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Cow genome map

           
Conread name:
           
Ss1.1-rova002_o20.5
        

               
Conread position:
               
1-249
               

               
Cow position:
               
chr18:51765168-51764916 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
256
               

               
Alignm identity:
               
173
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
5, 67
               

               
Conread position:
               
1-281
               

               
Cow position:
               
chr18:43174778-43174497 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
284
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
5, 74
               

               
Conread position:
               
1-383
               

               
Cow position:
               
chr18:55523465-55523849 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
20, 74
               

               
Conread position:
               
1-388
               

               
Cow position:
               
chr18:56128111-56128499 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
1-425
               

               
Cow position:
               
chr18:40306915-40307340 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 76
               

               
Conread position:
               
1-430
               

               
Cow position:
               
chr18:55066785-55066354 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
19, 56
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:53586842-53586308 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
19, 162
               

               
Conread position:
               
1-531
               

               
Cow position:
               
chr18:55018289-55018825 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
19, 71
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr18:42837778-42837242 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 58
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr18:42960141-42959614 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
5, 71
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr18:44240083-44240619 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
1-534
               

               
Cow position:
               
chr18:54967024-54967561 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
23, 71
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr18:53635886-53635346 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
5, 257
               

               
Conread position:
               
1-538
               

               
Cow position:
               
chr18:56128279-56128819 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
546
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
5, 132
               

               
Conread position:
               
1-549
               

               
Cow position:
               
chr18:42960225-42959681 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
562
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
5, 69
               

               
Conread position:
               
1-568
               

               
Cow position:
               
chr18:40306579-40307153 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
583
               

               
Alignm identity:
               
389
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
5, 56
               

               
Conread position:
               
2-303
               

               
Cow position:
               
chr18:53560422-53560723 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
200
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
74, 68
               

               
Conread position:
               
2-524
               

               
Cow position:
               
chr18:50099471-50099995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
65, 52
               

               
Conread position:
               
2-534
               

               
Cow position:
               
chr18:41198155-41198689 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 54
               

               
Conread position:
               
2-534
               

               
Cow position:
               
chr18:52012450-52011917 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
63, 39
               

               
Conread position:
               
3-389
               

               
Cow position:
               
chr18:14454027-14453641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
60, 74
               

               
Conread position:
               
3-438
               

               
Cow position:
               
chr18:40086103-40085675 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
52, 71
               

               
Conread position:
               
3-449
               

               
Cow position:
               
chr18:56248243-56247810 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
451
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
146, 19
               

               
Conread position:
               
3-533
               

               
Cow position:
               
chr18:50049062-50048530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
320
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
64, 73
               

               
Conread position:
               
3-534
               

               
Cow position:
               
chr18:53509229-53509764 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
20, 52
               

               
Conread position:
               
3-537
               

               
Cow position:
               
chr18:49022723-49023259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
62, 53
               

               
Conread position:
               
3-549
               

               
Cow position:
               
chr18:44154374-44153831 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
126, 144
               

               
Conread position:
               
4-534
               

               
Cow position:
               
chr18:44398445-44397913 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
25, 18
               

               
Conread position:
               
5-187
               

               
Cow position:
               
chr18:44184135-44183953 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
186
               

               
Alignm identity:
               
131
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
50, 62
               

               
Conread position:
               
5-198
               

               
Cow position:
               
chr18:43174689-43174496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
195
               

               
Alignm identity:
               
132
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
51, 71
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr18:14453125-14452907 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
221
               

               
Alignm identity:
               
159
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-223
               

               
Cow position:
               
chr18:42959641-42959423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
222
               

               
Alignm identity:
               
157
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
53, 68
               

               
Conread position:
               
5-283
               

               
Cow position:
               
chr18:43168291-43168567 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
283
               

               
Alignm identity:
               
183
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr18:49032379-49032091 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
192
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
71, 65
               

               
Conread position:
               
5-293
               

               
Cow position:
               
chr18:53509737-53510023 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
291
               

               
Alignm identity:
               
184
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
55, 72
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr18:42744134-42743840 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
58, 66
               

               
Conread position:
               
5-299
               

               
Cow position:
               
chr18:43119824-43119530 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
299
               

               
Alignm identity:
               
212
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
5-300
               

               
Cow position:
               
chr18:52011860-52011565 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
300
               

               
Alignm identity:
               
201
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr18:50048640-50048336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
309
               

               
Alignm identity:
               
209
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
58, 70
               

               
Conread position:
               
5-309
               

               
Cow position:
               
chr18:50083949-50084253 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
140, 155
               

               
Conread position:
               
5-355
               

               
Cow position:
               
chr18:50058788-50058440 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
353
               

               
Alignm identity:
               
223
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
242, 248
               

               
Conread position:
               
5-356
               

               
Cow position:
               
chr18:50271792-50272143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
356
               

               
Alignm identity:
               
230
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
70, 65
               

               
Conread position:
               
5-361
               

               
Cow position:
               
chr18:56329184-56328828 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
360
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
60, 71
               

               
Conread position:
               
5-364
               

               
Cow position:
               
chr18:56247404-56247051 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
58, 31
               

               
Conread position:
               
5-372
               

               
Cow position:
               
chr18:14453689-14453319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
372
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
225, 235
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr18:42674822-42674450 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
55, 51
               

