Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 8-305 |
| Cow position: | chr8:51975647-51975947 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 198 |
| Alignm E-value: | 6e-28 |
| Alignm gaps (pig, cow): | 48, 160 |
| Conread position: | 11-342 |
| Cow position: | chr8:29503172-29503502 (view UCSC Genome Browser custom track) |
| Alignm length: | 337 |
| Alignm identity: | 220 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 154, 67 |
| Conread position: | 13-315 |
| Cow position: | chr8:39635743-39636049 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 206 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 55, 109 |
| Conread position: | 13-327 |
| Cow position: | chr8:33767736-33768064 (view UCSC Genome Browser custom track) |
| Alignm length: | 331 |
| Alignm identity: | 215 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 67, 203 |
| Conread position: | 14-293 |
| Cow position: | chr8:36968412-36968121 (view UCSC Genome Browser custom track) |
| Alignm length: | 294 |
| Alignm identity: | 203 |
| Alignm E-value: | 9e-32 |
| Alignm gaps (pig, cow): | 93, 141 |
| Conread position: | 14-388 |
| Cow position: | chr8:31197358-31196962 (view UCSC Genome Browser custom track) |
| Alignm length: | 399 |
| Alignm identity: | 252 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 64, 324 |
| Conread position: | 16-356 |
| Cow position: | chr8:25135819-25136157 (view UCSC Genome Browser custom track) |
| Alignm length: | 350 |
| Alignm identity: | 225 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 142, 52 |
| Conread position: | 18-347 |
| Cow position: | chr8:6377099-6376755 (view UCSC Genome Browser custom track) |
| Alignm length: | 346 |
| Alignm identity: | 224 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 81, 193 |
| Conread position: | 18-348 |
| Cow position: | chr8:5390249-5389915 (view UCSC Genome Browser custom track) |
| Alignm length: | 343 |
| Alignm identity: | 229 |
| Alignm E-value: | 2e-30 |
| Alignm gaps (pig, cow): | 60, 26 |
| Conread position: | 31-389 |
| Cow position: | chr8:47183008-47182638 (view UCSC Genome Browser custom track) |
| Alignm length: | 377 |
| Alignm identity: | 243 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 46, 92 |
| Conread position: | 36-457 |
| Cow position: | chr8:39362567-39362983 (view UCSC Genome Browser custom track) |
| Alignm length: | 430 |
| Alignm identity: | 283 |
| Alignm E-value: | 5e-38 |
| Alignm gaps (pig, cow): | 76, 63 |
| Conread position: | 79-389 |
| Cow position: | chr8:20783890-20783579 (view UCSC Genome Browser custom track) |
| Alignm length: | 316 |
| Alignm identity: | 198 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 79, 33 |
| Conread position: | 79-389 |
| Cow position: | chr8:31208773-31208464 (view UCSC Genome Browser custom track) |
| Alignm length: | 319 |
| Alignm identity: | 212 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 74, 32 |
| Conread position: | 79-463 |
| Cow position: | chr8:31624761-31625158 (view UCSC Genome Browser custom track) |
| Alignm length: | 402 |
| Alignm identity: | 254 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 79, 45 |
| Conread position: | 82-383 |
| Cow position: | chr8:23256315-23256611 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 207 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 55, 16 |
| Conread position: | 83-390 |
| Cow position: | chr8:21093085-21092781 (view UCSC Genome Browser custom track) |
| Alignm length: | 314 |
| Alignm identity: | 209 |
| Alignm E-value: | 6e-29 |
| Alignm gaps (pig, cow): | 80, 28 |
| Conread position: | 84-389 |
| Cow position: | chr8:30135343-30135656 (view UCSC Genome Browser custom track) |
| Alignm length: | 317 |
| Alignm identity: | 202 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 76, 28 |
| Conread position: | 104-389 |
| Cow position: | chr8:29409140-29408837 (view UCSC Genome Browser custom track) |
| Alignm length: | 304 |
| Alignm identity: | 202 |
| Alignm E-value: | 5e-27 |
| Alignm gaps (pig, cow): | 11, 0 |
| Conread position: | 112-389 |
| Cow position: | chr8:42381427-42381146 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 183 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 51, 126 |
| Conread position: | 115-470 |
| Cow position: | chr8:24671477-24671129 (view UCSC Genome Browser custom track) |
| Alignm length: | 363 |
