Cow genome map

Conread name: Ss1.1-rova002_o20.5

Conread position: 1-308
Cow position:
Alignm length: 315
Alignm identity: 207
Alignm E-value: 2e-26
Alignm gaps (pig, cow): 5, 67

Conread position: 1-519
Cow position:
Alignm length: 526
Alignm identity: 370
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 74

Conread position: 1-534
Cow position:
Alignm length: 541
Alignm identity: 343
Alignm E-value: 0
Alignm gaps (pig, cow): 5, 247

Conread position: 1-534
Cow position:
Alignm length: 544
Alignm identity: 344
Alignm E-value: 9.80909e-45
Alignm gaps (pig, cow): 5, 76

Conread position: 4-534
Cow position:
Alignm length: 536
Alignm identity: 326
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 222, 253

Conread position: 5-200
Cow position:
Alignm length: 198
Alignm identity: 139
Alignm E-value: 5e-25
Alignm gaps (pig, cow): 61, 72

Conread position: 5-369
Cow position:
Alignm length: 367
Alignm identity: 235
Alignm E-value: 1e-31
Alignm gaps (pig, cow): 57, 71

Conread position: 5-386
Cow position:
Alignm length: 386
Alignm identity: 242
Alignm E-value: 4e-24
Alignm gaps (pig, cow): 61, 68

Conread position: 5-389
Cow position:
Alignm length: 388
Alignm identity: 257
Alignm E-value: 1.4013e-45
Alignm gaps (pig, cow): 56, 50

Conread position: 5-448
Cow position:
Alignm length: 449
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 60

Conread position: 5-465
Cow position:
Alignm length: 467
Alignm identity: 317
Alignm E-value: 0
Alignm gaps (pig, cow): 61, 72

Conread position: 5-465
Cow position:
Alignm length: 473
Alignm identity: 308
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 72, 65

Conread position: 5-520
Cow position:
Alignm length: 523
Alignm identity: 328
Alignm E-value: 1e-32
Alignm gaps (pig, cow): 216, 100

Conread position: 5-524
Cow position:
Alignm length: 526
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 70, 65

Conread position: 5-531
Cow position:
Alignm length: 535
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 71

Conread position: 5-531
Cow position:
Alignm length: 536
Alignm identity: 336
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 72, 66

Conread position: 5-534
Cow position:
Alignm length: 541
Alignm identity: 344
Alignm E-value: 4.2039e-45
Alignm gaps (pig, cow): 12, 7

Conread position: 5-534
Cow position:
Alignm length: 540
Alignm identity: 347
Alignm E-value: 0
Alignm gaps (pig, cow): 71, 53

Conread position: 5-534
Cow position:
Alignm length: 538
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 58, 71

Conread position: 5-534
Cow position:
Alignm length: 543
Alignm identity: 344
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 71, 66

Conread position: 5-545
Cow position:
Alignm length: 548
Alignm identity: 346
Alignm E-value: 0
Alignm gaps (pig, cow): 72, 66

Conread position: 5-552
Cow position:
Alignm length: 558
Alignm identity: 374
Alignm E-value: 0
Alignm gaps (pig, cow): 132, 150

Conread position: 5-582
Cow position:
Alignm length: 586
Alignm identity: 388
Alignm E-value: 0
Alignm gaps (pig, cow): 225, 238

Conread position: 6-436
Cow position:
Alignm length: 443
Alignm identity: 294
Alignm E-value: 6e-38
Alignm gaps (pig, cow): 57, 73

Conread position: 6-531
Cow position:
Alignm length: 531
Alignm identity: 349
Alignm E-value: 0
Alignm gaps (pig, cow): 122, 154

Conread position: 7-365
Cow position:
Alignm length: 364
Alignm identity: 247
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 56, 65

Conread position: 7-388
Cow position:
Alignm length: 391
Alignm identity: 263
Alignm E-value: 2e-38
Alignm gaps (pig, cow): 59, 66

Conread position: 7-389
Cow position:
Alignm length: 388
Alignm identity: 260
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 56, 64

Conread position: 7-390
Cow position:
Alignm length: 389
Alignm identity: 259
Alignm E-value: 2.99878e-43
Alignm gaps (pig, cow): 49, 62

Conread position: 7-463
Cow position:
Alignm length: 463
Alignm identity: 298
Alignm E-value: 8.00001e-41
Alignm gaps (pig, cow): 52, 69