               
Conread position:
               
5-377
               

               
Cow position:
               
chr18:50849002-50849374 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-382
               

               
Cow position:
               
chr18:50099726-50100103 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr18:33093027-33092646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
71, 66
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr18:50281837-50282218 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr18:54967198-54967578 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 47
               

               
Conread position:
               
5-386
               

               
Cow position:
               
chr18:56316296-56316676 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
392
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
69, 49
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr18:50021817-50021432 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
58, 242
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr18:50083865-50084247 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
155, 137
               

               
Conread position:
               
5-387
               

               
Cow position:
               
chr18:50084033-50084417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
63, 46
               

               
Conread position:
               
5-388
               

               
Cow position:
               
chr18:53610304-53609921 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:1418165-1418549 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
264
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 70
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:33064019-33063635 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:42827567-42827956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2e-36
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:43168123-43168507 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:53498048-53498438 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
393
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
219, 333
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:53610136-53609752 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
141, 156
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:56329352-56328968 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
256
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:56329604-56329220 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
58, 84
               

               
Conread position:
               
5-389
               

               
Cow position:
               
chr18:56494091-56494475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
5-390
               

               
Cow position:
               
chr18:40075186-40075571 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
389
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr18:53525771-53526158 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
394
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
5-392
               

               
Cow position:
               
chr18:55523891-55524278 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
391
               

               
Alignm identity:
               
233
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
299, 291
               

               
Conread position:
               
5-396
               

               
Cow position:
               
chr18:43048733-43048342 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
5-425
               

               
Cow position:
               
chr18:49032547-49032127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
72, 60
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr18:50246408-50246838 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
71, 51
               

               
Conread position:
               
5-434
               

               
Cow position:
               
chr18:53509485-53509915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
436
               

               
Alignm identity:
               
263
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
5-437
               

               
Cow position:
               
chr18:42827483-42827915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
47, 62
               

               
Conread position:
               
5-438
               

               
Cow position:
               
chr18:50295435-50295868 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
439
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
224, 231
               

               
Conread position:
               
5-444
               

               
Cow position:
               
chr18:56128704-56129142 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
145, 128
               

               
Conread position:
               
5-448
               

               
Cow position:
               
chr18:50022156-50021707 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
56, 243
               

               
Conread position:
               
5-449
               

               
Cow position:
               
chr18:51400779-51401223 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
453
               

               
Alignm identity:
               
292
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
56, 64
               

               
Conread position:
               
5-469
               

               
Cow position:
               
chr18:53635461-53634996 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
141, 156
               

               
Conread position:
               
5-470
               

               
Cow position:
               
chr18:40306500-40306967 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
474
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
64, 47
               

               
Conread position:
               
5-471
               

               
Cow position:
               
chr18:53525939-53526407 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
475
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
68, 51
               

               
Conread position:
               
5-477
               

               
Cow position:
               
chr18:42837605-42837132 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
5-516
               

               
Cow position:
               
chr18:40074934-40075447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-517
               

               
Cow position:
               
chr18:50848081-50848592 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
519
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
5-518
               

               
Cow position:
               
chr18:42791715-42792230 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
8.00001e-41
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
5-523
               

               
Cow position:
               
chr18:56329520-56329001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
5-524
               

               
Cow position:
               
chr18:55067031-55066511 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
68, 50
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr18:50099222-50099744 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
48, 64
               

               
Conread position:
               
5-525
               

               
Cow position:
               
chr18:50848582-50849104 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
69, 65
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:40324721-40324193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
337
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
62, 75
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:49032967-49032439 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
62, 72
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:50059208-50058680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
139, 155
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:53509317-53509845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:53559753-53560281 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
72, 49
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:53559837-53560365 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
314
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
230, 239
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:53586668-53586140 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:53635629-53635101 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:54979807-54980335 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
72, 51
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:54992731-54993259 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
63, 53
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:54993403-54993929 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
47, 89
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:55017791-55018319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:55523639-55524167 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
125, 139
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:56128536-56129064 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
73, 65
               

               
Conread position:
               
5-531
               

               
Cow position:
               
chr18:56329940-56329412 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
58, 52
               

               
Conread position:
               
5-532
               

               
Cow position:
               
chr18:42791967-42792496 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
5-532
               

               
Cow position:
               
chr18:49033303-49032774 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-532
               

               
Cow position:
               
chr18:51400527-51401056 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
54, 62
               

               
Conread position:
               
5-533
               

               
Cow position:
               
chr18:33064859-33064329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 54
               

               
Conread position:
               
5-533
               

               
Cow position:
               
chr18:53498216-53498749 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
54, 165
               

               
Conread position:
               
5-533
               

               
Cow position:
               
chr18:54979471-54980001 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
105, 54
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:33064355-33063824 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
543
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 66
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:33064607-33064076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:41197990-41198521 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
57, 71
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:42674990-42674459 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:42985229-42984698 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
349
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
58, 71
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:49032883-49032352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:49033135-49032604 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
69, 50
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:51789394-51788863 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-34
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:51839398-51838867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
133, 127
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:54980059-54980588 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
49, 89
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:55523555-55524086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
138, 123
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:55523723-55524254 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
58, 72
               

               
Conread position:
               
