Cow genome map


           Conread name:
           Ss1.1-rnmm34c_b15.5
        

               Conread position:
               3-385
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               249
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               67, 325
               

               Conread position:
               3-463
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               294
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               23, 15
               

               Conread position:
               5-362
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               246
               

               Alignm E-value:
               3e-30
               

               Alignm gaps (pig, cow):
               72, 235
               

               Conread position:
               8-287
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               72, 109
               

               Conread position:
               8-328
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-25
               

               Alignm gaps (pig, cow):
               158, 71
               

               Conread position:
               8-348
               

               Cow position:
               
               

               Alignm length:
               354
               

               Alignm identity:
               227
               

               Alignm E-value:
               1e-21
               

               Alignm gaps (pig, cow):
               98, 71
               

               Conread position:
               8-356
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               243
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               70, 237
               

               Conread position:
               8-465
               

               Cow position:
               
               

               Alignm length:
               486
               

               Alignm identity:
               317
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               70, 237
               

               Conread position:
               9-389
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               245
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               38, 44
               

               Conread position:
               11-389
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               255
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               67, 12
               

               Conread position:
               13-315
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               85, 44
               

               Conread position:
               14-391
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               260
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               66, 197
               

               Conread position:
               16-385
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               243
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               64, 42
               

               Conread position:
               18-349
               

               Cow position:
               
               

               Alignm length:
               338
               

               Alignm identity:
               226
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               145, 47
               

               Conread position:
               18-363
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               236
               

               Alignm E-value:
               6e-27
               

               Alignm gaps (pig, cow):
               62, 351
               

               Conread position:
               18-381
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               234
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               60, 102
               

               Conread position:
               18-389
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-30
               

               Alignm gaps (pig, cow):
               58, 30
               

               Conread position:
               25-343
               

               Cow position:
               
               

               Alignm length:
               325
               

               Alignm identity:
               208
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               60, 89
               

               Conread position:
               36-421
               

               Cow position:
               
               

               Alignm length:
               403
               

               Alignm identity:
               268
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               79-389
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               84, 33
               

               Conread position:
               79-389
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               200
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               79, 33
               

               Conread position:
               85-389
               

               Cow position:
               
               

               Alignm length:
               315
               

               Alignm identity:
               209
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               73, 29
               

               Conread position:
               90-334
               

               Cow position:
               
               

               Alignm length:
               251
               

               Alignm identity:
               169
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               70, 21
               

               Conread position:
               119-356
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               158
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               40, 70
               

               Conread position:
               121-313
               

               Cow position:
               
               

               Alignm length:
               200
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               37, 129
               

               Conread position:
               121-356
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               161
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               39, 119
               

               Conread position:
               121-359
               

               Cow position:
               
               

               Alignm length:
               246
               

               Alignm identity:
               177
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               42, 166
               

               Conread position:
               126-356
               

               Cow position:
               
               

               Alignm length:
               236
               

               Alignm identity:
               156
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               31, 90
               

               Conread position:
               127-391
               

               Cow position:
               
               

               Alignm length:
               270
               

               Alignm identity:
               172
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               31, 158
               

               Conread position:
               128-315
               

               Cow position:
               
               

               Alignm length:
               193
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               35, 0
               

               Conread position:
               136-391
               

               Cow position:
               
               

               Alignm length:
               262
               

               Alignm identity:
               179
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               27, 14
               

               Conread position:
               137-383
               

               Cow position:
               
               

               Alignm length:
               252
               

               Alignm identity:
               164
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               21, 74
               

               Conread position:
               144-325
               

               Cow position:
               
               

               Alignm length:
               191
               

               Alignm identity:
               134
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               23, 0
               

               Conread position:
               146-356
               

               Cow position:
               
               

               Alignm length:
               214
               

               Alignm identity:
               155
               

               Alignm E-value:
               3e-32
               

               Alignm gaps (pig, cow):
               28, 92
               

               Conread position:
               159-445
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               202
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               22, 132
               

               Conread position:
               164-356
               

               Cow position:
               
               

               Alignm length:
               195
               

               Alignm identity:
               136
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               180, 124
               

               Conread position:
               165-437
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               185
               

               Alignm E-value:
               9e-21
               

               Alignm gaps (pig, cow):
               57, 48
               

               Conread position:
               166-342
               

               Cow position:
               
               

               Alignm length:
               178
               

               Alignm identity:
               123
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               142, 0
               

               Conread position:
               171-355
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               127
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               124, 36
               

               Conread position:
               171-382
               

               Cow position:
               
               

               Alignm length:
               212
               

               Alignm identity:
               141
               

               Alignm E-value:
               3e-21
               

               Alignm gaps (pig, cow):
               17, 0
               

               Conread position:
               172-389
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               154
               

               Alignm E-value:
               5e-25
               

               Alignm gaps (pig, cow):
               40, 64
               

               Conread position:
               192-389
               

               Cow position:
               
               

               Alignm length:
               198
               

               Alignm identity:
               143
               

               Alignm E-value:
               1e-31
               

               Alignm gaps (pig, cow):
               116, 0
               

               Conread position:
               204-441
               

               Cow position:
               
               

               Alignm length:
               242
               

               Alignm identity:
               163
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               201, 136
               

               Conread position:
               210-367
               

               Cow position:
               
               

               Alignm length:
               158
               

               Alignm identity:
               115
               

               Alignm E-value:
               4e-23
               

               Alignm gaps (pig, cow):
               70, 0
               

               Conread position:
               213-465
               

               Cow position:
               
               

               Alignm length:
               259
               

               Alignm identity:
               178
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               17, 213
               

               Conread position:
               216-352
               

               Cow position:
               
               

               Alignm length:
               137
               

               Alignm identity:
               102
               

               Alignm E-value:
               1e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.