Cow genome map
| Conread name: | Ss1.1-rnmm34c_b15.5 |
| Conread position: | 8-237 |
| Cow position: | chr9:18718252-18718012 (view UCSC Genome Browser custom track) |
| Alignm length: | 244 |
| Alignm identity: | 167 |
| Alignm E-value: | 3e-21 |
| Alignm gaps (pig, cow): | 61, 113 |
| Conread position: | 8-312 |
| Cow position: | chr9:48260445-48260131 (view UCSC Genome Browser custom track) |
| Alignm length: | 318 |
| Alignm identity: | 216 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 92, 33 |
| Conread position: | 8-371 |
| Cow position: | chr9:35156493-35156139 (view UCSC Genome Browser custom track) |
| Alignm length: | 369 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 243, 28 |
| Conread position: | 17-360 |
| Cow position: | chr9:24406411-24406754 (view UCSC Genome Browser custom track) |
| Alignm length: | 351 |
| Alignm identity: | 221 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 148, 49 |
| Conread position: | 18-334 |
| Cow position: | chr9:33677169-33677487 (view UCSC Genome Browser custom track) |
| Alignm length: | 323 |
| Alignm identity: | 210 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 62, 129 |
| Conread position: | 31-389 |
| Cow position: | chr9:17335212-17335579 (view UCSC Genome Browser custom track) |
| Alignm length: | 376 |
| Alignm identity: | 244 |
| Alignm E-value: | 4e-25 |
| Alignm gaps (pig, cow): | 47, 58 |
| Conread position: | 79-389 |
| Cow position: | chr9:29373147-29373454 (view UCSC Genome Browser custom track) |
| Alignm length: | 313 |
| Alignm identity: | 205 |
| Alignm E-value: | 8e-31 |
| Alignm gaps (pig, cow): | 84, 30 |
| Conread position: | 89-389 |
| Cow position: | chr9:55396156-55395852 (view UCSC Genome Browser custom track) |
| Alignm length: | 310 |
| Alignm identity: | 202 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 14, 5 |
| Conread position: | 107-388 |
| Cow position: | chr9:59591059-59590779 (view UCSC Genome Browser custom track) |
| Alignm length: | 285 |
| Alignm identity: | 199 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 66, 20 |
| Conread position: | 107-391 |
| Cow position: | chr9:47943886-47944160 (view UCSC Genome Browser custom track) |
| Alignm length: | 287 |
| Alignm identity: | 195 |
| Alignm E-value: | 2e-29 |
| Alignm gaps (pig, cow): | 51, 14 |
| Conread position: | 112-392 |
| Cow position: | chr9:54787813-54788095 (view UCSC Genome Browser custom track) |
| Alignm length: | 288 |
| Alignm identity: | 188 |
| Alignm E-value: | 3e-22 |
| Alignm gaps (pig, cow): | 46, 128 |
| Conread position: | 120-389 |
| Cow position: | chr9:50770481-50770213 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 39, 149 |
| Conread position: | 121-389 |
| Cow position: | chr9:17034973-17035239 (view UCSC Genome Browser custom track) |
| Alignm length: | 275 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 37, 25 |
| Conread position: | 121-389 |
| Cow position: | chr9:45849170-45849443 (view UCSC Genome Browser custom track) |
| Alignm length: | 276 |
| Alignm identity: | 180 |
| Alignm E-value: | 1e-22 |
| Alignm gaps (pig, cow): | 45, 162 |
| Conread position: | 121-394 |
| Cow position: | chr9:23367759-23367489 (view UCSC Genome Browser custom track) |
| Alignm length: | 277 |
| Alignm identity: | 185 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 135, 44 |
| Conread position: | 122-356 |
| Cow position: | chr9:21735444-21735211 (view UCSC Genome Browser custom track) |
| Alignm length: | 241 |
| Alignm identity: | 164 |
| Alignm E-value: | 3e-23 |
| Alignm gaps (pig, cow): | 36, 96 |
| Conread position: | 122-389 |
| Cow position: | chr9:49636179-49636455 (view UCSC Genome Browser custom track) |
| Alignm length: | 278 |
| Alignm identity: | 185 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 36, 161 |
| Conread position: | 123-381 |
| Cow position: | chr9:7413758-7414018 (view UCSC Genome Browser custom track) |
| Alignm length: | 264 |
| Alignm identity: | 182 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 35, 161 |
| Conread position: | 131-360 |
| Cow position: | chr9:51760658-51760886 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 160 |
| Alignm E-value: | 5e-26 |
| Alignm gaps (pig, cow): | 94, 35 |
| Conread position: | 148-356 |
| Cow position: | chr9:13115894-13115686 (view UCSC Genome Browser custom track) |
| Alignm length: | 212 |
| Alignm identity: | 154 |
| Alignm E-value: | 3e-31 |
| Alignm gaps (pig, cow): | 6, 19 |
| Conread position: | 149-389 |
| Cow position: | chr9:6358076-6357832 (view UCSC Genome Browser custom track) |
| Alignm length: | 247 |
| Alignm identity: | 166 |
| Alignm E-value: | 4e-24 |
| Alignm gaps (pig, cow): | 17, 132 |
| Conread position: | 157-378 |
| Cow position: | chr9:9378021-9378236 (view UCSC Genome Browser custom track) |
| Alignm length: | 222 |
| Alignm identity: | 155 |
| Alignm E-value: | 2e-28 |
| Alignm gaps (pig, cow): | 72, 0 |
| Conread position: | 172-424 |
| Cow position: | chr9:13025973-13025723 (view UCSC Genome Browser custom track) |
| Alignm length: | 255 |
| Alignm identity: | 177 |
| Alignm E-value: | 1e-32 |
| Alignm gaps (pig, cow): | 75, 137 |
| Conread position: | 186-431 |
| Cow position: | chr9:9744160-9744395 (view UCSC Genome Browser custom track) |
| Alignm length: | 248 |
| Alignm identity: | 173 |
| Alignm E-value: | 2e-26 |
| Alignm gaps (pig, cow): | 88, 81 |
| Conread position: | 186-436 |
| Cow position: | chr9:13374156-13373906 (view UCSC Genome Browser custom track) |
| Alignm length: | 257 |
| Alignm identity: | 171 |
| Alignm E-value: | 9e-22 |
| Alignm gaps (pig, cow): | 33, 26 |
| Conread position: | 212-422 |
| Cow position: | chr9:31128099-31128302 (view UCSC Genome Browser custom track) |
| Alignm length: | 211 |
| Alignm identity: | 147 |
| Alignm E-value: | 1e-25 |
| Alignm gaps (pig, cow): | 120, 0 |
| Conread position: | 223-453 |
| Cow position: | chr9:18717695-18717471 (view UCSC Genome Browser custom track) |
| Alignm length: | 233 |
| Alignm identity: | 159 |
| Alignm E-value: | 1e-23 |
| Alignm gaps (pig, cow): | 179, 10 |
Show alignments to all cow chromosomes.