5-534
               

               
Cow position:
               
chr18:56329772-56329241 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
333
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
58, 68
               

               
Conread position:
               
5-537
               

               
Cow position:
               
chr18:56248166-56247620 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
15, 73
               

               
Conread position:
               
5-538
               

               
Cow position:
               
chr18:43175529-43174994 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 67
               

               
Conread position:
               
5-538
               

               
Cow position:
               
chr18:53586416-53585881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
5-540
               

               
Cow position:
               
chr18:50271624-50272160 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
542
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 49
               

               
Conread position:
               
5-540
               

               
Cow position:
               
chr18:52012028-52011491 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
72, 65
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr18:40086435-40085897 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
557
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
50, 59
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr18:42675158-42674610 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 71
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr18:42744722-42744174 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
148, 126
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr18:51368271-51367724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
53, 72
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr18:52012364-52011816 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
5e-36
               

               
Alignm gaps (pig, cow):
               
143, 155
               

               
Conread position:
               
5-549
               

               
Cow position:
               
chr18:56247734-56247194 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
358
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
61, 71
               

               
Conread position:
               
5-552
               

               
Cow position:
               
chr18:50059544-50058992 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
559
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
66, 51
               

               
Conread position:
               
5-556
               

               
Cow position:
               
chr18:33064271-33063715 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
227, 219
               

               
Conread position:
               
5-562
               

               
Cow position:
               
chr18:43175445-43174882 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
569
               

               
Alignm identity:
               
369
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 71
               

               
Conread position:
               
5-582
               

               
Cow position:
               
chr18:41949269-41948687 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
593
               

               
Alignm identity:
               
381
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 59
               

               
Conread position:
               
5-587
               

               
Cow position:
               
chr18:43175109-43174522 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
597
               

               
Alignm identity:
               
397
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 49
               

               
Conread position:
               
5-587
               

               
Cow position:
               
chr18:50246156-50246743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
594
               

               
Alignm identity:
               
372
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 71
               

               
Conread position:
               
5-587
               

               
Cow position:
               
chr18:52447271-52447858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
596
               

               
Alignm identity:
               
377
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
72, 53
               

               
Conread position:
               
6-534
               

               
Cow position:
               
chr18:43167618-43168150 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
14, 65
               

               
Conread position:
               
7-224
               

               
Cow position:
               
chr18:44397770-44397553 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr18:40085939-40085649 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
294
               

               
Alignm identity:
               
191
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
136, 126
               

               
Conread position:
               
7-296
               

               
Cow position:
               
chr18:42674736-42674447 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
293
               

               
Alignm identity:
               
207
               

               
Alignm E-value:
               
1.00053e-42
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
7-355
               

               
Cow position:
               
chr18:41198412-41198760 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
352
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
51, 62
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:50099980-50100329 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
222
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
49, 69
               

               
Conread position:
               
7-356
               

               
Cow position:
               
chr18:51874305-51874654 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
355
               

               
Alignm identity:
               
225
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
54, 73
               

               
Conread position:
               
7-362
               

               
Cow position:
               
chr18:14453207-14452852 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
362
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
70, 64
               

               
Conread position:
               
7-362
               

               
Cow position:
               
chr18:42792557-42792912 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
359
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-374
               

               
Cow position:
               
chr18:52428638-52429004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
243
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
7-374
               

               
Cow position:
               
chr18:52433819-52434185 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
47, 56
               

               
Conread position:
               
7-377
               

               
Cow position:
               
chr18:44253319-44252950 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
375
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-386
               

               
Cow position:
               
chr18:42959798-42959428 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
126, 52
               

               
Conread position:
               
7-387
               

               
Cow position:
               
chr18:50099812-50100192 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
385
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
138, 148
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr18:42792389-42792770 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
247
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
139, 126
               

               
Conread position:
               
7-388
               

               
Cow position:
               
chr18:51368185-51367805 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
170, 152
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr18:43168041-43168423 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
254
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
7-389
               

               
Cow position:
               
chr18:44397938-44397556 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
387
               

               
Alignm identity:
               
257
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-390
               

               
Cow position:
               
chr18:43022402-43022019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
388
               

               
Alignm identity:
               
261
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
7-409
               

               
Cow position:
               
chr18:44153632-44153233 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
255
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
55, 40
               

               
Conread position:
               
7-438
               

               
Cow position:
               
chr18:51874060-51874484 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
438
               

               
Alignm identity:
               
279
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
49, 59
               

               
Conread position:
               
7-448
               

               
Cow position:
               
chr18:43174939-43174498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
7-465
               

               
Cow position:
               
chr18:44153873-44153425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
464
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
7-465
               

               
Cow position:
               
chr18:50083783-50084243 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
304
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 61
               

               
Conread position:
               
7-471
               

               
Cow position:
               
chr18:42984975-42984509 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
476
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 70
               

               
Conread position:
               
7-512
               

               
Cow position:
               
chr18:51765413-51764906 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
517
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
56, 73
               

               
Conread position:
               
7-518
               

               
Cow position:
               
chr18:44184469-44183956 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
523
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-524
               

               
Cow position:
               
chr18:41948847-41948328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-525
               

               
Cow position:
               
chr18:52447861-52448382 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
7-531
               

