Cow genome map


           Conread name:
           Ss1.1-rova002_o20.5
        

               Conread position:
               2-552
               

               Cow position:
               
               

               Alignm length:
               558
               

               Alignm identity:
               349
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               141, 131
               

               Conread position:
               3-549
               

               Cow position:
               
               

               Alignm length:
               557
               

               Alignm identity:
               359
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 64
               

               Conread position:
               5-364
               

               Cow position:
               
               

               Alignm length:
               364
               

               Alignm identity:
               226
               

               Alignm E-value:
               1e-24
               

               Alignm gaps (pig, cow):
               56, 64
               

               Conread position:
               5-389
               

               Cow position:
               
               

               Alignm length:
               389
               

               Alignm identity:
               263
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               58, 71
               

               Conread position:
               5-453
               

               Cow position:
               
               

               Alignm length:
               454
               

               Alignm identity:
               298
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               146, 156
               

               Conread position:
               5-469
               

               Cow position:
               
               

               Alignm length:
               470
               

               Alignm identity:
               298
               

               Alignm E-value:
               2.99878e-43
               

               Alignm gaps (pig, cow):
               225, 70
               

               Conread position:
               5-525
               

               Cow position:
               
               

               Alignm length:
               530
               

               Alignm identity:
               337
               

               Alignm E-value:
               1.4013e-45
               

               Alignm gaps (pig, cow):
               63, 49
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               343
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               52, 70
               

               Conread position:
               5-534
               

               Cow position:
               
               

               Alignm length:
               539
               

               Alignm identity:
               346
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               47, 69
               

               Conread position:
               5-549
               

               Cow position:
               
               

               Alignm length:
               553
               

               Alignm identity:
               352
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               62, 79
               

               Conread position:
               7-475
               

               Cow position:
               
               

               Alignm length:
               474
               

               Alignm identity:
               293
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               56, 78
               

               Conread position:
               7-475
               

               Cow position:
               
               

               Alignm length:
               475
               

               Alignm identity:
               307
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               56, 69
               

               Conread position:
               7-549
               

               Cow position:
               
               

               Alignm length:
               552
               

               Alignm identity:
               346
               

               Alignm E-value:
               2.94273e-44
               

               Alignm gaps (pig, cow):
               56, 70
               

               Conread position:
               8-386
               

               Cow position:
               
               

               Alignm length:
               381
               

               Alignm identity:
               237
               

               Alignm E-value:
               2e-31
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               8-531
               

               Cow position:
               
               

               Alignm length:
               534
               

               Alignm identity:
               329
               

               Alignm E-value:
               1e-33
               

               Alignm gaps (pig, cow):
               53, 76
               

               Conread position:
               13-364
               

               Cow position:
               
               

               Alignm length:
               357
               

               Alignm identity:
               233
               

               Alignm E-value:
               1e-34
               

               Alignm gaps (pig, cow):
               61, 45
               

               Conread position:
               13-523
               

               Cow position:
               
               

               Alignm length:
               517
               

               Alignm identity:
               329
               

               Alignm E-value:
               0
               

               Alignm gaps (pig, cow):
               43, 56
               

               Conread position:
               13-534
               

               Cow position:
               
               

               Alignm length:
               531
               

               Alignm identity:
               335
               

               Alignm E-value:
               8.99634e-43
               

               Alignm gaps (pig, cow):
               63, 57
               

               Conread position:
               16-526
               

               Cow position:
               
               

               Alignm length:
               519
               

               Alignm identity:
               313
               

               Alignm E-value:
               7e-30
               

               Alignm gaps (pig, cow):
               5, 70
               

               Conread position:
               22-464
               

               Cow position:
               
               

               Alignm length:
               452
               

               Alignm identity:
               289
               

               Alignm E-value:
               4e-35
               

               Alignm gaps (pig, cow):
               43, 53
               

               Conread position:
               75-532
               

               Cow position:
               
               

               Alignm length:
               464
               

               Alignm identity:
               299
               

               Alignm E-value:
               4.2039e-45
               

               Alignm gaps (pig, cow):
               63, 85
               

               Conread position:
               86-514
               

               Cow position:
               
               

               Alignm length:
               434
               

               Alignm identity:
               267
               

               Alignm E-value:
               7e-31
               

               Alignm gaps (pig, cow):
               65, 81
               
Show alignments to all cow chromosomes.