Cow genome map


           Conread name:
           Ss1.1-rova002_o20.5
        

               Conread position:
               1-386
               

               Cow position:
               
               

               Alignm length:
               390
               

               Alignm identity:
               252
               

               Alignm E-value:
               1e-37
               

               Alignm gaps (pig, cow):
               5, 76
               

               Conread position:
               1-389
               

               Cow position:
               
               

               Alignm length:
               394
               

               Alignm identity:
               253
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               73, 52
               

               Conread position:
               5-308
               

               Cow position:
               
               

               Alignm length:
               308
               

               Alignm identity:
               202
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               62, 54
               

               Conread position:
               5-363
               

               Cow position:
               
               

               Alignm length:
               366
               

               Alignm identity:
               237
               

               Alignm E-value:
               1e-27
               

               Alignm gaps (pig, cow):
               58, 70
               

               Conread position:
               5-369
               

               Cow position:
               
               

               Alignm length:
               369
               

               Alignm identity:
               240
               

               Alignm E-value:
               3e-37
               

               Alignm gaps (pig, cow):
               76, 49
               

               Conread position:
               5-382
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               243
               

               Alignm E-value:
               2e-34
               

               Alignm gaps (pig, cow):
               80, 54
               

               Conread position:
               5-387
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               249
               

               Alignm E-value:
               5e-31
               

               Alignm gaps (pig, cow):
               49, 71
               

               Conread position:
               5-463
               

               Cow position:
               
               

               Alignm length:
               466
               

               Alignm identity:
               293
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               62, 48
               

               Conread position:
               5-520
               

               Cow position:
               
               

               Alignm length:
               523
               

               Alignm identity:
               321
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               56, 21
               

               Conread position:
               5-529
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 72
               

               Conread position:
               5-552
               

               Cow position:
               
               

               Alignm length:
               564
               

               Alignm identity:
               348
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               52, 81
               

               Conread position:
               6-297
               

               Cow position:
               
               

               Alignm length:
               299
               

               Alignm identity:
               204
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               14, 72
               

               Conread position:
               6-534
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               348
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               15, 66
               

               Conread position:
               7-271
               

               Cow position:
               
               

               Alignm length:
               268
               

               Alignm identity:
               174
               

               Alignm E-value:
               8e-25
               

               Alignm gaps (pig, cow):
               220, 232
               

               Conread position:
               7-466
               

               Cow position:
               
               

               Alignm length:
               467
               

               Alignm identity:
               301
               

               Alignm E-value:
               1.96182e-44
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               9-351
               

               Cow position:
               
               

               Alignm length:
               350
               

               Alignm identity:
               229
               

               Alignm E-value:
               6e-32
               

               Alignm gaps (pig, cow):
               49, 61
               

               Conread position:
               10-365
               

               Cow position:
               
               

               Alignm length:
               361
               

               Alignm identity:
               230
               

               Alignm E-value:
               1e-28
               

               Alignm gaps (pig, cow):
               53, 79
               

               Conread position:
               13-371
               

               Cow position:
               
               

               Alignm length:
               362
               

               Alignm identity:
               208
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               133, 146
               

               Conread position:
               13-387
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               245
               

               Alignm E-value:
               7e-33
               

               Alignm gaps (pig, cow):
               63, 40
               

               Conread position:
               13-533
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               325
               

               Alignm E-value:
               3e-25
               

               Alignm gaps (pig, cow):
               36, 29
               

               Conread position:
               13-534
               

               Cow position:
               
               

               Alignm length:
               529
               

               Alignm identity:
               334
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               15-308
               

               Cow position:
               
               

               Alignm length:
               295
               

               Alignm identity:
               203
               

               Alignm E-value:
               6.00036e-42
               

               Alignm gaps (pig, cow):
               50, 61
               

               Conread position:
               15-532
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               326
               

               Alignm E-value:
               3e-35
               

               Alignm gaps (pig, cow):
               64, 41
               

               Conread position:
               16-534
               

               Cow position:
               
               

               Alignm length:
               528
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               40, 51
               

               Conread position:
               20-389
               

               Cow position:
               
               

               Alignm length:
               373
               

               Alignm identity:
               234
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               47, 56
               

               Conread position:
               35-448
               

               Cow position:
               
               

               Alignm length:
               421
               

               Alignm identity:
               265
               

               Alignm E-value:
               2e-30
               

               Alignm gaps (pig, cow):
               18, 32
               

               Conread position:
               75-387
               

               Cow position:
               
               

               Alignm length:
               316
               

               Alignm identity:
               204
               

               Alignm E-value:
               3e-24
               

               Alignm gaps (pig, cow):
               71, 85
               

               Conread position:
               76-367
               

               Cow position:
               
               

               Alignm length:
               297
               

               Alignm identity:
               189
               

               Alignm E-value:
               2e-21
               

               Alignm gaps (pig, cow):
               55, 97
               

               Conread position:
               81-534
               

               Cow position:
               
               

               Alignm length:
               462
               

               Alignm identity:
               295
               

               Alignm E-value:
               5e-40
               

               Alignm gaps (pig, cow):
               64, 79
               

               Conread position:
               93-463
               

               Cow position:
               
               

               Alignm length:
               372
               

               Alignm identity:
               234
               

               Alignm E-value:
               7e-34
               

               Alignm gaps (pig, cow):
               154, 158
               

               Conread position:
               95-538
               

               Cow position:
               
               

               Alignm length:
               450
               

               Alignm identity:
               274
               

               Alignm E-value:
               4e-28
               

               Alignm gaps (pig, cow):
               160, 128
               

               Conread position:
               248-534
               

               Cow position:
               
               

               Alignm length:
               298
               

               Alignm identity:
               199
               

               Alignm E-value:
               2e-22
               

               Alignm gaps (pig, cow):
               65, 83
               
Show alignments to all cow chromosomes.