               
Cow position:
               
chr18:1418083-1418609 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
7-531
               

               
Cow position:
               
chr18:42790961-42791487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
54, 65
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:41197824-41198352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
360
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:42791213-42791741 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
330
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
55, 69
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:42985395-42984867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 66
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:44253726-44253211 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:51752170-51751642 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
323
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
50, 70
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:52428134-52428662 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:52428302-52428830 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 69
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:52433315-52433843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
344
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
7-533
               

               
Cow position:
               
chr18:52433483-52434011 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
51, 69
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:40324551-40324022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
71, 63
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:41949351-41948822 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:43022990-43022461 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
350
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 52
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:43093421-43092892 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
69, 63
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:43093997-43093480 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
54, 70
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:43120242-43119713 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
341
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
48, 69
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:43167789-43168318 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
313
               

               
Alignm E-value:
               
3e-21
               

               
Alignm gaps (pig, cow):
               
54, 68
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:44184805-44184276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 60
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:44398190-44397661 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 69
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:51765917-51765388 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
2e-38
               

               
Alignm gaps (pig, cow):
               
56, 67
               

               
Conread position:
               
7-534
               

               
Cow position:
               
chr18:51812551-51812022 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
535
               

               
Alignm identity:
               
335
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
81, 49
               

               
Conread position:
               
7-535
               

               
Cow position:
               
chr18:51789560-51789030 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-535
               

               
Cow position:
               
chr18:52447525-52448055 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
60, 69
               

               
Conread position:
               
7-538
               

               
Cow position:
               
chr18:40306334-40306867 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
59, 68
               

               
Conread position:
               
7-543
               

               
Cow position:
               
chr18:44240258-44240796 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
7-543
               

               
Cow position:
               
chr18:44398106-44397568 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
544
               

               
Alignm identity:
               
356
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
70, 51
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:40086939-40086391 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
63, 69
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:42959966-42959429 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
558
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:43022570-43022024 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
367
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 70
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:43093673-43093127 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:43119990-43119445 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
555
               

               
Alignm identity:
               
368
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 58
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:44154457-44153909 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
554
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 156
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:52447609-52448155 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
357
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 70
               

               
Conread position:
               
7-549
               

               
Cow position:
               
chr18:52447693-52448239 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
553
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-552
               

               
Cow position:
               
chr18:41197656-41198206 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
560
               

               
Alignm identity:
               
376
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
7-553
               

               
Cow position:
               
chr18:42960302-42959751 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
563
               

               
Alignm identity:
               
362
               

               
Alignm E-value:
               
4.2039e-45
               

               
Alignm gaps (pig, cow):
               
45, 73
               

               
Conread position:
               
7-571
               

               
Cow position:
               
chr18:51812719-51812149 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
579
               

               
Alignm identity:
               
365
               

               
Alignm E-value:
               
9.94922e-44
               

               
Alignm gaps (pig, cow):
               
56, 69
               

               
Conread position:
               
7-581
               

               
Cow position:
               
chr18:41197908-41198487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
383
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
52, 69
               

               
Conread position:
               
8-387
               

               
Cow position:
               
chr18:50848165-50848544 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
4e-24
               

               
Alignm gaps (pig, cow):
               
132, 145
               

               
Conread position:
               
8-388
               

               
Cow position:
               
chr18:53636046-53635666 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
138, 153
               

               
Conread position:
               
8-389
               

               
Cow position:
               
chr18:44154117-44153743 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
259
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
77, 62
               

               
Conread position:
               
8-442
               

               
Cow position:
               
chr18:14453290-14452856 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
49, 76
               

               
Conread position:
               
8-465
               

               
Cow position:
               
chr18:42827402-42827861 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
466
               

               
Alignm identity:
               
300
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
67, 62
               

               
Conread position:
               
8-519
               

               
Cow position:
               
chr18:51368520-51368007 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
318
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
8-533
               

               
Cow position:
               
chr18:41197573-41198100 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:43175763-43175246 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
539
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
138, 45
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:52427799-52428331 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
537
               

               
Alignm identity:
               
334
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:52433148-52433680 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
331
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
69, 57
               

               
Conread position:
               
8-538
               

               
Cow position:
               
chr18:56316047-56316579 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
236, 218
               

               
Conread position:
               
8-544
               

               
Cow position:
               
chr18:56247563-56247036 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
348
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
223, 53
               

               
Conread position:
               
8-552
               

               
Cow position:
               
chr18:42675491-42674942 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
556
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
55, 68
               

               
Conread position:
               
9-531
               

               
Cow position:
               
chr18:55008810-55009333 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
57, 45
               

               
Conread position:
               
9-532
               

               
Cow position:
               
chr18:53587084-53586559 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
316
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
142, 152
               

               
Conread position:
               
9-549
               

               
Cow position:
               
chr18:42837937-42837393 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
361
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 62
               

               
Conread position:
               
10-390
               

               
Cow position:
               
chr18:56128037-56128417 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
386
               

               
Alignm identity:
               
240
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
10-393
               

               
Cow position:
               
chr18:53636128-53635745 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
390
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
3e-32
               

               
Alignm gaps (pig, cow):
               
51, 66
               

               
Conread position:
               
10-531
               

               
Cow position:
               
chr18:49033382-49032859 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
66, 60
               

