Cow genome map

Conread name: Ss1.1-rova002_o20.5

Conread position: 1-386
Cow position: chr28:7757487-7757872 (view UCSC Genome Browser custom track)
Alignm length: 390
Alignm identity: 252
Alignm E-value: 1e-37
Alignm gaps (pig, cow): 5, 76

Conread position: 1-389
Cow position: chr28:9290240-9290626 (view UCSC Genome Browser custom track)
Alignm length: 394
Alignm identity: 253
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 73, 52

Conread position: 5-308
Cow position: chr28:9290411-9290713 (view UCSC Genome Browser custom track)
Alignm length: 308
Alignm identity: 202
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 62, 54

Conread position: 5-363
Cow position: chr28:34696240-34696595 (view UCSC Genome Browser custom track)
Alignm length: 366
Alignm identity: 237
Alignm E-value: 1e-27
Alignm gaps (pig, cow): 58, 70

Conread position: 5-369
Cow position: chr28:7810583-7810947 (view UCSC Genome Browser custom track)
Alignm length: 369
Alignm identity: 240
Alignm E-value: 3e-37
Alignm gaps (pig, cow): 76, 49

Conread position: 5-382
Cow position: chr28:34673431-34673809 (view UCSC Genome Browser custom track)
Alignm length: 382
Alignm identity: 243
Alignm E-value: 2e-34
Alignm gaps (pig, cow): 80, 54

Conread position: 5-387
Cow position: chr28:9290328-9290708 (view UCSC Genome Browser custom track)
Alignm length: 389
Alignm identity: 249
Alignm E-value: 5e-31
Alignm gaps (pig, cow): 49, 71

Conread position: 5-463
Cow position: chr28:7810340-7810791 (view UCSC Genome Browser custom track)
Alignm length: 466
Alignm identity: 293
Alignm E-value: 2e-31
Alignm gaps (pig, cow): 62, 48

Conread position: 5-520
Cow position: chr28:9298644-9299156 (view UCSC Genome Browser custom track)
Alignm length: 523
Alignm identity: 321
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 56, 21

Conread position: 5-529
Cow position: chr28:9253095-9253622 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 56, 72

Conread position: 5-552
Cow position: chr28:34695988-34696540 (view UCSC Genome Browser custom track)
Alignm length: 564
Alignm identity: 348
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 52, 81

Conread position: 6-297
Cow position: chr28:7758483-7758776 (view UCSC Genome Browser custom track)
Alignm length: 299
Alignm identity: 204
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 14, 72

Conread position: 6-534
Cow position: chr28:9253010-9253542 (view UCSC Genome Browser custom track)
Alignm length: 538
Alignm identity: 348
Alignm E-value: 0
Alignm gaps (pig, cow): 15, 66

Conread position: 7-271
Cow position: chr28:9299299-9299563 (view UCSC Genome Browser custom track)
Alignm length: 268
Alignm identity: 174
Alignm E-value: 8e-25
Alignm gaps (pig, cow): 220, 232

Conread position: 7-466
Cow position: chr28:7757830-7758291 (view UCSC Genome Browser custom track)
Alignm length: 467
Alignm identity: 301
Alignm E-value: 1.96182e-44
Alignm gaps (pig, cow): 56, 69

Conread position: 9-351
Cow position: chr28:9299217-9299559 (view UCSC Genome Browser custom track)
Alignm length: 350
Alignm identity: 229
Alignm E-value: 6e-32
Alignm gaps (pig, cow): 49, 61

Conread position: 10-365
Cow position: chr28:7758405-7758760 (view UCSC Genome Browser custom track)
Alignm length: 361
Alignm identity: 230
Alignm E-value: 1e-28
Alignm gaps (pig, cow): 53, 79

Conread position: 13-371
Cow position: chr28:7758324-7758681 (view UCSC Genome Browser custom track)
Alignm length: 362
Alignm identity: 208
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 133, 146

Conread position: 13-387
Cow position: chr28:7757920-7758294 (view UCSC Genome Browser custom track)
Alignm length: 381
Alignm identity: 245
Alignm E-value: 7e-33
Alignm gaps (pig, cow): 63, 40

Conread position: 13-533
Cow position: chr28:9290001-9290520 (view UCSC Genome Browser custom track)
Alignm length: 533
Alignm identity: 325
Alignm E-value: 3e-25
Alignm gaps (pig, cow): 36, 29

Conread position: 13-534
Cow position: chr28:7757416-7757939 (view UCSC Genome Browser custom track)
Alignm length: 529
Alignm identity: 334
Alignm E-value: 0
Alignm gaps (pig, cow): 63, 57

Conread position: 15-308
Cow position: chr28:7758006-7758299 (view UCSC Genome Browser custom track)
Alignm length: 295
Alignm identity: 203
Alignm E-value: 6.00036e-42
Alignm gaps (pig, cow): 50, 61

Conread position: 15-532
Cow position: chr28:7757334-7757853 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 326
Alignm E-value: 3e-35
Alignm gaps (pig, cow): 64, 41

Conread position: 16-534
Cow position: chr28:7757755-7758275 (view UCSC Genome Browser custom track)
Alignm length: 528
Alignm identity: 344
Alignm E-value: 0
Alignm gaps (pig, cow): 40, 51

Conread position: 20-389
Cow position: chr28:34673362-34673731 (view UCSC Genome Browser custom track)
Alignm length: 373
Alignm identity: 234
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 47, 56

Conread position: 35-448
Cow position: chr28:7810529-7810942 (view UCSC Genome Browser custom track)
Alignm length: 421
Alignm identity: 265
Alignm E-value: 2e-30
Alignm gaps (pig, cow): 18, 32

Conread position: 75-387
Cow position: chr28:7810326-7810629 (view UCSC Genome Browser custom track)
Alignm length: 316
Alignm identity: 204
Alignm E-value: 3e-24
Alignm gaps (pig, cow): 71, 85

Conread position: 76-367
Cow position: chr28:11333906-11333615 (view UCSC Genome Browser custom track)
Alignm length: 297
Alignm identity: 189
Alignm E-value: 2e-21
Alignm gaps (pig, cow): 55, 97

Conread position: 81-534
Cow position: chr28:9253003-9253458 (view UCSC Genome Browser custom track)
Alignm length: 462
Alignm identity: 295
Alignm E-value: 5e-40
Alignm gaps (pig, cow): 64, 79

Conread position: 93-463
Cow position: chr28:9299217-9299586 (view UCSC Genome Browser custom track)
Alignm length: 372
Alignm identity: 234
Alignm E-value: 7e-34
Alignm gaps (pig, cow): 154, 158

Conread position: 95-538
Cow position: chr28:34673353-34673798 (view UCSC Genome Browser custom track)
Alignm length: 450
Alignm identity: 274
Alignm E-value: 4e-28
Alignm gaps (pig, cow): 160, 128

Conread position: 248-534
Cow position: chr28:9253002-9253290 (view UCSC Genome Browser custom track)
Alignm length: 298
Alignm identity: 199
Alignm E-value: 2e-22
Alignm gaps (pig, cow): 65, 83

Show alignments to all cow chromosomes.