Cow genome map
| Conread name: | Ss1.1-rova002_o20.5 |
| Conread position: | 1-388 |
| Cow position: | chr8:55581313-55581701 (view UCSC Genome Browser custom track) |
| Alignm length: | 395 |
| Alignm identity: | 249 |
| Alignm E-value: | 2e-27 |
| Alignm gaps (pig, cow): | 5, 166 |
| Conread position: | 4-438 |
| Cow position: | chr8:48406715-48406281 (view UCSC Genome Browser custom track) |
| Alignm length: | 442 |
| Alignm identity: | 277 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 65, 55 |
| Conread position: | 5-474 |
| Cow position: | chr8:45201514-45201985 (view UCSC Genome Browser custom track) |
| Alignm length: | 480 |
| Alignm identity: | 325 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 71 |
| Conread position: | 5-526 |
| Cow position: | chr8:46816121-46816644 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 342 |
| Alignm E-value: | 1.00053e-42 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 5-532 |
| Cow position: | chr8:45201094-45201623 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 332 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 5-532 |
| Cow position: | chr8:45201346-45201875 (view UCSC Genome Browser custom track) |
| Alignm length: | 535 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 128, 148 |
| Conread position: | 5-532 |
| Cow position: | chr8:48406882-48406353 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 321 |
| Alignm E-value: | 2e-24 |
| Alignm gaps (pig, cow): | 58, 68 |
| Conread position: | 5-533 |
| Cow position: | chr8:46816541-46817071 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 67, 49 |
| Conread position: | 5-533 |
| Cow position: | chr8:48407134-48406604 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 341 |
| Alignm E-value: | 5e-35 |
| Alignm gaps (pig, cow): | 50, 64 |
| Conread position: | 5-533 |
| Cow position: | chr8:55580898-55581428 (view UCSC Genome Browser custom track) |
| Alignm length: | 538 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 57, 68 |
| Conread position: | 5-534 |
| Cow position: | chr8:45201178-45201709 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 347 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 63 |
| Conread position: | 5-534 |
| Cow position: | chr8:55581066-55581597 (view UCSC Genome Browser custom track) |
| Alignm length: | 540 |
| Alignm identity: | 344 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 72, 54 |
| Conread position: | 5-535 |
| Cow position: | chr8:48407470-48406938 (view UCSC Genome Browser custom track) |
| Alignm length: | 543 |
| Alignm identity: | 342 |
| Alignm E-value: | 2e-38 |
| Alignm gaps (pig, cow): | 51, 62 |
| Conread position: | 5-537 |
| Cow position: | chr8:45201010-45201544 (view UCSC Genome Browser custom track) |
| Alignm length: | 542 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 7-475 |
| Cow position: | chr8:46816879-46817349 (view UCSC Genome Browser custom track) |
| Alignm length: | 478 |
| Alignm identity: | 300 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 72, 79 |
| Conread position: | 7-533 |
| Cow position: | chr8:46816459-46816987 (view UCSC Genome Browser custom track) |
| Alignm length: | 537 |
| Alignm identity: | 342 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 7-551 |
| Cow position: | chr8:46816375-46816924 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 356 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 54, 73 |
| Conread position: | 7-552 |
| Cow position: | chr8:48407552-48407002 (view UCSC Genome Browser custom track) |
| Alignm length: | 556 |
| Alignm identity: | 342 |
| Alignm E-value: | 7e-39 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 10-532 |
| Cow position: | chr8:48407633-48407109 (view UCSC Genome Browser custom track) |
| Alignm length: | 533 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 67, 43 |
| Conread position: | 13-389 |
| Cow position: | chr8:55581242-55581618 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 254 |
| Alignm E-value: | 3.00004e-41 |
| Alignm gaps (pig, cow): | 53, 63 |
| Conread position: | 13-532 |
| Cow position: | chr8:55580737-55581259 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 331 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 8, 99 |
| Conread position: | 15-389 |
| Cow position: | chr8:45200936-45201310 (view UCSC Genome Browser custom track) |
| Alignm length: | 382 |
| Alignm identity: | 260 |
| Alignm E-value: | 5.60519e-45 |
| Alignm gaps (pig, cow): | 43, 50 |
| Conread position: | 16-531 |
| Cow position: | chr8:46815964-46816481 (view UCSC Genome Browser custom track) |
| Alignm length: | 527 |
| Alignm identity: | 337 |
| Alignm E-value: | 9.80909e-45 |
| Alignm gaps (pig, cow): | 45, 53 |
| Conread position: | 76-532 |
| Cow position: | chr8:45200913-45201371 (view UCSC Genome Browser custom track) |
| Alignm length: | 463 |
| Alignm identity: | 289 |
| Alignm E-value: | 2e-36 |
| Alignm gaps (pig, cow): | 67, 97 |
| Conread position: | 79-533 |
| Cow position: | chr8:48407648-48407192 (view UCSC Genome Browser custom track) |
| Alignm length: | 465 |
| Alignm identity: | 291 |
| Alignm E-value: | 9e-31 |
| Alignm gaps (pig, cow): | 145, 158 |
| Conread position: | 118-538 |
| Cow position: | chr8:6958059-6957638 (view UCSC Genome Browser custom track) |
| Alignm length: | 429 |
| Alignm identity: | 261 |
| Alignm E-value: | 4e-22 |
| Alignm gaps (pig, cow): | 33, 42 |
Show alignments to all cow chromosomes.