               
Conread position:
               
10-534
               

               
Cow position:
               
chr18:51368602-51368076 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
534
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
48, 6
               

               
Conread position:
               
10-538
               

               
Cow position:
               
chr18:43167960-43168490 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
538
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
53, 70
               

               
Conread position:
               
11-349
               

               
Cow position:
               
chr18:53498476-53498815 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
226
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
9, 46
               

               
Conread position:
               
11-534
               

               
Cow position:
               
chr18:52447361-52447886 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 58
               

               
Conread position:
               
11-538
               

               
Cow position:
               
chr18:40306169-40306699 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
540
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
11, 70
               

               
Conread position:
               
12-389
               

               
Cow position:
               
chr18:53610381-53610004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
51, 63
               

               
Conread position:
               
12-531
               

               
Cow position:
               
chr18:1417920-1418441 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
340
               

               
Alignm E-value:
               
1.4013e-45
               

               
Alignm gaps (pig, cow):
               
42, 69
               

               
Conread position:
               
13-224
               

               
Cow position:
               
chr18:43022228-43022017 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
214
               

               
Alignm identity:
               
154
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
42, 63
               

               
Conread position:
               
13-224
               

               
Cow position:
               
chr18:51839054-51838843 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
215
               

               
Alignm identity:
               
145
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
48, 63
               

               
Conread position:
               
13-299
               

               
Cow position:
               
chr18:44240516-44240802 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
292
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
13-321
               

               
Cow position:
               
chr18:42984801-42984492 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
313
               

               
Alignm identity:
               
217
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
43, 63
               

               
Conread position:
               
13-359
               

               
Cow position:
               
chr18:14453849-14453503 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
351
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
13-376
               

               
Cow position:
               
chr18:51969678-51970032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
231
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
13-386
               

               
Cow position:
               
chr18:51367592-51367219 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
46, 67
               

               
Conread position:
               
13-386
               

               
Cow position:
               
chr18:51751912-51751538 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
232
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
13-387
               

               
Cow position:
               
chr18:50049224-50048846 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
52, 151
               

               
Conread position:
               
13-387
               

               
Cow position:
               
chr18:50058948-50058574 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
380
               

               
Alignm identity:
               
248
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
63, 48
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr18:42791135-42791510 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
54, 67
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr18:50048800-50048425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
384
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
40, 61
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr18:50098978-50099353 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
379
               

               
Alignm identity:
               
238
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
64, 40
               

               
Conread position:
               
13-388
               

               
Cow position:
               
chr18:56316220-56316595 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
383
               

               
Alignm identity:
               
245
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
54, 63
               

               
Conread position:
               
13-389
               

               
Cow position:
               
chr18:51789134-51788758 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
382
               

               
Alignm identity:
               
242
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
13-389
               

               
Cow position:
               
chr18:53560265-53560641 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
381
               

               
Alignm identity:
               
234
               

               
Alignm E-value:
               
1e-24
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
13-438
               

               
Cow position:
               
chr18:41198334-41198759 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
431
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 56
               

               
Conread position:
               
13-448
               

               
Cow position:
               
chr18:43093247-43092813 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
442
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
13-469
               

               
Cow position:
               
chr18:42791051-42791508 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
296
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
39, 60
               

               
Conread position:
               
13-469
               

               
Cow position:
               
chr18:50030979-50030520 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
293
               

               
Alignm E-value:
               
1e-32
               

               
Alignm gaps (pig, cow):
               
138, 52
               

               
Conread position:
               
13-472
               

               
Cow position:
               
chr18:42744294-42743833 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
471
               

               
Alignm identity:
               
305
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
49, 64
               

               
Conread position:
               
13-472
               

               
Cow position:
               
chr18:51839306-51838845 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
467
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
133, 146
               

               
Conread position:
               
13-473
               

               
Cow position:
               
chr18:51812377-51811915 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
299
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
13-474
               

               
Cow position:
               
chr18:40324881-40324418 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
472
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 59
               

               
Conread position:
               
13-525
               

               
Cow position:
               
chr18:40324377-40323866 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
518
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr18:42675318-42674798 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
353
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr18:42791639-42792159 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
525
               

               
Alignm identity:
               
310
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
225, 230
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr18:42791891-42792411 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
129, 140
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr18:50271464-50271984 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
526
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
1e-31
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr18:50295275-50295795 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
13-531
               

               
Cow position:
               
chr18:56330184-56329664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
64, 57
               

               
Conread position:
               
13-532
               

               
Cow position:
               
chr18:42744546-42744025 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
352
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 60
               

               
Conread position:
               
13-532
               

               
Cow position:
               
chr18:42791387-42791908 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
306
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
124, 135
               

               
Conread position:
               
13-532
               

               
Cow position:
               
chr18:51812881-51812360 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
527
               

               
Alignm identity:
               
326
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
47, 63
               

               
Conread position:
               
13-533
               

               
Cow position:
               
chr18:41949009-41948487 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 64
               

               
Conread position:
               
13-533
               

               
Cow position:
               
chr18:50246080-50246602 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
317
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
33, 56
               

               
Conread position:
               
13-533
               

               
Cow position:
               
chr18:51367760-51367238 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
2e-28
               

               
Alignm gaps (pig, cow):
               
