Cow genome map


           Conread name:
           Ss1.1-rova002_o20.5
        

               Conread position:
               1-364
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               232
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               14, 61
               

               Conread position:
               1-552
               

               Cow position:
               
               

               Alignm length:
               566
               

               Alignm identity:
               371
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               5, 71
               

               Conread position:
               5-322
               

               Cow position:
               
               

               Alignm length:
               326
               

               Alignm identity:
               213
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               58, 67
               

               Conread position:
               5-358
               

               Cow position:
               
               

               Alignm length:
               359
               

               Alignm identity:
               240
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               54, 64
               

               Conread position:
               5-366
               

               Cow position:
               
               

               Alignm length:
               365
               

               Alignm identity:
               235
               

               Alignm E-value:
               7e-32
               

               Alignm gaps (pig, cow):
               127, 140
               

               Conread position:
               5-386
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               5-387
               

               Cow position:
               
               

               Alignm length:
               388
               

               Alignm identity:
               253
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               131, 125
               

               Conread position:
               5-388
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               254
               

               Alignm E-value:
               4e-38
               

               Alignm gaps (pig, cow):
               57, 71
               

               Conread position:
               5-388
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               257
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               57, 70
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               387
               

               Alignm identity:
               234
               

               Alignm E-value:
               1e-25
               

               Alignm gaps (pig, cow):
               126, 130
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               268
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 66
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               238
               

               Alignm E-value:
               3e-23
               

               Alignm gaps (pig, cow):
               52, 71
               

               Conread position:
               5-392
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               247
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               72, 65
               

               Conread position:
               5-448
               

               Cow position:
               
               

               Alignm length:
               448
               

               Alignm identity:
               295
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 66
               

               Conread position:
               5-517
               

               Cow position:
               
               

               Alignm length:
               522
               

               Alignm identity:
               329
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               61, 72
               

               Conread position:
               5-533
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 66
               

               Conread position:
               5-533
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               345
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               53, 71
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               354
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               73, 65
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               339
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               59, 48
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               554
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 66
               

               Conread position:
               6-387
               

               Cow position:
               
               

               Alignm length:
               385
               

               Alignm identity:
               254
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               6-413
               

               Cow position:
               
               

               Alignm length:
               413
               

               Alignm identity:
               259
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               14, 73
               

               Conread position:
               6-462
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               12, 70
               

               Conread position:
               6-471
               

               Cow position:
               
               

               Alignm length:
               473
               

               Alignm identity:
               317
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 52
               

               Conread position:
               7-309
               

               Cow position:
               
               

               Alignm length:
               306
               

               Alignm identity:
               204
               

               Alignm E-value:
               9e-34
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               7-449
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               303
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               7-533
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               7, 161
               

               Conread position:
               7-534
               

               Cow position:
               
               

               Alignm length:
               536
               

               Alignm identity:
               358
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               70, 63
               

               Conread position:
               7-538
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-39
               

               Alignm gaps (pig, cow):
               55, 63
               

               Conread position:
               10-377
               

               Cow position:
               
               

               Alignm length:
               371
               

               Alignm identity:
               240
               

               Alignm E-value:
               4e-37
               

               Alignm gaps (pig, cow):
               51, 64
               

               Conread position:
               10-377
               

               Cow position:
               
               

               Alignm length:
               374
               

               Alignm identity:
               246
               

               Alignm E-value:
               4e-36
               

               Alignm gaps (pig, cow):
               126, 120
               

               Conread position:
               10-466
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               301
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               42, 67
               

               Conread position:
               11-399
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               239
               

               Alignm E-value:
               2e-28
               

               Alignm gaps (pig, cow):
               120, 150
               

               Conread position:
               12-533
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               337
               

               Alignm E-value:
               2.8026e-45
               

               Alignm gaps (pig, cow):
               45, 55
               

               Conread position:
               13-387
               

               Cow position:
               
               

               Alignm length:
               379
               

               Alignm identity:
               250
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               118, 140
               

               Conread position:
               13-387
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               233
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               150, 160
               

               Conread position:
               13-549
               

               Cow position:
               
               

               Alignm length:
               547
               

               Alignm identity:
               342
               

               Alignm E-value:
               1.99965e-42
               

               Alignm gaps (pig, cow):
               121, 112
               

               Conread position:
               15-387
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               245
               

               Alignm E-value:
               2e-32
               

               Alignm gaps (pig, cow):
               130, 41
               

               Conread position:
               15-387
               

               Cow position:
               
               

               Alignm length:
               377
               

               Alignm identity:
               235
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               61, 55
               

               Conread position:
               15-534
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               329
               

               Alignm E-value:
               5e-39
               

               Alignm gaps (pig, cow):
               41, 54
               

               Conread position:
               27-388
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               253
               

               Alignm E-value:
               7.9874e-44
               

               Alignm gaps (pig, cow):
               30, 40
               

               Conread position:
               66-389
               

               Cow position:
               
               

               Alignm length:
               330
               

               Alignm identity:
               209
               

               Alignm E-value:
               9e-24
               

               Alignm gaps (pig, cow):
               85, 9
               

               Conread position:
               75-355
               

               Cow position:
               
               

               Alignm length:
               287
               

               Alignm identity:
               193
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               50, 60
               

               Conread position:
               76-534
               

               Cow position:
               
               

               Alignm length:
               469
               

               Alignm identity:
               289
               

               Alignm E-value:
               1e-26
               

               Alignm gaps (pig, cow):
               70, 91
               

               Conread position:
               84-534
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               290
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               171, 152
               

               Conread position:
               88-469
               

               Cow position:
               
               

               Alignm length:
               391
               

               Alignm identity:
               250
               

               Alignm E-value:
               2e-29
               

               Alignm gaps (pig, cow):
               44, 65
               

               Conread position:
               94-534
               

               Cow position:
               
               

               Alignm length:
               447
               

               Alignm identity:
               282
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               36, 72
               

               Conread position:
               95-533
               

               Cow position:
               
               

               Alignm length:
               444
               

               Alignm identity:
               279
               

               Alignm E-value:
               5e-28
               

               Alignm gaps (pig, cow):
               136, 37
               

               Conread position:
               98-377
               

               Cow position:
               
               

               Alignm length:
               286
               

               Alignm identity:
               186
               

               Alignm E-value:
               7e-21
               

               Alignm gaps (pig, cow):
               30, 37
               

               Conread position:
               147-533
               

               Cow position:
               
               

               Alignm length:
               392
               

               Alignm identity:
               242
               

               Alignm E-value:
               4e-27
               

               Alignm gaps (pig, cow):
               78, 27
               
Show alignments to all cow chromosomes.