Cow genome map


           Conread name:
           Ss1.1-rova002_o20.5
        

               Conread position:
               5-350
               

               Cow position:
               
               

               Alignm length:
               352
               

               Alignm identity:
               221
               

               Alignm E-value:
               3e-22
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               5-377
               

               Cow position:
               
               

               Alignm length:
               375
               

               Alignm identity:
               227
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               71, 65
               

               Conread position:
               5-387
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               241
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               73, 60
               

               Conread position:
               5-388
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               256
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               67, 48
               

               Conread position:
               5-388
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               236
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               220, 240
               

               Conread position:
               5-388
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               246
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               64, 53
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               246
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               53, 68
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               393
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               68, 50
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               256
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               243
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               247
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               64, 55
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               235
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               150, 137
               

               Conread position:
               5-394
               

               Cow position:
               
               

               Alignm length:
               400
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               49, 75
               

               Conread position:
               5-437
               

               Cow position:
               
               

               Alignm length:
               440
               

               Alignm identity:
               271
               

               Alignm E-value:
               6e-28
               

               Alignm gaps (pig, cow):
               138, 128
               

               Conread position:
               5-442
               

               Cow position:
               
               

               Alignm length:
               445
               

               Alignm identity:
               279
               

               Alignm E-value:
               1e-32
               

               Alignm gaps (pig, cow):
               51, 71
               

               Conread position:
               5-447
               

               Cow position:
               
               

               Alignm length:
               451
               

               Alignm identity:
               285
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               52, 62
               

               Conread position:
               5-516
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               330
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               5-525
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               325
               

               Alignm E-value:
               6e-29
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               5-525
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               307
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               5-525
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               326
               

               Alignm E-value:
               6e-39
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               5-530
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               332
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               5-531
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               323
               

               Alignm E-value:
               4e-24
               

               Alignm gaps (pig, cow):
               44, 38
               

               Conread position:
               5-531
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               55, 83
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 64
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               326
               

               Alignm E-value:
               4e-25
               

               Alignm gaps (pig, cow):
               53, 65
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               340
               

               Alignm E-value:
               7.00005e-41
               

               Alignm gaps (pig, cow):
               58, 84
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               343
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               53, 81
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               324
               

               Alignm E-value:
               2e-26
               

               Alignm gaps (pig, cow):
               54, 61
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               332
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               62, 75
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 66
               

               Conread position:
               5-535
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               345
               

               Alignm E-value:
               8.00001e-42
               

               Alignm gaps (pig, cow):
               57, 72
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               347
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               351
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               47, 54
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               346
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               5-582
               

               Cow position:
               
               

               Alignm length:
               591
               

               Alignm identity:
               363
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               57, 72
               

               Conread position:
               6-532
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               318
               

               Alignm E-value:
               5e-26
               

               Alignm gaps (pig, cow):
               12, 149
               

               Conread position:
               7-389
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               244
               

               Alignm E-value:
               5e-27
               

               Alignm gaps (pig, cow):
               51, 66
               

               Conread position:
               7-478
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               131, 118
               

               Conread position:
               7-532
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               334
               

               Alignm E-value:
               2e-37
               

               Alignm gaps (pig, cow):
               49, 62
               

               Conread position:
               7-534
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 66
               

               Conread position:
               7-534
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 60
               

               Conread position:
               7-534
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               331
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               56, 64
               

               Conread position:
               7-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               7-549
               

               Cow position:
               
               

               Alignm length:
               550
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 153
               

               Conread position:
               8-389
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               55, 65
               

               Conread position:
               8-532
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               334
               

               Alignm E-value:
               5e-37
               

               Alignm gaps (pig, cow):
               69, 48
               

               Conread position:
               8-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 68
               

               Conread position:
               12-532
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               325
               

               Alignm E-value:
               4e-34
               

               Alignm gaps (pig, cow):
               61, 65
               

               Conread position:
               13-437
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               254
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               58, 45
               

               Conread position:
               13-532
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               322
               

               Alignm E-value:
               3e-33
               

               Alignm gaps (pig, cow):
               48, 58
               

               Conread position:
               13-549
               

               Cow position:
               
               

               Alignm length:
               546
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 60
               

               Conread position:
               13-588
               

               Cow position:
               
               

               Alignm length:
               589
               

               Alignm identity:
               362
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               46, 75
               

               Conread position:
               14-532
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               328
               

               Alignm E-value:
               5e-38
               

               Alignm gaps (pig, cow):
               44, 74
               

               Conread position:
               15-537
               

               Cow position:
               
               

               Alignm length:
               532
               

               Alignm identity:
               337
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               16-534
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 38
               

               Conread position:
               61-549
               

               Cow position:
               
               

               Alignm length:
               499
               

               Alignm identity:
               318
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               85, 13
               

               Conread position:
               76-526
               

               Cow position:
               
               

               Alignm length:
               460
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-22
               

               Alignm gaps (pig, cow):
               77, 66
               

               Conread position:
               82-549
               

               Cow position:
               
               

               Alignm length:
               481
               

               Alignm identity:
               308
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               48, 78
               

               Conread position:
               87-551
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               294
               

               Alignm E-value:
               3e-31
               

               Alignm gaps (pig, cow):
               136, 51
               

               Conread position:
               95-387
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               186
               

               Alignm E-value:
               1e-23
               

               Alignm gaps (pig, cow):
               51, 65
               

               Conread position:
               97-531
               

               Cow position:
               
               

               Alignm length:
               443
               

               Alignm identity:
               266
               

               Alignm E-value:
               8e-21
               

               Alignm gaps (pig, cow):
               49, 76
               
Show alignments to all cow chromosomes.