50, 77
               

               
Conread position:
               
13-534
               

               
Cow position:
               
chr18:42744630-42744107 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
529
               

               
Alignm identity:
               
339
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 52
               

               
Conread position:
               
13-534
               

               
Cow position:
               
chr18:44239844-44240367 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
533
               

               
Alignm identity:
               
343
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
63, 57
               

               
Conread position:
               
13-535
               

               
Cow position:
               
chr18:43093583-43093059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
351
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
13-538
               

               
Cow position:
               
chr18:40324797-40324270 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
532
               

               
Alignm identity:
               
332
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
13-541
               

               
Cow position:
               
chr18:51368431-51367901 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
536
               

               
Alignm identity:
               
322
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
53, 64
               

               
Conread position:
               
13-547
               

               
Cow position:
               
chr18:40086601-40086059 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
550
               

               
Alignm identity:
               
347
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
43, 153
               

               
Conread position:
               
13-549
               

               
Cow position:
               
chr18:33064683-33064143 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
552
               

               
Alignm identity:
               
359
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
68, 46
               

               
Conread position:
               
13-549
               

               
Cow position:
               
chr18:43023068-43022528 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
366
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
13-549
               

               
Cow position:
               
chr18:44240012-44240552 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
548
               

               
Alignm identity:
               
355
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
13-552
               

               
Cow position:
               
chr18:43094074-43093543 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
549
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
42, 60
               

               
Conread position:
               
13-552
               

               
Cow position:
               
chr18:50083453-50083997 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
551
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
50, 72
               

               
Conread position:
               
13-587
               

               
Cow position:
               
chr18:43022816-43022237 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
587
               

               
Alignm identity:
               
375
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
43, 64
               

               
Conread position:
               
13-587
               

               
Cow position:
               
chr18:44184883-44184304 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
586
               

               
Alignm identity:
               
388
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
14-297
               

               
Cow position:
               
chr18:51788965-51788682 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
287
               

               
Alignm identity:
               
181
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
49, 63
               

               
Conread position:
               
14-430
               

               
Cow position:
               
chr18:50281678-50282094 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
424
               

               
Alignm identity:
               
258
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
65, 39
               

               
Conread position:
               
14-470
               

               
Cow position:
               
chr18:50848423-50848881 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
288
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
45, 62
               

               
Conread position:
               
14-532
               

               
Cow position:
               
chr18:44254051-44253535 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
71, 57
               

               
Conread position:
               
14-549
               

               
Cow position:
               
chr18:40324961-40324425 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
547
               

               
Alignm identity:
               
345
               

               
Alignm E-value:
               
7e-40
               

               
Alignm gaps (pig, cow):
               
17, 8
               

               
Conread position:
               
15-524
               

               
Cow position:
               
chr18:33093101-33092591 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
329
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
147, 118
               

               
Conread position:
               
15-534
               

               
Cow position:
               
chr18:52446945-52447466 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
530
               

               
Alignm identity:
               
319
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
48, 57
               

               
Conread position:
               
16-367
               

               
Cow position:
               
chr18:43174846-43174495 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
357
               

               
Alignm identity:
               
241
               

               
Alignm E-value:
               
3.00004e-41
               

               
Alignm gaps (pig, cow):
               
51, 60
               

               
Conread position:
               
16-380
               

               
Cow position:
               
chr18:44154025-44153667 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
368
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2.99878e-43
               

               
Alignm gaps (pig, cow):
               
42, 52
               

               
Conread position:
               
16-534
               

               
Cow position:
               
chr18:41949090-41948570 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
528
               

               
Alignm identity:
               
338
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
47, 61
               

               
Conread position:
               
17-531
               

               
Cow position:
               
chr18:56247808-56247298 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
520
               

               
Alignm identity:
               
324
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
20, 136
               

               
Conread position:
               
18-534
               

               
Cow position:
               
chr18:42675397-42674879 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
325
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
65, 53
               

               
Conread position:
               
18-538
               

               
Cow position:
               
chr18:41948920-41948398 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
531
               

               
Alignm identity:
               
342
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
45, 58
               

               
Conread position:
               
19-471
               

               
Cow position:
               
chr18:53586486-53586032 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
463
               

               
Alignm identity:
               
290
               

               
Alignm E-value:
               
9e-31
               

               
Alignm gaps (pig, cow):
               
48, 58
               

               
Conread position:
               
19-549
               

               
Cow position:
               
chr18:41197500-41198034 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
354
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
62, 39
               

               
Conread position:
               
19-549
               

               
Cow position:
               
chr18:53610542-53610008 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
545
               

               
Alignm identity:
               
328
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
54, 37
               

               
Conread position:
               
22-366
               

               
Cow position:
               
chr18:55523992-55524336 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
348
               

               
Alignm identity:
               
218
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
55, 34
               

               
Conread position:
               
22-386
               

               
Cow position:
               
chr18:55008571-55008935 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
369
               

               
Alignm identity:
               
229
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
35, 55
               

               
Conread position:
               
22-534
               

               
Cow position:
               
chr18:55017892-55018406 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
1e-34
               

               
Alignm gaps (pig, cow):
               
44, 55
               

               
Conread position:
               
22-547
               

               
Cow position:
               
chr18:42985548-42985019 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
541
               

