Cow genome map


           Conread name:
           Ss1.1-rnmm34c_b15.5
        

               Conread position:
               4-389
               

               Cow position:
               
               

               Alignm length:
               407
               

               Alignm identity:
               258
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               16, 32
               

               Conread position:
               7-419
               

               Cow position:
               
               

               Alignm length:
               427
               

               Alignm identity:
               279
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               70, 14
               

               Conread position:
               7-445
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               234
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               382, 71
               

               Conread position:
               8-281
               

               Cow position:
               
               

               Alignm length:
               284
               

               Alignm identity:
               189
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               89, 0
               

               Conread position:
               8-315
               

               Cow position:
               
               

               Alignm length:
               322
               

               Alignm identity:
               220
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               57, 88
               

               Conread position:
               8-355
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               78, 94
               

               Conread position:
               8-359
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               248
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               30, 118
               

               Conread position:
               8-382
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               262
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               70, 331
               

               Conread position:
               8-383
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               265
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               87, 140
               

               Conread position:
               8-386
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               43, 51
               

               Conread position:
               8-387
               

               Cow position:
               
               

               Alignm length:
               406
               

               Alignm identity:
               279
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               70, 41
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               398
               

               Alignm identity:
               248
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               43, 95
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               402
               

               Alignm identity:
               252
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               72, 122
               

               Conread position:
               8-448
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               288
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               158, 39
               

               Conread position:
               8-448
               

               Cow position:
               
               

               Alignm length:
               449
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               99, 45
               

               Conread position:
               8-454
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               313
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               70, 43
               

               Conread position:
               11-316
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               205
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               46, 104
               

               Conread position:
               11-356
               

               Cow position:
               
               

               Alignm length:
               353
               

               Alignm identity:
               226
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               87, 67
               

               Conread position:
               11-383
               

               Cow position:
               
               

               Alignm length:
               383
               

               Alignm identity:
               237
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               75, 118
               

               Conread position:
               13-360
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               67, 27
               

               Conread position:
               13-360
               

               Cow position:
               
               

               Alignm length:
               356
               

               Alignm identity:
               230
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               22, 104
               

               Conread position:
               13-419
               

               Cow position:
               
               

               Alignm length:
               422
               

               Alignm identity:
               268
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               65, 22
               

               Conread position:
               14-445
               

               Cow position:
               
               

               Alignm length:
               439
               

               Alignm identity:
               283
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               64, 31
               

               Conread position:
               28-356
               

               Cow position:
               
               

               Alignm length:
               340
               

               Alignm identity:
               220
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               50, 193
               

               Conread position:
               54-479
               

               Cow position:
               
               

               Alignm length:
               446
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               24, 151
               

               Conread position:
               79-305
               

               Cow position:
               
               

               Alignm length:
               232
               

               Alignm identity:
               162
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               80, 32
               

               Conread position:
               79-340
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               188
               

               Alignm E-value:
               3e-34
               

               Alignm gaps (pig, cow):
               84, 21
               

               Conread position:
               79-380
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               195
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               84, 30
               

               Conread position:
               79-383
               

               Cow position:
               
               

               Alignm length:
               312
               

               Alignm identity:
               204
               

               Alignm E-value:
               5e-29
               

               Alignm gaps (pig, cow):
               26, 67
               

               Conread position:
               79-423
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               235
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               79, 21
               

               Conread position:
               82-389
               

               Cow position:
               
               

               Alignm length:
               309
               

               Alignm identity:
               199
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               237, 30
               

               Conread position:
               82-391
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               78, 30
               

               Conread position:
               83-389
               

               Cow position:
               
               

               Alignm length:
               313
               

               Alignm identity:
               211
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               75, 27
               

               Conread position:
               83-448
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               251
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               80, 34
               

               Conread position:
               87-356
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               182
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               71, 16
               

               Conread position:
               89-391
               

               Cow position:
               
               

               Alignm length:
               314
               

               Alignm identity:
               210
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               74, 24
               

               Conread position:
               91-367
               

               Cow position:
               
               

               Alignm length:
               278
               

               Alignm identity:
               180
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               188, 21
               

               Conread position:
               104-392
               

               Cow position:
               
               

               Alignm length:
               293
               

               Alignm identity:
               188
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               8, 42
               

               Conread position:
               113-310
               

               Cow position:
               
               

               Alignm length:
               203
               

               Alignm identity:
               139
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               47, 0
               

               Conread position:
               120-356
               

               Cow position:
               
               

