSC Genome Browser custom track)
Alignm length: 397
Alignm identity: 261
Alignm E-value: 2e-37
Alignm gaps (pig, cow): 75, 114

Conread position: 5-389
Cow position: chr4:13145309-13145699 (view UCSC Genome Browser custom track)
Alignm length: 398
Alignm identity: 258
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 82, 31

Conread position: 5-389
Cow position: chr4:18117633-18117259 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 258
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 100, 64

Conread position: 6-391
Cow position: chr4:59553332-59552943 (view UCSC Genome Browser custom track)
Alignm length: 395
Alignm identity: 247
Alignm E-value: 6e-27
Alignm gaps (pig, cow): 91, 205

Conread position: 8-356
Cow position: chr4:52252771-52253134 (view UCSC Genome Browser custom track)
Alignm length: 365
Alignm identity: 230
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 71, 285

Conread position: 8-367
Cow position: chr4:40650412-40650032 (view UCSC Genome Browser custom track)
Alignm length: 384
Alignm identity: 250
Alignm E-value: 6e-28
Alignm gaps (pig, cow): 70, 168

Conread position: 8-384
Cow position: chr4:61128950-61128562 (view UCSC Genome Browser custom track)
Alignm length: 391
Alignm identity: 247
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 72, 304

Conread position: 8-389
Cow position: chr4:36755033-36755427 (view UCSC Genome Browser custom track)
Alignm length: 399
Alignm identity: 252
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 70, 114

Conread position: 8-389
Cow position: chr4:47288086-47288475 (view UCSC Genome Browser custom track)
Alignm length: 393
Alignm identity: 253
Alignm E-value: 1e-33
Alignm gaps (pig, cow): 70, 108

Conread position: 13-350
Cow position: chr4:18859755-18859402 (view UCSC Genome Browser custom track)
Alignm length: 355
Alignm identity: 235
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 63, 262

Conread position: 13-355
Cow position: chr4:11870222-11869887 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 243
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 73, 43

Conread position: 14-348
Cow position: chr4:43819947-43819600 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 224
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 64, 21

Conread position: 18-329
Cow position: chr4:43501791-43501470 (view UCSC Genome Browser custom track)
Alignm length: 323
Alignm identity: 207
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 63, 178

Conread position: 18-388
Cow position: chr4:14193896-14194274 (view UCSC Genome Browser custom track)
Alignm length: 383
Alignm identity: 253
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 79, 51

Conread position: 19-391
Cow position: chr4:43226955-43227334 (view UCSC Genome Browser custom track)
Alignm length: 388
Alignm identity: 250
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 59, 15

Conread position: 79-387
Cow position: chr4:50809407-50809709 (view UCSC Genome Browser custom track)
Alignm length: 309
Alignm identity: 210
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 32, 0

Conread position: 79-389
Cow position: chr4:19451542-19451230 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 205
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 95, 30

Conread position: 79-449
Cow position: chr4:44046877-44047240 (view UCSC Genome Browser custom track)
Alignm length: 378
Alignm identity: 251
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 88, 21

Conread position: 81-356
Cow position: chr4:65142611-65142329 (view UCSC Genome Browser custom track)
Alignm length: 286
Alignm identity: 191
Alignm E-value: 5e-26
Alignm gaps (pig, cow): 86, 30

Conread position: 90-445
Cow position: chr4:40576502-40576149 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 231
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 76, 24

Conread position: 115-448
Cow position: chr4:10133594-10133935 (view UCSC Genome Browser custom track)
Alignm length: 351
Alignm identity: 232
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 44, 156

Conread position: 120-317
Cow position: chr4:19227188-19227390 (view UCSC Genome Browser custom track)
Alignm length: 203
Alignm identity: 149
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 39, 0

Conread position: 120-389
Cow position: chr4:55126685-55126958 (view UCSC Genome Browser custom track)
Alignm length: 277
Alignm identity: 185
Alignm E-value: 2e-27
Alignm gaps (pig, cow): 28, 73

Conread position: 121-356
Cow position: chr4:11662757-11662996 (view UCSC Genome Browser custom track)
Alignm length: 242
Alignm identity: 161
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 37, 128

Conread position: 121-356
Cow position: chr4:23888807-23888569 (view UCSC Genome Browser custom track)
Alignm length: 241
Alignm identity: 163
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 42, 203

Conread position: 121-389
Cow position: chr4:35039379-35039106 (view UCSC Genome Browser custom track)
Alignm length: 276
Alignm identity: 178
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 44, 91

Conread position: 121-417
Cow position: chr4:16246578-16246284 (view UCSC Genome Browser custom track)
Alignm length: 302
Alignm identity: 203
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 45, 160

Conread position: 121-449
Cow position: chr4:44380203-44379871 (view UCSC Genome Browser custom track)
Alignm length: 341
Alignm identity: 227
Alignm E-value: 2e-29
Alignm gaps (pig, cow): 21, 110

Conread position: 123-360
Cow position: chr4:43855700-43855465 (view UCSC Genome Browser custom track)
Alignm length: 243
Alignm identity: 163
Alignm E-value: 3e-21
Alignm gaps (pig, cow): 42, 27

Conread position: 146-392
Cow position: chr4:54828783-54828537 (view UCSC Genome Browser custom track)
Alignm length: 250
Alignm identity: 164
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 20, 133

Conread position: 157-442
Cow position: chr4:35316563-35316847 (view UCSC Genome Browser custom track)
Alignm length: 296
Alignm identity: 207
Alignm E-value: 3e-32
Alignm gaps (pig, cow): 17, 112

Conread position: 171-372
Cow position: chr4:34492302-34492102 (view UCSC Genome Browser custom track)
Alignm length: 204
Alignm identity: 144
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 37, 66

Conread position: 171-389
Cow position: chr4:17855403-17855191 (view UCSC Genome Browser custom track)
Alignm length: 220
Alignm identity: 150
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 111, 84

Conread position: 172-443
Cow position: chr4:22674684-22674958 (view UCSC Genome Browser custom track)
Alignm length: 283
Alignm identity: 194
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 32, 15

Conread position: 173-345
Cow position: chr4:67645838-67645670 (view UCSC Genome Browser custom track)
Alignm length: 174
Alignm identity: 125
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 115, 28

Conread position: 173-389
Cow position: chr4:27352828-27352614 (view UCSC Genome Browser custom track)
Alignm length: 219
Alignm identity: 149
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 17, 11

Conread position: 180-360
Cow position: chr4:59786950-59787128 (view UCSC Genome Browser custom track)
Alignm length: 184
Alignm identity: 132
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 102, 21

Conread position: 180-383
Cow position: chr4:28421590-28421388 (view UCSC Genome Browser custom track)
Alignm length: 205
Alignm identity: 141
Alignm E-value: 1e-24
Alignm gaps (pig, cow): 143, 110

Conread position: 180-389
Cow position: chr4:41594088-41594291 (view UCSC Genome Browser custom track)
Alignm length: 210
Alignm identity: 145
Alignm E-value: 1e-23
Alignm gaps (pig, cow): 21, 0

Conread position: 186-382
Cow position: chr4:48542227-48542032 (view UCSC Genome Browser custom track)
Alignm length: 197
Alignm identity: 136
Alignm E-value: 2e-25
Alignm gaps (pig, cow): 99, 0

Conread position: 199-335
Cow position: chr4:58378958-58379095 (view UCSC Genome Browser custom track)
Alignm length: 139
Alignm identity: 106
Alignm E-value: 1e-22
Alignm gaps (pig, cow): 7, 29

Show alignments to all cow chromosomes.