               
Alignm identity:
               
363
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
55, 49
               

               
Conread position:
               
23-466
               

               
Cow position:
               
chr18:50295201-50295646 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
450
               

               
Alignm identity:
               
291
               

               
Alignm E-value:
               
4.06377e-44
               

               
Alignm gaps (pig, cow):
               
44, 53
               

               
Conread position:
               
26-386
               

               
Cow position:
               
chr18:51765982-51765622 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
364
               

               
Alignm identity:
               
224
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
37, 51
               

               
Conread position:
               
26-534
               

               
Cow position:
               
chr18:51839545-51839035 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
516
               

               
Alignm identity:
               
308
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
50, 44
               

               
Conread position:
               
27-520
               

               
Cow position:
               
chr18:51752234-51751739 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
503
               

               
Alignm identity:
               
315
               

               
Alignm E-value:
               
2e-37
               

               
Alignm gaps (pig, cow):
               
30, 53
               

               
Conread position:
               
28-466
               

               
Cow position:
               
chr18:51874160-51874598 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
447
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
3e-22
               

               
Alignm gaps (pig, cow):
               
43, 37
               

               
Conread position:
               
28-534
               

               
Cow position:
               
chr18:51400298-51400806 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
522
               

               
Alignm identity:
               
327
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
48, 37
               

               
Conread position:
               
35-390
               

               
Cow position:
               
chr18:55067085-55066730 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
361
               

               
Alignm identity:
               
237
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
42, 35
               

               
Conread position:
               
36-438
               

               
Cow position:
               
chr18:51969617-51970010 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
262
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
22, 31
               

               
Conread position:
               
36-532
               

               
Cow position:
               
chr18:51969287-51969779 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
506
               

               
Alignm identity:
               
321
               

               
Alignm E-value:
               
6e-38
               

               
Alignm gaps (pig, cow):
               
96, 21
               

               
Conread position:
               
61-531
               

               
Cow position:
               
chr18:54966918-54967390 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
477
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
16, 9
               

               
Conread position:
               
62-363
               

               
Cow position:
               
chr18:43053493-43053190 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
310
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
17, 13
               

               
Conread position:
               
62-532
               

               
Cow position:
               
chr18:51789588-51789117 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
479
               

               
Alignm identity:
               
307
               

               
Alignm E-value:
               
9.00054e-42
               

               
Alignm gaps (pig, cow):
               
84, 14
               

               
Conread position:
               
66-473
               

               
Cow position:
               
chr18:44154481-44154070 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
416
               

               
Alignm identity:
               
270
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
80, 18
               

               
Conread position:
               
66-549
               

               
Cow position:
               
chr18:44184913-44184427 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
492
               

               
Alignm identity:
               
336
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
80, 9
               

               
Conread position:
               
73-463
               

               
Cow position:
               
chr18:44253337-44252946 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
252
               

               
Alignm E-value:
               
8e-30
               

               
Alignm gaps (pig, cow):
               
57, 87
               

               
Conread position:
               
73-471
               

               
Cow position:
               
chr18:43023092-43022692 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
409
               

               
Alignm identity:
               
273
               

               
Alignm E-value:
               
2e-40
               

               
Alignm gaps (pig, cow):
               
70, 60
               

               
Conread position:
               
75-389
               

               
Cow position:
               
chr18:50059642-50059328 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
318
               

               
Alignm identity:
               
204
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
75-465
               

               
Cow position:
               
chr18:42790945-42791337 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
398
               

               
Alignm identity:
               
253
               

               
Alignm E-value:
               
3e-31
               

               
Alignm gaps (pig, cow):
               
55, 60
               

               
Conread position:
               
75-534
               

               
Cow position:
               
chr18:1417815-1418276 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
3e-30
               

               
Alignm gaps (pig, cow):
               
146, 174
               

               
Conread position:
               
75-534
               

               
Cow position:
               
chr18:51789660-51789199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
1e-35
               

               
Alignm gaps (pig, cow):
               
71, 91
               

               
Conread position:
               
76-464
               

               
Cow position:
               
chr18:50098957-50099347 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
395
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
56, 85
               

               
Conread position:
               
79-538
               

               
Cow position:
               
chr18:52427534-52427995 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
469
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
79-580
               

               
Cow position:
               
chr18:52432883-52433389 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
515
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-25
               

               
Alignm gaps (pig, cow):
               
63, 81
               

               
Conread position:
               
80-534
               

               
Cow position:
               
chr18:49033396-49032940 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
465
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
4e-35
               

               
Alignm gaps (pig, cow):
               
20, 13
               

               
Conread position:
               
81-534
               

               
Cow position:
               
chr18:33093119-33092664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
295
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
10, 19
               

               
Conread position:
               
81-534
               

               
Cow position:
               
chr18:44239744-44240199 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
462
               

               
Alignm identity:
               
284
               

               
Alignm E-value:
               
7e-29
               

               
Alignm gaps (pig, cow):
               
68, 78
               

               
Conread position:
               
81-549
               

               
Cow position:
               
chr18:40086949-40086475 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
297
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
61, 47
               

               
Conread position:
               
82-469
               

               
Cow position:
               
chr18:43048740-43048352 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
396
               

               
Alignm identity:
               
269
               

               
Alignm E-value:
               
