Cow genome map


           Conread name:
           Ss1.1-rova002_o20.5
        

               Conread position:
               1-388
               

               Cow position:
               
               

               Alignm length:
               395
               

               Alignm identity:
               249
               

               Alignm E-value:
               2e-27
               

               Alignm gaps (pig, cow):
               5, 166
               

               Conread position:
               4-438
               

               Cow position:
               
               

               Alignm length:
               442
               

               Alignm identity:
               277
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               65, 55
               

               Conread position:
               5-474
               

               Cow position:
               
               

               Alignm length:
               480
               

               Alignm identity:
               325
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 71
               

               Conread position:
               5-526
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               342
               

               Alignm E-value:
               1.00053e-42
               

               Alignm gaps (pig, cow):
               63, 49
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               332
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               535
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               128, 148
               

               Conread position:
               5-532
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               321
               

               Alignm E-value:
               2e-24
               

               Alignm gaps (pig, cow):
               58, 68
               

               Conread position:
               5-533
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               67, 49
               

               Conread position:
               5-533
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               341
               

               Alignm E-value:
               5e-35
               

               Alignm gaps (pig, cow):
               50, 64
               

               Conread position:
               5-533
               

               Cow position:
               
               

               Alignm length:
               538
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               57, 68
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               347
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 63
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               540
               

               Alignm identity:
               344
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               72, 54
               

               Conread position:
               5-535
               

               Cow position:
               
               

               Alignm length:
               543
               

               Alignm identity:
               342
               

               Alignm E-value:
               2e-38
               

               Alignm gaps (pig, cow):
               51, 62
               

               Conread position:
               5-537
               

               Cow position:
               
               

               Alignm length:
               542
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               7-475
               

               Cow position:
               
               

               Alignm length:
               478
               

               Alignm identity:
               300
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               72, 79
               

               Conread position:
               7-533
               

               Cow position:
               
               

               Alignm length:
               537
               

               Alignm identity:
               342
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               7-551
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               356
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               54, 73
               

               Conread position:
               7-552
               

               Cow position:
               
               

               Alignm length:
               556
               

               Alignm identity:
               342
               

               Alignm E-value:
               7e-39
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               10-532
               

               Cow position:
               
               

               Alignm length:
               533
               

               Alignm identity:
               329
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               67, 43
               

               Conread position:
               13-389
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               254
               

               Alignm E-value:
               3.00004e-41
               

               Alignm gaps (pig, cow):
               53, 63
               

               Conread position:
               13-532
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               331
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               8, 99
               

               Conread position:
               15-389
               

               Cow position:
               
               

               Alignm length:
               382
               

               Alignm identity:
               260
               

               Alignm E-value:
               5.60519e-45
               

               Alignm gaps (pig, cow):
               43, 50
               

               Conread position:
               16-531
               

               Cow position:
               
               

               Alignm length:
               527
               

               Alignm identity:
               337
               

               Alignm E-value:
               9.80909e-45
               

               Alignm gaps (pig, cow):
               45, 53
               

               Conread position:
               76-532
               

               Cow position:
               
               

               Alignm length:
               463
               

               Alignm identity:
               289
               

               Alignm E-value:
               2e-36
               

               Alignm gaps (pig, cow):
               67, 97
               

               Conread position:
               79-533
               

               Cow position:
               
               

               Alignm length:
               465
               

               Alignm identity:
               291
               

               Alignm E-value:
               9e-31
               

               Alignm gaps (pig, cow):
               145, 158
               

               Conread position:
               118-538
               

               Cow position:
               
               

               Alignm length:
               429
               

               Alignm identity:
               261
               

               Alignm E-value:
               4e-22
               

               Alignm gaps (pig, cow):
               33, 42
               
Show alignments to all cow chromosomes.