               Alignm length:
               243
               

               Alignm identity:
               166
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               43, 123
               

               Conread position:
               121-348
               

               Cow position:
               
               

               Alignm length:
               234
               

               Alignm identity:
               160
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               42, 114
               

               Conread position:
               121-356
               

               Cow position:
               
               

               Alignm length:
               241
               

               Alignm identity:
               167
               

               Alignm E-value:
               6e-31
               

               Alignm gaps (pig, cow):
               44, 9
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               181
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               47, 142
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               194
               

               Alignm E-value:
               3e-36
               

               Alignm gaps (pig, cow):
               44, 163
               

               Conread position:
               121-389
               

               Cow position:
               
               

               Alignm length:
               276
               

               Alignm identity:
               182
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               37, 165
               

               Conread position:
               122-453
               

               Cow position:
               
               

               Alignm length:
               347
               

               Alignm identity:
               221
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               43, 90
               

               Conread position:
               123-389
               

               Cow position:
               
               

               Alignm length:
               272
               

               Alignm identity:
               195
               

               Alignm E-value:
               5.99994e-41
               

               Alignm gaps (pig, cow):
               40, 89
               

               Conread position:
               123-389
               

               Cow position:
               
               

               Alignm length:
               267
               

               Alignm identity:
               175
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               8, 0
               

               Conread position:
               124-448
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               229
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               50, 39
               

               Conread position:
               126-389
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               175
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               163, 39
               

               Conread position:
               137-442
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               210
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               24, 81
               

               Conread position:
               139-355
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               157
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               22, 101
               

               Conread position:
               142-321
               

               Cow position:
               
               

               Alignm length:
               185
               

               Alignm identity:
               136
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               16, 5
               

               Conread position:
               144-388
               

               Cow position:
               
               

               Alignm length:
               248
               

               Alignm identity:
               170
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               19, 72
               

               Conread position:
               150-448
               

               Cow position:
               
               

               Alignm length:
               317
               

               Alignm identity:
               213
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               13, 229
               

               Conread position:
               162-325
               

               Cow position:
               
               

               Alignm length:
               164
               

               Alignm identity:
               119
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               32, 0
               

               Conread position:
               162-392
               

               Cow position:
               
               

               Alignm length:
               238
               

               Alignm identity:
               171
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               10, 60
               

               Conread position:
               164-389
               

               Cow position:
               
               

               Alignm length:
               228
               

               Alignm identity:
               152
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               105, 21
               

               Conread position:
               167-422
               

               Cow position:
               
               

               Alignm length:
               258
               

               Alignm identity:
               172
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               123, 113
               

               Conread position:
               171-356
               

               Cow position:
               
               

               Alignm length:
               186
               

               Alignm identity:
               129
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               82, 0
               

               Conread position:
               171-389
               

               Cow position:
               
               

               Alignm length:
               226
               

               Alignm identity:
               153
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               165, 0
               

               Conread position:
               171-389
               

               Cow position:
               
               

               Alignm length:
               219
               

               Alignm identity:
               144
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               117, 0
               

               Conread position:
               171-393
               

               Cow position:
               
               

               Alignm length:
               225
               

               Alignm identity:
               156
               

               Alignm E-value:
               8e-23
               

               Alignm gaps (pig, cow):
               48, 97
               

               Conread position:
               171-455
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               197
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               198, 127
               

               Conread position:
               172-417
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               163
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               58, 46
               

               Conread position:
               173-453
               

               Cow position:
               
               

               Alignm length:
               283
               

               Alignm identity:
               185
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               117, 44
               

               Conread position:
               180-360
               

               Cow position:
               
               

               Alignm length:
               181
               

               Alignm identity:
               127
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               180-384
               

               Cow position:
               
               

               Alignm length:
               205
               

               Alignm identity:
               147
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               39, 0
               

               Conread position:
               180-424
               

               Cow position:
               
               

               Alignm length:
               250
               

               Alignm identity:
               166
               

               Alignm E-value:
               6e-21
               

               Alignm gaps (pig, cow):
               63, 17
               

               Conread position:
               197-356
               

               Cow position:
               
               

               Alignm length:
               160
               

               Alignm identity:
               114
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-360
               

               Cow position:
               
               

               Alignm length:
               138
               

               Alignm identity:
               107
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               0, 0
               

               Conread position:
               223-387
               

               Cow position:
               
               

               Alignm length:
               165
               

               Alignm identity:
               115
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               0, 0
               
Show alignments to all cow chromosomes.