Cow genome map
| Conread name: | Ss1.1-rova002_o20.5 |
| Conread position: | 2-552 |
| Cow position: | chrX:12627344-12627897 (view UCSC Genome Browser custom track) |
| Alignm length: | 558 |
| Alignm identity: | 349 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 141, 131 |
| Conread position: | 3-549 |
| Cow position: | chrX:25325597-25325047 (view UCSC Genome Browser custom track) |
| Alignm length: | 557 |
| Alignm identity: | 359 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 64 |
| Conread position: | 5-364 |
| Cow position: | chrX:25324587-25324230 (view UCSC Genome Browser custom track) |
| Alignm length: | 364 |
| Alignm identity: | 226 |
| Alignm E-value: | 1e-24 |
| Alignm gaps (pig, cow): | 56, 64 |
| Conread position: | 5-389 |
| Cow position: | chrX:29045100-29044716 (view UCSC Genome Browser custom track) |
| Alignm length: | 389 |
| Alignm identity: | 263 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 58, 71 |
| Conread position: | 5-453 |
| Cow position: | chrX:25310134-25310582 (view UCSC Genome Browser custom track) |
| Alignm length: | 454 |
| Alignm identity: | 298 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 146, 156 |
| Conread position: | 5-469 |
| Cow position: | chrX:12627598-12628063 (view UCSC Genome Browser custom track) |
| Alignm length: | 470 |
| Alignm identity: | 298 |
| Alignm E-value: | 2.99878e-43 |
| Alignm gaps (pig, cow): | 225, 70 |
| Conread position: | 5-525 |
| Cow position: | chrX:25325259-25324737 (view UCSC Genome Browser custom track) |
| Alignm length: | 530 |
| Alignm identity: | 337 |
| Alignm E-value: | 1.4013e-45 |
| Alignm gaps (pig, cow): | 63, 49 |
| Conread position: | 5-534 |
| Cow position: | chrX:25309798-25310329 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 343 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 52, 70 |
| Conread position: | 5-534 |
| Cow position: | chrX:25309882-25310413 (view UCSC Genome Browser custom track) |
| Alignm length: | 539 |
| Alignm identity: | 346 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 47, 69 |
| Conread position: | 5-549 |
| Cow position: | chrX:12627514-12628061 (view UCSC Genome Browser custom track) |
| Alignm length: | 553 |
| Alignm identity: | 352 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 62, 79 |
| Conread position: | 7-475 |
| Cow position: | chrX:25324669-25324203 (view UCSC Genome Browser custom track) |
| Alignm length: | 474 |
| Alignm identity: | 293 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 56, 78 |
| Conread position: | 7-475 |
| Cow position: | chrX:25324921-25324451 (view UCSC Genome Browser custom track) |
| Alignm length: | 475 |
| Alignm identity: | 307 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 56, 69 |
| Conread position: | 7-549 |
| Cow position: | chrX:29045266-29044720 (view UCSC Genome Browser custom track) |
| Alignm length: | 552 |
| Alignm identity: | 346 |
| Alignm E-value: | 2.94273e-44 |
| Alignm gaps (pig, cow): | 56, 70 |
| Conread position: | 8-386 |
| Cow position: | chrX:29045832-29045454 (view UCSC Genome Browser custom track) |
| Alignm length: | 381 |
| Alignm identity: | 237 |
| Alignm E-value: | 2e-31 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 8-531 |
| Cow position: | chrX:25325676-25325151 (view UCSC Genome Browser custom track) |
| Alignm length: | 534 |
| Alignm identity: | 329 |
| Alignm E-value: | 1e-33 |
| Alignm gaps (pig, cow): | 53, 76 |
| Conread position: | 13-364 |
| Cow position: | chrX:29045008-29044657 (view UCSC Genome Browser custom track) |
| Alignm length: | 357 |
| Alignm identity: | 233 |
| Alignm E-value: | 1e-34 |
| Alignm gaps (pig, cow): | 61, 45 |
| Conread position: | 13-523 |
| Cow position: | chrX:25325083-25324571 (view UCSC Genome Browser custom track) |
| Alignm length: | 517 |
| Alignm identity: | 329 |
| Alignm E-value: | 0 |
| Alignm gaps (pig, cow): | 43, 56 |
| Conread position: | 13-534 |
| Cow position: | chrX:25325419-25324896 (view UCSC Genome Browser custom track) |
| Alignm length: | 531 |
| Alignm identity: | 335 |
| Alignm E-value: | 8.99634e-43 |
| Alignm gaps (pig, cow): | 63, 57 |
| Conread position: | 16-526 |
| Cow position: | chrX:25325837-25325324 (view UCSC Genome Browser custom track) |
| Alignm length: | 519 |
| Alignm identity: | 313 |
| Alignm E-value: | 7e-30 |
| Alignm gaps (pig, cow): | 5, 70 |
| Conread position: | 22-464 |
| Cow position: | chrX:12627280-12627722 (view UCSC Genome Browser custom track) |
| Alignm length: | 452 |
| Alignm identity: | 289 |
| Alignm E-value: | 4e-35 |
| Alignm gaps (pig, cow): | 43, 53 |
| Conread position: | 75-532 |
| Cow position: | chrX:25309700-25310159 (view UCSC Genome Browser custom track) |
| Alignm length: | 464 |
| Alignm identity: | 299 |
| Alignm E-value: | 4.2039e-45 |
| Alignm gaps (pig, cow): | 63, 85 |
| Conread position: | 86-514 |
| Cow position: | chrX:29045838-29045408 (view UCSC Genome Browser custom track) |
| Alignm length: | 434 |
| Alignm identity: | 267 |
| Alignm E-value: | 7e-31 |
| Alignm gaps (pig, cow): | 65, 81 |
Show alignments to all cow chromosomes.