Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 8-346 |
| Cow position: | chr6:2411995-2412337 (view UCSC Genome Browser custom track) |
| Alignm length: | 347 |
| Alignm identity: | 218 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 88, 278 |
| Conread position: | 8-356 |
| Cow position: | chr6:38915101-38915460 (view UCSC Genome Browser custom track) |
| Alignm length: | 361 |
| Alignm identity: | 244 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 69, 317 |
| Conread position: | 8-360 |
| Cow position: | chr6:6998771-6999123 (view UCSC Genome Browser custom track) |
| Alignm length: | 359 |
| Alignm identity: | 227 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 150, 137 |
| Conread position: | 8-388 |
| Cow position: | chr6:53380631-53381019 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 248 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 70, 43 |
| Conread position: | 8-389 |
| Cow position: | chr6:20094210-20093813 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 260 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 73, 204 |
| Conread position: | 8-416 |
| Cow position: | chr6:6039331-6039746 (view UCSC Genome Browser custom track) |
| Alignm length: | 424 |
| Alignm identity: | 269 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 69, 43 |
| Conread position: | 10-475 |
| Cow position: | chr6:47526782-47527264 (view UCSC Genome Browser custom track) |
| Alignm length: | 491 |
| Alignm identity: | 316 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 72, 313 |
| Conread position: | 79-342 |
| Cow position: | chr6:48473266-48473533 (view UCSC Genome Browser custom track) |
| Alignm length: | 271 |
| Alignm identity: | 180 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 79, 32 |
| Conread position: | 79-445 |
| Cow position: | chr6:9390683-9391052 (view UCSC Genome Browser custom track) |
| Alignm length: | 379 |
| Alignm identity: | 252 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 88, 21 |
| Conread position: | 87-463 |
| Cow position: | chr6:54140012-54139641 (view UCSC Genome Browser custom track) |
| Alignm length: | 383 |
| Alignm identity: | 252 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 24 |
| Conread position: | 104-310 |
| Cow position: | chr6:4525190-4524975 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 151 |
| Alignm E-value: | 1e-21 |
| Alignm gaps (pig, cow): | 56, 23 |
| Conread position: | 121-445 |
| Cow position: | chr6:29503520-29503848 (view UCSC Genome Browser custom track) |
| Alignm length: | 334 |
| Alignm identity: | 216 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 45, 156 |
| Conread position: | 123-330 |
| Cow position: | chr6:7817184-7817395 (view UCSC Genome Browser custom track) |
| Alignm length: | 214 |
| Alignm identity: | 145 |
| Alignm E-value: | 9e-21 |
| Alignm gaps (pig, cow): | 38, 161 |
| Conread position: | 124-417 |
| Cow position: | chr6:26867914-26868206 (view UCSC Genome Browser custom track) |
| Alignm length: | 299 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 34, 204 |
| Conread position: | 138-372 |
| Cow position: | chr6:19409887-19410122 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 165 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 30, 145 |
| Conread position: | 165-389 |
| Cow position: | chr6:54079795-54080016 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 153 |
| Alignm E-value: | 6e-27 |
| Alignm gaps (pig, cow): | 36, 0 |
| Conread position: | 171-356 |
| Cow position: | chr6:23811240-23811425 (view UCSC Genome Browser custom track) |
| Alignm length: | 187 |
| Alignm identity: | 134 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 118, 109 |
| Conread position: | 171-356 |
| Cow position: | chr6:38454930-38454745 (view UCSC Genome Browser custom track) |
| Alignm length: | 186 |
| Alignm identity: | 129 |
| Alignm E-value: | 5e-25 |
| Alignm gaps (pig, cow): | 0, 0 |
| Conread position: | 171-361 |
| Cow position: | chr6:45314029-45313841 (view UCSC Genome Browser custom track) |
| Alignm length: | 192 |
| Alignm identity: | 140 |
| Alignm E-value: | 7e-29 |
| Alignm gaps (pig, cow): | 81, 175 |
| Conread position: | 171-389 |
| Cow position: | chr6:49721105-49721324 (view UCSC Genome Browser custom track) |
| Alignm length: | 223 |
| Alignm identity: | 152 |
| Alignm E-value: | 4e-23 |
| Alignm gaps (pig, cow): | 37, 111 |
| Conread position: | 171-389 |
| Cow position: | chr6:63483858-63484074 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 151 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 51, 0 |
| Conread position: | 171-464 |
| Cow position: | chr6:1525791-1526081 (view UCSC Genome Browser custom track) |
| Alignm length: | 300 |
| Alignm identity: | 198 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 115, 62 |
| Conread position: | 171-475 |
| Cow position: | chr6:5340568-5340864 (view UCSC Genome Browser custom track) |
| Alignm length: | 305 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 79, 0 |
| Conread position: | 172-472 |
| Cow position: | chr6:11412747-11412446 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 208 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 25, 34 |
| Conread position: | 178-459 |
| Cow position: | chr6:35248382-35248665 (view UCSC Genome Browser custom track) |
| Alignm length: | 289 |
| Alignm identity: | 186 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 56, 187 |
Show alignments to all cow chromosomes.