Conread position: 7-533
Cow position:
Alignm length: 533
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 154

Conread position: 7-535
Cow position:
Alignm length: 534
Alignm identity: 345
Alignm E-value: 0
Alignm gaps (pig, cow): 242, 248

Conread position: 7-538
Cow position:
Alignm length: 544
Alignm identity: 347
Alignm E-value: 4.06377e-44
Alignm gaps (pig, cow): 67, 49

Conread position: 7-549
Cow position:
Alignm length: 550
Alignm identity: 356
Alignm E-value: 0
Alignm gaps (pig, cow): 139, 153

Conread position: 7-551
Cow position:
Alignm length: 551
Alignm identity: 367
Alignm E-value: 0
Alignm gaps (pig, cow): 55, 69

Conread position: 7-585
Cow position:
Alignm length: 593
Alignm identity: 389
Alignm E-value: 0
Alignm gaps (pig, cow): 49, 69

Conread position: 8-386
Cow position:
Alignm length: 384
Alignm identity: 257
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 69, 46

Conread position: 10-435
Cow position:
Alignm length: 429
Alignm identity: 278
Alignm E-value: 3.00004e-41
Alignm gaps (pig, cow): 53, 66

Conread position: 12-534
Cow position:
Alignm length: 537
Alignm identity: 352
Alignm E-value: 0
Alignm gaps (pig, cow): 9, 55

Conread position: 13-353
Cow position:
Alignm length: 344
Alignm identity: 225
Alignm E-value: 3e-30
Alignm gaps (pig, cow): 133, 36

Conread position: 13-451
Cow position:
Alignm length: 449
Alignm identity: 294
Alignm E-value: 2e-40
Alignm gaps (pig, cow): 41, 54

Conread position: 13-526
Cow position:
Alignm length: 523
Alignm identity: 333
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 50, 63

Conread position: 13-534
Cow position:
Alignm length: 534
Alignm identity: 351
Alignm E-value: 0
Alignm gaps (pig, cow): 48, 43

Conread position: 13-534
Cow position:
Alignm length: 527
Alignm identity: 362
Alignm E-value: 0
Alignm gaps (pig, cow): 228, 209

Conread position: 13-534
Cow position:
Alignm length: 535
Alignm identity: 345
Alignm E-value: 9.94922e-44
Alignm gaps (pig, cow): 46, 59

Conread position: 13-549
Cow position:
Alignm length: 547
Alignm identity: 343
Alignm E-value: 1.00053e-42
Alignm gaps (pig, cow): 62, 57

Conread position: 14-531
Cow position:
Alignm length: 526
Alignm identity: 329
Alignm E-value: 2e-39
Alignm gaps (pig, cow): 49, 62

Conread position: 23-534
Cow position:
Alignm length: 517
Alignm identity: 319
Alignm E-value: 7e-40
Alignm gaps (pig, cow): 36, 52

Conread position: 30-517
Cow position:
Alignm length: 493
Alignm identity: 293
Alignm E-value: 3e-22
Alignm gaps (pig, cow): 34, 46

Conread position: 63-537
Cow position:
Alignm length: 481
Alignm identity: 315
Alignm E-value: 0
Alignm gaps (pig, cow): 33, 13

Conread position: 75-389
Cow position:
Alignm length: 319
Alignm identity: 207
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 99, 93

Conread position: 75-532
Cow position:
Alignm length: 465
Alignm identity: 292
Alignm E-value: 5e-36
Alignm gaps (pig, cow): 62, 78

Conread position: 82-526
Cow position:
Alignm length: 452
Alignm identity: 279
Alignm E-value: 8e-30
Alignm gaps (pig, cow): 144, 160

Conread position: 84-355
Cow position:
Alignm length: 275
Alignm identity: 185
Alignm E-value: 9e-31
Alignm gaps (pig, cow): 62, 76

Conread position: 158-389
Cow position:
Alignm length: 233
Alignm identity: 151
Alignm E-value: 1e-21
Alignm gaps (pig, cow): 90, 99

Conread position: 180-577
Cow position:
Alignm length: 408
Alignm identity: 257
Alignm E-value: 2e-28
Alignm gaps (pig, cow): 22, 26

Show alignments to all cow chromosomes.