| Alignm identity: | 240 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 43, 71 |
| Conread position: | 121-310 |
| Cow position: | chr8:33094268-33094461 (view UCSC Genome Browser custom track) |
| Alignm length: | 195 |
| Alignm identity: | 135 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 42, 174 |
| Conread position: | 121-373 |
| Cow position: | chr8:5663581-5663326 (view UCSC Genome Browser custom track) |
| Alignm length: | 260 |
| Alignm identity: | 176 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 38, 81 |
| Conread position: | 121-373 |
| Cow position: | chr8:20870467-20870210 (view UCSC Genome Browser custom track) |
| Alignm length: | 258 |
| Alignm identity: | 170 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 44, 0 |
| Conread position: | 121-389 |
| Cow position: | chr8:23927808-23927545 (view UCSC Genome Browser custom track) |
| Alignm length: | 270 |
| Alignm identity: | 180 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 254, 44 |
| Conread position: | 121-389 |
| Cow position: | chr8:29271777-29271506 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 181 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 32, 145 |
| Conread position: | 121-415 |
| Cow position: | chr8:34815627-34815935 (view UCSC Genome Browser custom track) |
| Alignm length: | 311 |
| Alignm identity: | 219 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 46, 119 |
| Conread position: | 121-464 |
| Cow position: | chr8:42000389-42000049 (view UCSC Genome Browser custom track) |
| Alignm length: | 354 |
| Alignm identity: | 231 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 15, 45 |
| Conread position: | 123-347 |
| Cow position: | chr8:35415201-35415423 (view UCSC Genome Browser custom track) |
| Alignm length: | 226 |
| Alignm identity: | 153 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 93 |
| Conread position: | 123-368 |
| Cow position: | chr8:36709742-36709494 (view UCSC Genome Browser custom track) |
| Alignm length: | 251 |
| Alignm identity: | 168 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 43, 208 |
| Conread position: | 124-406 |
| Cow position: | chr8:15184513-15184240 (view UCSC Genome Browser custom track) |
| Alignm length: | 284 |
| Alignm identity: | 189 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 123, 42 |
| Conread position: | 140-388 |
| Cow position: | chr8:36856163-36855917 (view UCSC Genome Browser custom track) |
| Alignm length: | 252 |
| Alignm identity: | 166 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 145, 26 |
| Conread position: | 143-389 |
| Cow position: | chr8:10347071-10346823 (view UCSC Genome Browser custom track) |
| Alignm length: | 249 |
| Alignm identity: | 159 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 5, 0 |
| Conread position: | 157-417 |
| Cow position: | chr8:39576841-39577103 (view UCSC Genome Browser custom track) |
| Alignm length: | 263 |
| Alignm identity: | 168 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 9, 0 |
| Conread position: | 165-387 |
| Cow position: | chr8:4494171-4493949 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 121, 115 |
| Conread position: | 165-389 |
| Cow position: | chr8:6097032-6096811 (view UCSC Genome Browser custom track) |
| Alignm length: | 225 |
| Alignm identity: | 161 |
| Alignm E-value: | 4e-34 |
| Alignm gaps (pig, cow): | 37, 0 |
| Conread position: | 171-382 |
| Cow position: | chr8:30222029-30222236 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 95, 0 |
| Conread position: | 171-389 |
| Cow position: | chr8:8638302-8638086 (view UCSC Genome Browser custom track) |
| Alignm length: | 220 |
| Alignm identity: | 149 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 11, 17 |
| Conread position: | 171-389 |
| Cow position: | chr8:13214566-13214350 (view UCSC Genome Browser custom track) |
| Alignm length: | 219 |
| Alignm identity: | 145 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 52, 0 |
| Conread position: | 173-389 |
| Cow position: | chr8:54518575-54518783 (view UCSC Genome Browser custom track) |
| Alignm length: | 218 |
| Alignm identity: | 150 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 179, 46 |
| Conread position: | 174-383 |
| Cow position: | chr8:50507480-50507274 (view UCSC Genome Browser custom track) |
| Alignm length: | 210 |
| Alignm identity: | 141 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 6, 0 |
Show alignments to all cow chromosomes.