9.80909e-45
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
82-531
               

               
Cow position:
               
chr18:54993228-54993679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
458
               

               
Alignm identity:
               
275
               

               
Alignm E-value:
               
1e-21
               

               
Alignm gaps (pig, cow):
               
64, 84
               

               
Conread position:
               
82-533
               

               
Cow position:
               
chr18:42960311-42959858 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
294
               

               
Alignm E-value:
               
7e-39
               

               
Alignm gaps (pig, cow):
               
50, 82
               

               
Conread position:
               
82-534
               

               
Cow position:
               
chr18:42985572-42985118 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
302
               

               
Alignm E-value:
               
0
               

               
Alignm gaps (pig, cow):
               
48, 60
               

               
Conread position:
               
82-549
               

               
Cow position:
               
chr18:41949360-41948889 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
482
               

               
Alignm identity:
               
312
               

               
Alignm E-value:
               
5e-37
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
83-532
               

               
Cow position:
               
chr18:49022635-49023086 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
267
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
292, 286
               

               
Conread position:
               
84-388
               

               
Cow position:
               
chr18:53560420-53560724 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
306
               

               
Alignm identity:
               
193
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
290, 283
               

               
Conread position:
               
84-531
               

               
Cow position:
               
chr18:52012452-52012004 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
282
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
62, 43
               

               
Conread position:
               
85-531
               

               
Cow position:
               
chr18:42790871-42791319 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
454
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
1e-22
               

               
Alignm gaps (pig, cow):
               
64, 78
               

               
Conread position:
               
86-525
               

               
Cow position:
               
chr18:14453296-14452855 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
446
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
3.00018e-42
               

               
Alignm gaps (pig, cow):
               
75, 54
               

               
Conread position:
               
87-531
               

               
Cow position:
               
chr18:53525685-53526131 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
452
               

               
Alignm identity:
               
272
               

               
Alignm E-value:
               
4e-23
               

               
Alignm gaps (pig, cow):
               
26, 13
               

               
Conread position:
               
87-534
               

               
Cow position:
               
chr18:51874056-51874498 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
457
               

               
Alignm identity:
               
287
               

               
Alignm E-value:
               
2e-27
               

               
Alignm gaps (pig, cow):
               
46, 68
               

               
Conread position:
               
88-524
               

               
Cow position:
               
chr18:55067116-55066679 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
441
               

               
Alignm identity:
               
268
               

               
Alignm E-value:
               
2e-29
               

               
Alignm gaps (pig, cow):
               
228, 251
               

               
Conread position:
               
88-534
               

               
Cow position:
               
chr18:55523470-55523918 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
278
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
60, 73
               

               
Conread position:
               
90-532
               

               
Cow position:
               
chr18:43094163-43093722 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
449
               

               
Alignm identity:
               
274
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
66, 53
               

               
Conread position:
               
91-534
               

               
Cow position:
               
chr18:33065109-33064664 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
455
               

               
Alignm identity:
               
281
               

               
Alignm E-value:
               
2e-25
               

               
Alignm gaps (pig, cow):
               
26, 34
               

               
Conread position:
               
101-549
               

               
Cow position:
               
chr18:40306175-40306628 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
460
               

               
Alignm identity:
               
285
               

               
Alignm E-value:
               
6e-27
               

               
Alignm gaps (pig, cow):
               
5, 73
               

               
Conread position:
               
152-538
               

               
Cow position:
               
chr18:52446914-52447302 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
397
               

               
Alignm identity:
               
251
               

               
Alignm E-value:
               
2e-26
               

               
Alignm gaps (pig, cow):
               
79, 105
               

               
Conread position:
               
161-534
               

               
Cow position:
               
chr18:56248176-56247807 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
239
               

               
Alignm E-value:
               
6e-28
               

               
Alignm gaps (pig, cow):
               
87, 94
               

               
Conread position:
               
165-533
               

               
Cow position:
               
chr18:43048741-43048371 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
376
               

               
Alignm identity:
               
244
               

               
Alignm E-value:
               
4e-33
               

               
Alignm gaps (pig, cow):
               
63, 58
               

               
Conread position:
               
165-534
               

               
Cow position:
               
chr18:44154467-44154093 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
378
               

               
Alignm identity:
               
250
               

               
Alignm E-value:
               
2e-39
               

               
Alignm gaps (pig, cow):
               
66, 157
               

               
Conread position:
               
250-553
               

               
Cow position:
               
chr18:43023083-43022775 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
312
               

               
Alignm identity:
               
203
               

               
Alignm E-value:
               
5e-26
               

               
Alignm gaps (pig, cow):
               
67, 91
               

               
Conread position:
               
264-526
               

               
Cow position:
               
chr18:43053457-43053193 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
270
               

               
Alignm identity:
               
176
               

               
Alignm E-value:
               
9e-21
               

               
Alignm gaps (pig, cow):
               
50, 63
               

               
Conread position:
               
333-547
               

               
Cow position:
               
chr18:43048741-43048523 (view UCSC Genome Browser custom track)
               

               
Alignm length:
               
220
               

               
Alignm identity:
               
150
               

               
Alignm E-value:
               
1e-23
               

               
Alignm gaps (pig, cow):
               
67, 79
               
Show alignments to all cow chromosomes.