Cow genome map


           Conread name:
           Ss1.1-rova002_o20.5
        

               Conread position:
               1-288
               

               Cow position:
               
               

               Alignm length:
               291
               

               Alignm identity:
               201
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               5, 77
               

               Conread position:
               3-389
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               267
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               60, 77
               

               Conread position:
               5-222
               

               Cow position:
               
               

               Alignm length:
               221
               

               Alignm identity:
               149
               

               Alignm E-value:
               7e-22
               

               Alignm gaps (pig, cow):
               66, 49
               

               Conread position:
               5-224
               

               Cow position:
               
               

               Alignm length:
               223
               

               Alignm identity:
               151
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               5-294
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               195
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               55, 67
               

               Conread position:
               5-300
               

               Cow position:
               
               

               Alignm length:
               301
               

               Alignm identity:
               203
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               72, 49
               

               Conread position:
               5-331
               

               Cow position:
               
               

               Alignm length:
               332
               

               Alignm identity:
               221
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               5-350
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 72
               

               Conread position:
               5-377
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               254
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               55, 64
               

               Conread position:
               5-396
               

               Cow position:
               
               

               Alignm length:
               397
               

               Alignm identity:
               260
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               70, 65
               

               Conread position:
               5-437
               

               Cow position:
               
               

               Alignm length:
               438
               

               Alignm identity:
               277
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               220, 231
               

               Conread position:
               5-470
               

               Cow position:
               
               

               Alignm length:
               476
               

               Alignm identity:
               310
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               76, 65
               

               Conread position:
               5-472
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               299
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               141, 51
               

               Conread position:
               5-472
               

               Cow position:
               
               

               Alignm length:
               477
               

               Alignm identity:
               310
               

               Alignm E-value:
               8.40779e-45
               

               Alignm gaps (pig, cow):
               53, 70
               

               Conread position:
               5-524
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               342
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               71, 66
               

               Conread position:
               5-531
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               340
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               353
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               326
               

               Alignm E-value:
               8e-33
               

               Alignm gaps (pig, cow):
               62, 67
               

               Conread position:
               5-538
               

               Cow position:
               
               

               Alignm length:
               541
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               231, 243
               

               Conread position:
               6-534
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               329
               

               Alignm E-value:
               1e-38
               

               Alignm gaps (pig, cow):
               41, 78
               

               Conread position:
               7-381
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               240
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               56, 73
               

               Conread position:
               7-471
               

               Cow position:
               
               

               Alignm length:
               472
               

               Alignm identity:
               303
               

               Alignm E-value:
               1.99993e-41
               

               Alignm gaps (pig, cow):
               72, 90
               

               Conread position:
               7-520
               

               Cow position:
               
               

               Alignm length:
               521
               

               Alignm identity:
               341
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               7-532
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               333
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               58, 69
               

               Conread position:
               11-534
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               334
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               9, 67
               

               Conread position:
               13-391
               

               Cow position:
               
               

               Alignm length:
               386
               

               Alignm identity:
               238
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               50, 63
               

               Conread position:
               13-426
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               284
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               64, 51
               

               Conread position:
               16-388
               

               Cow position:
               
               

               Alignm length:
               378
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               47, 73
               

               Conread position:
               16-532
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               341
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               26, 61
               

               Conread position:
               18-300
               

               Cow position:
               
               

               Alignm length:
               288
               

               Alignm identity:
               186
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               45, 56
               

               Conread position:
               21-302
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               28-532
               

               Cow position:
               
               

               Alignm length:
               515
               

               Alignm identity:
               321
               

               Alignm E-value:
               1e-35
               

               Alignm gaps (pig, cow):
               35, 48
               

               Conread position:
               70-532
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               302
               

               Alignm E-value:
               7.00649e-43
               

               Alignm gaps (pig, cow):
               7, 91
               

               Conread position:
               75-532
               

               Cow position:
               
               

               Alignm length:
               468
               

               Alignm identity:
               302
               

               Alignm E-value:
               2e-40
               

               Alignm gaps (pig, cow):
               147, 170
               

               Conread position:
               75-534
               

               Cow position:
               
               

               Alignm length:
               471
               

               Alignm identity:
               288
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               76-389
               

               Cow position:
               
               

               Alignm length:
               318
               

               Alignm identity:
               207
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               151, 158
               

               Conread position:
               83-532
               

               Cow position:
               
               

               Alignm length:
               461
               

               Alignm identity:
               296
               

               Alignm E-value:
               1e-36
               

               Alignm gaps (pig, cow):
               47, 65
               

               Conread position:
               91-538
               

               Cow position:
               
               

               Alignm length:
               456
               

               Alignm identity:
               297
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               55, 75
               

               Conread position:
               112-389
               

               Cow position:
               
               

               Alignm length:
               282
               

               Alignm identity:
               190
               

               Alignm E-value:
               6e-30
               

               Alignm gaps (pig, cow):
               34, 49
               

               Conread position:
               174-534
               

               Cow position:
               
               

               Alignm length:
               368
               

               Alignm identity:
               227
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               57, 65
               

               Conread position:
               189-389
               

               Cow position:
               
               

               Alignm length:
               204
               

               Alignm identity:
               140
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               42, 55
               

               Conread position:
               264-534
               

               Cow position:
               
               

               Alignm length:
               275
               

               Alignm identity:
               177
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               44, 31
               
Show alignments to all cow chromosomes.